| # ALTERNATIVE PRODUCTS | FOXP2_MOUSE | Event=Alternative splicing; Named isoforms=2; Name=1; IsoId=P58463-1; Sequence=Displayed; Name=2; IsoId=P58463-2; Sequence=VSP_011540; Note=May be due to a competing acceptor splice site. No experimental confirmation available.; |
| # CCDS | CCDS19918 | -. [P58463-1] |
| # CCDS | CCDS71726 | -. [P58463-2] |
| # ChiTaRS | Foxp2 | mouse |
| # DEVELOPMENTAL STAGE | FOXP2_MOUSE | Expressed in developing lung, neural, intestinal and cardiovascular tissues. Expressed at a high level in the distal airway epithelium and at a low level in the proximal airway epithelium at 12.5 dpc, and restricted to the distal airway epithelium by 14.5 dpc. In the spinal cord, at 12.5 dpc, expressed in a subset of interneurons dorsal to motor neurons. At 16.5 dpc, expression in the brain is observed in the inner intermediate zone of the neopallial cortex and in the developing cerebral hemispheres. In the gastrointestinal system, at 12.5 expressed in the outer mesodermal layer and in the intestinal epithelium. By 16.5 dpc, expression is restricted to the outer longitudinal muscle layer of the intestine and stomach. In the cardiovascular system, at 14.5 dpc, expressed in the outflow tract region of the developing heart. By 16.5 dpc, observed in the outflow tract and atrium, but not in the ventricles. {ECO 0000269|PubMed 11358962, ECO 0000269|PubMed 14516685}. |
| # DOMAIN | FOXP2_MOUSE | The leucine-zipper is required for dimerization and transcriptional repression. {ECO 0000269|PubMed 14701752}. |
| # Ensembl | ENSMUST00000031545 | ENSMUSP00000031545; ENSMUSG00000029563. [P58463-1] |
| # Ensembl | ENSMUST00000115472 | ENSMUSP00000111132; ENSMUSG00000029563. [P58463-2] |
| # Ensembl | ENSMUST00000115477 | ENSMUSP00000111137; ENSMUSG00000029563. [P58463-1] |
| # ExpressionAtlas | P58463 | baseline and differential |
| # FUNCTION | FOXP2_MOUSE | Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Plays a role in synapse formation by regulating SRPX2 levels. {ECO 0000269|PubMed 14701752, ECO 0000269|PubMed 24179158}. |
| # GO_component | GO:0005634 | nucleus; IBA:GO_Central. |
| # GO_function | GO:0000978 | RNA polymerase II core promoter proximal region sequence-specific DNA binding; IMP:NTNU_SB. |
| # GO_function | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding; IMP:NTNU_SB. |
| # GO_function | GO:0003677 | DNA binding; ISS:UniProtKB. |
| # GO_function | GO:0003700 | transcription factor activity, sequence-specific DNA binding; IDA:MGI. |
| # GO_function | GO:0042803 | protein homodimerization activity; ISS:UniProtKB. |
| # GO_function | GO:0046872 | metal ion binding; IEA:UniProtKB-KW. |
| # GO_function | GO:0046982 | protein heterodimerization activity; IPI:MGI. |
| # GO_process | GO:0000122 | negative regulation of transcription from RNA polymerase II promoter; IMP:NTNU_SB. |
| # GO_process | GO:0002053 | positive regulation of mesenchymal cell proliferation; IGI:MGI. |
| # GO_process | GO:0006351 | transcription, DNA-templated; IEA:UniProtKB-KW. |
| # GO_process | GO:0007519 | skeletal muscle tissue development; IGI:MGI. |
| # GO_process | GO:0009791 | post-embryonic development; IMP:MGI. |
| # GO_process | GO:0021549 | cerebellum development; IMP:MGI. |
| # GO_process | GO:0021757 | caudate nucleus development; ISS:UniProtKB. |
| # GO_process | GO:0021758 | putamen development; ISS:UniProtKB. |
| # GO_process | GO:0021987 | cerebral cortex development; IEA:Ensembl. |
| # GO_process | GO:0030324 | lung development; IGI:MGI. |
| # GO_process | GO:0040007 | growth; IMP:MGI. |
| # GO_process | GO:0042297 | vocal learning; IMP:MGI. |
| # GO_process | GO:0043010 | camera-type eye development; IMP:MGI. |
| # GO_process | GO:0045892 | negative regulation of transcription, DNA-templated; IDA:MGI. |
| # GO_process | GO:0048286 | lung alveolus development; IMP:MGI. |
| # GO_process | GO:0048745 | smooth muscle tissue development; IGI:MGI. |
| # GO_process | GO:0050679 | positive regulation of epithelial cell proliferation; IGI:MGI. |
| # GO_process | GO:0060013 | righting reflex; IMP:MGI. |
| # GO_process | GO:0060501 | positive regulation of epithelial cell proliferation involved in lung morphogenesis; IGI:MGI. |
| # GOslim_component | GO:0005634 | nucleus |
| # GOslim_function | GO:0001071 | nucleic acid binding transcription factor activity |
| # GOslim_function | GO:0003674 | molecular_function |
| # GOslim_function | GO:0003677 | DNA binding |
| # GOslim_function | GO:0043167 | ion binding |
| # GOslim_process | GO:0008150 | biological_process |
| # GOslim_process | GO:0009058 | biosynthetic process |
| # GOslim_process | GO:0034641 | cellular nitrogen compound metabolic process |
| # GOslim_process | GO:0040007 | growth |
| # GOslim_process | GO:0048856 | anatomical structure development |
| # GOslim_process | GO:0050877 | neurological system process |
| # Gene3D | 1.10.10.10 | -; 1. |
| # Genevisible | P58463 | MM |
| # InterPro | IPR001766 | Fork_head_dom |
| # InterPro | IPR011991 | WHTH_DNA-bd_dom |
| # InterPro | IPR030456 | TF_fork_head_CS_2 |
| # InterPro | IPR032354 | FOXP-CC |
| # KEGG_Brite | ko03000 | Transcription factors |
| # MGI | MGI:2148705 | Foxp2 |
| # Organism | FOXP2_MOUSE | Mus musculus (Mouse) |
| # PRINTS | PR00053 | FORKHEAD |
| # PROSITE | PS00028 | ZINC_FINGER_C2H2_1 |
| # PROSITE | PS00658 | FORK_HEAD_2 |
| # PROSITE | PS50039 | FORK_HEAD_3 |
| # Pfam | PF00250 | Forkhead |
| # Pfam | PF16159 | FOXP-CC |
| # Proteomes | UP000000589 | Chromosome 6 |
| # RecName | FOXP2_MOUSE | Forkhead box protein P2 |
| # RefSeq | NP_001273536 | NM_001286607.1. [P58463-2] |
| # RefSeq | NP_444472 | NM_053242.4. [P58463-1] |
| # RefSeq | NP_997600 | NM_212435.1. [P58463-1] |
| # SIMILARITY | Contains 1 C2H2-type zinc finger. {ECO | 0000305}. |
| # SIMILARITY | Contains 1 fork-head DNA-binding domain. {ECO:0000255|PROSITE-ProRule | PRU00089}. |
| # SMART | SM00339 | FH |
| # SUBCELLULAR LOCATION | FOXP2_MOUSE | Nucleus {ECO 0000305}. |
| # SUBUNIT | FOXP2_MOUSE | Forms homodimers and heterodimers with FOXP1 and FOXP4. Dimerization is required for DNA-binding (By similarity). Interacts with CTBP1 (PubMed 14701752). Interacts with FOXP1 (By similarity). {ECO 0000250|UniProtKB O15409, ECO 0000269|PubMed 14701752}. |
| # SUPFAM | SSF46785 | SSF46785 |
| # TISSUE SPECIFICITY | FOXP2_MOUSE | Highest expression in lung. Lower expression in spleen, skeletal muscle, brain, kidney and small intestine. |
| # UCSC | uc009ayy | mouse. [P58463-1] |
| # UCSC | uc012eie | mouse. [P58463-2] |
| # eggNOG | COG5025 | LUCA |
| # eggNOG | KOG4385 | Eukaryota |
| BLAST | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/kblast/swissprot:FOXP2_MOUSE |
| COXPRESdb | 114142 | http://coxpresdb.jp/data/gene/114142.shtml |
| CleanEx | MM_FOXP2 | http://www.cleanex.isb-sib.ch/cgi-bin/get_doc?db=cleanex&format=nice&entry=MM_FOXP2 |
| DOI | 10.1016/S0925-4773(03)00116-3 | http://dx.doi.org/10.1016/S0925-4773(03)00116-3 |
| DOI | 10.1038/nature01025 | http://dx.doi.org/10.1038/nature01025 |
| DOI | 10.1074/jbc.M100636200 | http://dx.doi.org/10.1074/jbc.M100636200 |
| DOI | 10.1101/gr.2596504 | http://dx.doi.org/10.1101/gr.2596504 |
| DOI | 10.1126/science.1112014 | http://dx.doi.org/10.1126/science.1112014 |
| DOI | 10.1126/science.1245079 | http://dx.doi.org/10.1126/science.1245079 |
| DOI | 10.1128/MCB.24.2.809-822.2004 | http://dx.doi.org/10.1128/MCB.24.2.809-822.2004 |
| EMBL | AF339106 | http://www.ebi.ac.uk/ena/data/view/AF339106 |
| EMBL | AK082361 | http://www.ebi.ac.uk/ena/data/view/AK082361 |
| EMBL | AY079003 | http://www.ebi.ac.uk/ena/data/view/AY079003 |
| EMBL | BC058960 | http://www.ebi.ac.uk/ena/data/view/BC058960 |
| EMBL | BC062926 | http://www.ebi.ac.uk/ena/data/view/BC062926 |
| Ensembl | ENSMUST00000031545 | http://www.ensembl.org/id/ENSMUST00000031545 |
| Ensembl | ENSMUST00000115472 | http://www.ensembl.org/id/ENSMUST00000115472 |
| Ensembl | ENSMUST00000115477 | http://www.ensembl.org/id/ENSMUST00000115477 |
| G-Links | FOXP2_MOUSE | http://link.g-language.org/FOXP2_MOUSE/format=tsv |
| GO_component | GO:0005634 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005634 |
| GO_function | GO:0000978 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0000978 |
| GO_function | GO:0001078 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0001078 |
| GO_function | GO:0003677 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677 |
| GO_function | GO:0003700 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003700 |
| GO_function | GO:0042803 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042803 |
| GO_function | GO:0046872 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046872 |
| GO_function | GO:0046982 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046982 |
| GO_process | GO:0000122 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0000122 |
| GO_process | GO:0002053 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0002053 |
| GO_process | GO:0006351 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006351 |
| GO_process | GO:0007519 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0007519 |
| GO_process | GO:0009791 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009791 |
| GO_process | GO:0021549 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0021549 |
| GO_process | GO:0021757 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0021757 |
| GO_process | GO:0021758 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0021758 |
| GO_process | GO:0021987 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0021987 |
| GO_process | GO:0030324 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030324 |
| GO_process | GO:0040007 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0040007 |
| GO_process | GO:0042297 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042297 |
| GO_process | GO:0043010 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043010 |
| GO_process | GO:0045892 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0045892 |
| GO_process | GO:0048286 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0048286 |
| GO_process | GO:0048745 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0048745 |
| GO_process | GO:0050679 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0050679 |
| GO_process | GO:0060013 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0060013 |
| GO_process | GO:0060501 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0060501 |
| GOslim_component | GO:0005634 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005634 |
| GOslim_function | GO:0001071 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0001071 |
| GOslim_function | GO:0003674 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674 |
| GOslim_function | GO:0003677 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677 |
| GOslim_function | GO:0043167 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167 |
| GOslim_process | GO:0008150 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150 |
| GOslim_process | GO:0009058 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058 |
| GOslim_process | GO:0034641 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641 |
| GOslim_process | GO:0040007 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0040007 |
| GOslim_process | GO:0048856 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0048856 |
| GOslim_process | GO:0050877 | http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0050877 |
| Gene3D | 1.10.10.10 | http://www.cathdb.info/version/latest/superfamily/1.10.10.10 |
| GeneID | 114142 | http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=114142 |
| GeneTree | ENSGT00800000124014 | http://asia.ensembl.org/Multi/GeneTree/Image?gt=ENSGT00800000124014 |
| HOGENOM | HOG000092089 | http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000092089&db=HOGENOM6 |
| HOVERGEN | HBG051657 | http://pbil.univ-lyon1.fr/cgi-bin/acnuc-ac2tree?query=HBG051657&db=HOVERGEN |
| InParanoid | P58463 | http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P58463 |
| InterPro | IPR001766 | http://www.ebi.ac.uk/interpro/entry/IPR001766 |
| InterPro | IPR011991 | http://www.ebi.ac.uk/interpro/entry/IPR011991 |
| InterPro | IPR030456 | http://www.ebi.ac.uk/interpro/entry/IPR030456 |
| InterPro | IPR032354 | http://www.ebi.ac.uk/interpro/entry/IPR032354 |
| KEGG_Brite | ko03000 | http://www.genome.jp/dbget-bin/www_bget?ko03000 |
| KEGG_Gene | mmu:114142 | http://www.genome.jp/dbget-bin/www_bget?mmu:114142 |
| KEGG_Orthology | KO:K09409 | http://www.genome.jp/dbget-bin/www_bget?KO:K09409 |
| MGI | MGI:2148705 | http://www.informatics.jax.org/searches/accession_report.cgi?id=MGI:2148705 |
| PRINTS | PR00053 | http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00053 |
| PROSITE | PS00028 | http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00028 |
| PROSITE | PS00658 | http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00658 |
| PROSITE | PS50039 | http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50039 |
| PSORT-B | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/kpsortb/swissprot:FOXP2_MOUSE |
| PSORT2 | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/kpsort2/swissprot:FOXP2_MOUSE |
| PSORT | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/kpsort/swissprot:FOXP2_MOUSE |
| Pfam | PF00250 | http://pfam.xfam.org/family/PF00250 |
| Pfam | PF16159 | http://pfam.xfam.org/family/PF16159 |
| Phobius | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/kphobius/swissprot:FOXP2_MOUSE |
| PhylomeDB | P58463 | http://phylomedb.org/?seqid=P58463 |
| ProteinModelPortal | P58463 | http://www.proteinmodelportal.org/query/uniprot/P58463 |
| PubMed | 11358962 | http://www.ncbi.nlm.nih.gov/pubmed/11358962 |
| PubMed | 12192408 | http://www.ncbi.nlm.nih.gov/pubmed/12192408 |
| PubMed | 14516685 | http://www.ncbi.nlm.nih.gov/pubmed/14516685 |
| PubMed | 14701752 | http://www.ncbi.nlm.nih.gov/pubmed/14701752 |
| PubMed | 15489334 | http://www.ncbi.nlm.nih.gov/pubmed/15489334 |
| PubMed | 16141072 | http://www.ncbi.nlm.nih.gov/pubmed/16141072 |
| PubMed | 24179158 | http://www.ncbi.nlm.nih.gov/pubmed/24179158 |
| RefSeq | NP_001273536 | http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_001273536 |
| RefSeq | NP_444472 | http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_444472 |
| RefSeq | NP_997600 | http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_997600 |
| SMART | SM00339 | http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00339 |
| SMR | P58463 | http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P58463 |
| STRING | 10090.ENSMUSP00000031545 | http://string-db.org/newstring_cgi/show_network_section.pl?identifier=10090.ENSMUSP00000031545&targetmode=cogs |
| SUPFAM | SSF46785 | http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF46785 |
| UCSC | uc009ayy | http://genome.ucsc.edu/cgi-bin/hgGene?hgg_gene=uc009ayy&org=rat |
| UCSC | uc012eie | http://genome.ucsc.edu/cgi-bin/hgGene?hgg_gene=uc012eie&org=rat |
| UniGene | Mm.332919 | http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=At&CID=Mm.332919 |
| UniProtKB-AC | P58463 | http://www.uniprot.org/uniprot/P58463 |
| UniProtKB | FOXP2_MOUSE | http://www.uniprot.org/uniprot/FOXP2_MOUSE |
| charge | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/charge/swissprot:FOXP2_MOUSE |
| eggNOG | COG5025 | http://eggnogapi.embl.de/nog_data/html/tree/COG5025 |
| eggNOG | KOG4385 | http://eggnogapi.embl.de/nog_data/html/tree/KOG4385 |
| epestfind | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/epestfind/swissprot:FOXP2_MOUSE |
| garnier | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/garnier/swissprot:FOXP2_MOUSE |
| helixturnhelix | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/helixturnhelix/swissprot:FOXP2_MOUSE |
| hmoment | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/hmoment/swissprot:FOXP2_MOUSE |
| iep | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/iep/swissprot:FOXP2_MOUSE |
| inforesidue | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/inforesidue/swissprot:FOXP2_MOUSE |
| octanol | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/octanol/swissprot:FOXP2_MOUSE |
| pepcoil | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/pepcoil/swissprot:FOXP2_MOUSE |
| pepdigest | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/pepdigest/swissprot:FOXP2_MOUSE |
| pepinfo | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/pepinfo/swissprot:FOXP2_MOUSE |
| pepnet | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/pepnet/swissprot:FOXP2_MOUSE |
| pepstats | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/pepstats/swissprot:FOXP2_MOUSE |
| pepwheel | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/pepwheel/swissprot:FOXP2_MOUSE |
| pepwindow | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/pepwindow/swissprot:FOXP2_MOUSE |
| sigcleave | swissprot:FOXP2_MOUSE | http://rest.g-language.org/emboss/sigcleave/swissprot:FOXP2_MOUSE |