DataBaseIDURL or Descriptions
# BioGrid4261204137
# EcoGeneEG13323ybiR
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IBA:GO_Central.
# GO_functionGO:0005215transporter activity; IBA:GO_Central.
# GO_processGO:0098656anion transmembrane transport; IBA:GO_Central.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0003674molecular_function
# GOslim_processGO:0055085transmembrane transport
# InterProIPR004680Cit_transptr-like_dom
# OrganismYBIR_ECOLIEscherichia coli (strain K12)
# PATRIC32116839VBIEscCol129921_0845
# PIRB64819B64819
# PfamPF03600CitMHS
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYBIR_ECOLIInner membrane protein YbiR
# RefSeqNP_415339NC_000913.3
# RefSeqWP_000056457NZ_LN832404.1
# SIMILARITYBelongs to the CitM (TC 2.A.11) transporter family. {ECO0000305}.
# SUBCELLULAR LOCATIONYBIR_ECOLICell inner membrane; Multi-pass membrane protein.
# TCDB2.A.45.2the arsenite-antimonite (arsb) efflux family
# eggNOGCOG0471LUCA
# eggNOGENOG4105F4PBacteria
BLASTswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YBIR_ECOLI
BioCycECOL316407:JW0802-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0802-MONOMER
BioCycEcoCyc:G6421-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6421-MONOMER
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB3107http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3107
EcoGeneEG13323http://www.ecogene.org/geneInfo.php?eg_id=EG13323
EnsemblBacteriaAAC73905http://www.ensemblgenomes.org/id/AAC73905
EnsemblBacteriaAAC73905http://www.ensemblgenomes.org/id/AAC73905
EnsemblBacteriaBAA35499http://www.ensemblgenomes.org/id/BAA35499
EnsemblBacteriaBAA35499http://www.ensemblgenomes.org/id/BAA35499
EnsemblBacteriaBAA35499http://www.ensemblgenomes.org/id/BAA35499
EnsemblBacteriab0818http://www.ensemblgenomes.org/id/b0818
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0005215http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005215
GO_processGO:0098656http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0098656
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_processGO:0055085http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055085
GeneID945438http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945438
HOGENOMHOG000253850http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000253850&db=HOGENOM6
InParanoidP75788http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P75788
InterProIPR004680http://www.ebi.ac.uk/interpro/entry/IPR004680
KEGG_Geneecj:JW0802http://www.genome.jp/dbget-bin/www_bget?ecj:JW0802
KEGG_Geneeco:b0818http://www.genome.jp/dbget-bin/www_bget?eco:b0818
OMADAIDWHThttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=DAIDWHT
PSORT-Bswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YBIR_ECOLI
PSORT2swissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YBIR_ECOLI
PSORTswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YBIR_ECOLI
PfamPF03600http://pfam.xfam.org/family/PF03600
Phobiusswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YBIR_ECOLI
PhylomeDBP75788http://phylomedb.org/?seqid=P75788
ProteinModelPortalP75788http://www.proteinmodelportal.org/query/uniprot/P75788
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415339http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415339
RefSeqWP_000056457http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000056457
STRING511145.b0818http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0818&targetmode=cogs
TCDB2.A.45.2http://www.tcdb.org/search/result.php?tc=2.A.45.2
UniProtKB-ACP75788http://www.uniprot.org/uniprot/P75788
UniProtKBYBIR_ECOLIhttp://www.uniprot.org/uniprot/YBIR_ECOLI
chargeswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YBIR_ECOLI
eggNOGCOG0471http://eggnogapi.embl.de/nog_data/html/tree/COG0471
eggNOGENOG4105F4Phttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105F4P
epestfindswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YBIR_ECOLI
garnierswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YBIR_ECOLI
helixturnhelixswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YBIR_ECOLI
hmomentswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YBIR_ECOLI
iepswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YBIR_ECOLI
inforesidueswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YBIR_ECOLI
octanolswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YBIR_ECOLI
pepcoilswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YBIR_ECOLI
pepdigestswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YBIR_ECOLI
pepinfoswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YBIR_ECOLI
pepnetswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YBIR_ECOLI
pepstatsswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YBIR_ECOLI
pepwheelswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YBIR_ECOLI
pepwindowswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YBIR_ECOLI
sigcleaveswissprot:YBIR_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YBIR_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426170110
# CDDcd06261TM_PBP2
# EcoGeneEG10555malF
# FUNCTIONMALF_ECOLIPart of the binding-protein-dependent transport system for maltose; probably responsible for the translocation of the substrate across the membrane.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0005887integral component of plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016020membrane; IDA:UniProtKB.
# GO_componentGO:0043190ATP-binding cassette (ABC) transporter complex; IDA:EcoCyc.
# GO_componentGO:0055052ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing; IBA:GO_Central.
# GO_componentGO:1990060maltose transport complex; IDA:EcoCyc.
# GO_functionGO:0015423maltose-transporting ATPase activity; IDA:EcoCyc.
# GO_processGO:0006974cellular response to DNA damage stimulus; IEP:EcoliWiki.
# GO_processGO:0015768maltose transport; IDA:EcoCyc.
# GO_processGO:0042956maltodextrin transport; IDA:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_componentGO:0043234protein complex
# GOslim_functionGO:0016887ATPase activity
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# GOslim_processGO:0006950response to stress
# Gene3D1.10.3720.10-; 1.
# INTERACTIONMALF_ECOLIP0AEX9 malE; NbExp=2; IntAct=EBI-1118919, EBI-369910;
# IntActP029165
# InterProIPR000515MetI-like
# InterProIPR029345MalF_P2
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00194 Maltose/maltodextrin transport system
# KEGG_Briteko02000 M00197 Putative fructooligosaccharide transport system
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02010ABC transporters
# MISCELLANEOUSMALF_ECOLIWhen MalF EAA loop mutations are made concomitantly with MalG EAA loop mutations, a complete loss of transport and complex formation is observed, except for the Gly-407. This suggests that the MalF-MalG interaction may be important for the proper assembly and also for the correct function of the transporter.
# OrganismMALF_ECOLIEscherichia coli (strain K12)
# PATRIC32123599VBIEscCol129921_4148
# PDB2R6GX-ray; 2.80 A; F=1-514
# PDB3FH6X-ray; 4.50 A; F/H=36-514
# PDB3PUVX-ray; 2.40 A; F=1-514
# PDB3PUWX-ray; 2.30 A; F=1-514
# PDB3PUXX-ray; 2.30 A; F=1-514
# PDB3PUYX-ray; 3.10 A; F=1-514
# PDB3PUZX-ray; 2.90 A; F=1-514
# PDB3PV0X-ray; 3.10 A; F=1-514
# PDB3RLFX-ray; 2.20 A; F=1-514
# PDB4JBWX-ray; 3.91 A; F/H=1-514
# PDB4KHZX-ray; 2.90 A; F=1-514
# PDB4KI0X-ray; 2.38 A; F=1-514
# PIRA03414MMECMF
# PROSITEPS50928ABC_TM1
# PfamPF00528BPD_transp_1
# PfamPF14785MalF_P2
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameMALF_ECOLIMaltose transport system permease protein MalF
# RefSeqNP_418457NC_000913.3
# RefSeqWP_001297290NZ_LN832404.1
# SIMILARITYBelongs to the binding-protein-dependent transport system permease family. MalFG subfamily. {ECO0000305}.
# SIMILARITYContains 1 ABC transmembrane type-1 domain. {ECO:0000255|PROSITE-ProRulePRU00441}.
# SUBCELLULAR LOCATIONMALF_ECOLICell inner membrane {ECO 0000269|PubMed 18456666}; Multi-pass membrane protein {ECO 0000255|PROSITE-ProRule PRU00441, ECO 0000269|PubMed 18456666}; Periplasmic side {ECO 0000269|PubMed 18456666}. Note=A substantial portion of it protrudes into the periplasmic space; inserts in an SRP- and Sec- dependent, YidC-independent fashion into the membrane.
# SUBUNITMALF_ECOLIThe complex is composed of two ATP-binding proteins (MalK), two transmembrane proteins (MalG and MalF) and a solute- binding protein (MalE). Protein stability and stable complex formation require YidC. {ECO 0000269|PubMed 10809785, ECO 0000269|PubMed 18456666}.
# SUPFAMSSF161098SSF161098
# TCDB3.A.1.1the atp-binding cassette (abc) superfamily
# eggNOGCOG1175LUCA
# eggNOGENOG4105D56Bacteria
BLASTswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:MALF_ECOLI
BioCycECOL316407:JW3993-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3993-MONOMER
BioCycEcoCyc:MALF-MONOMERhttp://biocyc.org/getid?id=EcoCyc:MALF-MONOMER
BioCycMetaCyc:MALF-MONOMERhttp://biocyc.org/getid?id=MetaCyc:MALF-MONOMER
COGCOG1175http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1175
DIPDIP-10142Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-10142N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.87.19.7574http://dx.doi.org/10.1073/pnas.87.19.7574
DOI10.1074/jbc.275.20.15526http://dx.doi.org/10.1074/jbc.275.20.15526
DOI10.1074/jbc.M801481200http://dx.doi.org/10.1074/jbc.M801481200
DOI10.1093/emboj/16.11.3066http://dx.doi.org/10.1093/emboj/16.11.3066
DOI10.1093/nar/21.23.5408http://dx.doi.org/10.1093/nar/21.23.5408
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLJ01648http://www.ebi.ac.uk/ena/data/view/J01648
EMBLU00006http://www.ebi.ac.uk/ena/data/view/U00006
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX02871http://www.ebi.ac.uk/ena/data/view/X02871
EchoBASEEB0550http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0550
EcoGeneEG10555http://www.ecogene.org/geneInfo.php?eg_id=EG10555
EnsemblBacteriaAAC77003http://www.ensemblgenomes.org/id/AAC77003
EnsemblBacteriaAAC77003http://www.ensemblgenomes.org/id/AAC77003
EnsemblBacteriaBAE78035http://www.ensemblgenomes.org/id/BAE78035
EnsemblBacteriaBAE78035http://www.ensemblgenomes.org/id/BAE78035
EnsemblBacteriaBAE78035http://www.ensemblgenomes.org/id/BAE78035
EnsemblBacteriab4033http://www.ensemblgenomes.org/id/b4033
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0005887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005887
GO_componentGO:0016020http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016020
GO_componentGO:0043190http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043190
GO_componentGO:0055052http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055052
GO_componentGO:1990060http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:1990060
GO_functionGO:0015423http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015423
GO_processGO:0006974http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006974
GO_processGO:0015768http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015768
GO_processGO:0042956http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042956
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_componentGO:0043234http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043234
GOslim_functionGO:0016887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016887
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0006950http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006950
Gene3D1.10.3720.10http://www.cathdb.info/version/latest/superfamily/1.10.3720.10
GeneID948532http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=948532
HOGENOMHOG000239267http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000239267&db=HOGENOM6
InParanoidP02916http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P02916
IntActP02916http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P02916*
InterProIPR000515http://www.ebi.ac.uk/interpro/entry/IPR000515
InterProIPR029345http://www.ebi.ac.uk/interpro/entry/IPR029345
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW3993http://www.genome.jp/dbget-bin/www_bget?ecj:JW3993
KEGG_Geneeco:b4033http://www.genome.jp/dbget-bin/www_bget?eco:b4033
KEGG_OrthologyKO:K10109http://www.genome.jp/dbget-bin/www_bget?KO:K10109
KEGG_Pathwayko02010http://www.genome.jp/kegg-bin/show_pathway?ko02010
OMATMILIVNhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=TMILIVN
PDB2R6Ghttp://www.ebi.ac.uk/pdbe-srv/view/entry/2R6G
PDB3FH6http://www.ebi.ac.uk/pdbe-srv/view/entry/3FH6
PDB3PUVhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3PUV
PDB3PUWhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3PUW
PDB3PUXhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3PUX
PDB3PUYhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3PUY
PDB3PUZhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3PUZ
PDB3PV0http://www.ebi.ac.uk/pdbe-srv/view/entry/3PV0
PDB3RLFhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3RLF
PDB4JBWhttp://www.ebi.ac.uk/pdbe-srv/view/entry/4JBW
PDB4KHZhttp://www.ebi.ac.uk/pdbe-srv/view/entry/4KHZ
PDB4KI0http://www.ebi.ac.uk/pdbe-srv/view/entry/4KI0
PDBsum2R6Ghttp://www.ebi.ac.uk/pdbsum/2R6G
PDBsum3FH6http://www.ebi.ac.uk/pdbsum/3FH6
PDBsum3PUVhttp://www.ebi.ac.uk/pdbsum/3PUV
PDBsum3PUWhttp://www.ebi.ac.uk/pdbsum/3PUW
PDBsum3PUXhttp://www.ebi.ac.uk/pdbsum/3PUX
PDBsum3PUYhttp://www.ebi.ac.uk/pdbsum/3PUY
PDBsum3PUZhttp://www.ebi.ac.uk/pdbsum/3PUZ
PDBsum3PV0http://www.ebi.ac.uk/pdbsum/3PV0
PDBsum3RLFhttp://www.ebi.ac.uk/pdbsum/3RLF
PDBsum4JBWhttp://www.ebi.ac.uk/pdbsum/4JBW
PDBsum4KHZhttp://www.ebi.ac.uk/pdbsum/4KHZ
PDBsum4KI0http://www.ebi.ac.uk/pdbsum/4KI0
PROSITEPS50928http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50928
PSORT-Bswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:MALF_ECOLI
PSORT2swissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:MALF_ECOLI
PSORTswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:MALF_ECOLI
PfamPF00528http://pfam.xfam.org/family/PF00528
PfamPF14785http://pfam.xfam.org/family/PF14785
Phobiusswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:MALF_ECOLI
PhylomeDBP02916http://phylomedb.org/?seqid=P02916
ProteinModelPortalP02916http://www.proteinmodelportal.org/query/uniprot/P02916
PubMed10809785http://www.ncbi.nlm.nih.gov/pubmed/10809785
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16453726http://www.ncbi.nlm.nih.gov/pubmed/16453726
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed18456666http://www.ncbi.nlm.nih.gov/pubmed/18456666
PubMed1915262http://www.ncbi.nlm.nih.gov/pubmed/1915262
PubMed2170984http://www.ncbi.nlm.nih.gov/pubmed/2170984
PubMed3000770http://www.ncbi.nlm.nih.gov/pubmed/3000770
PubMed6088520http://www.ncbi.nlm.nih.gov/pubmed/6088520
PubMed8265357http://www.ncbi.nlm.nih.gov/pubmed/8265357
PubMed8636026http://www.ncbi.nlm.nih.gov/pubmed/8636026
PubMed9214624http://www.ncbi.nlm.nih.gov/pubmed/9214624
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9401026http://www.ncbi.nlm.nih.gov/pubmed/9401026
PubMed9529892http://www.ncbi.nlm.nih.gov/pubmed/9529892
RefSeqNP_418457http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_418457
RefSeqWP_001297290http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001297290
SMRP02916http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P02916
STRING511145.b4033http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b4033&targetmode=cogs
STRINGCOG1175http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1175&targetmode=cogs
SUPFAMSSF161098http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF161098
TCDB3.A.1.1http://www.tcdb.org/search/result.php?tc=3.A.1.1
UniProtKB-ACP02916http://www.uniprot.org/uniprot/P02916
UniProtKBMALF_ECOLIhttp://www.uniprot.org/uniprot/MALF_ECOLI
chargeswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:MALF_ECOLI
eggNOGCOG1175http://eggnogapi.embl.de/nog_data/html/tree/COG1175
eggNOGENOG4105D56http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105D56
epestfindswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:MALF_ECOLI
garnierswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:MALF_ECOLI
helixturnhelixswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:MALF_ECOLI
hmomentswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:MALF_ECOLI
iepswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:MALF_ECOLI
inforesidueswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:MALF_ECOLI
octanolswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:MALF_ECOLI
pepcoilswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:MALF_ECOLI
pepdigestswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:MALF_ECOLI
pepinfoswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:MALF_ECOLI
pepnetswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:MALF_ECOLI
pepstatsswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:MALF_ECOLI
pepwheelswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:MALF_ECOLI
pepwindowswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:MALF_ECOLI
sigcleaveswissprot:MALF_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:MALF_ECOLI
DataBaseIDURL or Descriptions
# BioGrid4260155258
# EcoGeneEG13376mppA
# FUNCTIONMPPA_ECOLIEssential for the uptake of the murein peptide L-alanyl- gamma-D-glutamyl-meso-diaminopimelate. Also transports some alpha- linked peptides such as Pro-Phe-Lys with low affinity. The transport is effected by the oligopeptide permease system.
# GO_componentGO:0030288outer membrane-bounded periplasmic space; IDA:EcoCyc.
# GO_componentGO:0042597periplasmic space; IDA:EcoliWiki.
# GO_componentGO:0043190ATP-binding cassette (ABC) transporter complex; IEA:InterPro.
# GO_functionGO:0015197peptide transporter activity; IBA:GO_Central.
# GO_processGO:0015031protein transport; IEA:UniProtKB-KW.
# GO_processGO:0042939tripeptide transport; IMP:EcoliWiki.
# GO_processGO:0055085transmembrane transport; IEA:InterPro.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0043234protein complex
# GOslim_functionGO:0003674molecular_function
# GOslim_processGO:0006810transport
# GOslim_processGO:0055085transmembrane transport
# InterProIPR000914SBP_5_dom
# InterProIPR023765SBP_5_CS
# InterProIPR030678Peptide/Ni-bd
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00439 Oligopeptide transport system
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02010ABC transporters
# OrganismMPPA_ECOLIEscherichia coli (strain K12)
# PATRIC32117934VBIEscCol129921_1387
# PDB3O9PX-ray; 2.07 A; A=23-537
# PDB4TOZX-ray; 1.50 A; A/B=23-537
# PIRD64882D64882
# PIRSFPIRSF002741MppA
# PROSITEPS01040SBP_BACTERIAL_5
# PfamPF00496SBP_bac_5
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameMPPA_ECOLIPeriplasmic murein peptide-binding protein
# RefSeqNP_415845NC_000913.3
# RefSeqWP_000683020NZ_LN832404.1
# SIMILARITYBelongs to the bacterial solute-binding protein 5 family. {ECO0000305}.
# SUBCELLULAR LOCATIONMPPA_ECOLIPeriplasm.
# TCDB3.A.1.5.41the atp-binding cassette (abc) superfamily
# TCDB3.A.1.5the atp-binding cassette (abc) superfamily
# eggNOGCOG4166LUCA
# eggNOGENOG4107QSIBacteria
BLASTswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:MPPA_ECOLI
BioCycECOL316407:JW1322-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1322-MONOMER
BioCycEcoCyc:G6665-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6665-MONOMER
BioCycMetaCyc:G6665-MONOMERhttp://biocyc.org/getid?id=MetaCyc:G6665-MONOMER
COGCOG4166http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4166
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU88242http://www.ebi.ac.uk/ena/data/view/U88242
EchoBASEEB3158http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3158
EcoGeneEG13376http://www.ecogene.org/geneInfo.php?eg_id=EG13376
EnsemblBacteriaAAC74411http://www.ensemblgenomes.org/id/AAC74411
EnsemblBacteriaAAC74411http://www.ensemblgenomes.org/id/AAC74411
EnsemblBacteriaBAA14922http://www.ensemblgenomes.org/id/BAA14922
EnsemblBacteriaBAA14922http://www.ensemblgenomes.org/id/BAA14922
EnsemblBacteriaBAA14922http://www.ensemblgenomes.org/id/BAA14922
EnsemblBacteriab1329http://www.ensemblgenomes.org/id/b1329
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0030288http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030288
GO_componentGO:0042597http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042597
GO_componentGO:0043190http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043190
GO_functionGO:0015197http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015197
GO_processGO:0015031http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015031
GO_processGO:0042939http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042939
GO_processGO:0055085http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055085
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0043234http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043234
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0055085http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055085
GeneID945951http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945951
HOGENOMHOG000179191http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000179191&db=HOGENOM6
InParanoidP77348http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P77348
InterProIPR000914http://www.ebi.ac.uk/interpro/entry/IPR000914
InterProIPR023765http://www.ebi.ac.uk/interpro/entry/IPR023765
InterProIPR030678http://www.ebi.ac.uk/interpro/entry/IPR030678
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW1322http://www.genome.jp/dbget-bin/www_bget?ecj:JW1322
KEGG_Geneeco:b1329http://www.genome.jp/dbget-bin/www_bget?eco:b1329
KEGG_OrthologyKO:K15580http://www.genome.jp/dbget-bin/www_bget?KO:K15580
KEGG_Pathwayko02010http://www.genome.jp/kegg-bin/show_pathway?ko02010
OMAIDRRVMAhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=IDRRVMA
PDB3O9Phttp://www.ebi.ac.uk/pdbe-srv/view/entry/3O9P
PDB4TOZhttp://www.ebi.ac.uk/pdbe-srv/view/entry/4TOZ
PDBsum3O9Phttp://www.ebi.ac.uk/pdbsum/3O9P
PDBsum4TOZhttp://www.ebi.ac.uk/pdbsum/4TOZ
PROSITEPS01040http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS01040
PSORT-Bswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:MPPA_ECOLI
PSORT2swissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:MPPA_ECOLI
PSORTswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:MPPA_ECOLI
PfamPF00496http://pfam.xfam.org/family/PF00496
Phobiusswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:MPPA_ECOLI
PhylomeDBP77348http://phylomedb.org/?seqid=P77348
ProteinModelPortalP77348http://www.proteinmodelportal.org/query/uniprot/P77348
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9495761http://www.ncbi.nlm.nih.gov/pubmed/9495761
RefSeqNP_415845http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415845
RefSeqWP_000683020http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000683020
SMRP77348http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P77348
STRING511145.b1329http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1329&targetmode=cogs
STRINGCOG4166http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG4166&targetmode=cogs
SWISS-2DPAGEP77348http://world-2dpage.expasy.org/swiss-2dpage/protein/ac=P77348
TCDB3.A.1.5.41http://www.tcdb.org/search/result.php?tc=3.A.1.5.41
TCDB3.A.1.5http://www.tcdb.org/search/result.php?tc=3.A.1.5
UniProtKB-ACP77348http://www.uniprot.org/uniprot/P77348
UniProtKBMPPA_ECOLIhttp://www.uniprot.org/uniprot/MPPA_ECOLI
chargeswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:MPPA_ECOLI
eggNOGCOG4166http://eggnogapi.embl.de/nog_data/html/tree/COG4166
eggNOGENOG4107QSIhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4107QSI
epestfindswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:MPPA_ECOLI
garnierswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:MPPA_ECOLI
helixturnhelixswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:MPPA_ECOLI
hmomentswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:MPPA_ECOLI
iepswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:MPPA_ECOLI
inforesidueswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:MPPA_ECOLI
octanolswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:MPPA_ECOLI
pepcoilswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:MPPA_ECOLI
pepdigestswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:MPPA_ECOLI
pepinfoswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:MPPA_ECOLI
pepnetswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:MPPA_ECOLI
pepstatsswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:MPPA_ECOLI
pepwheelswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:MPPA_ECOLI
pepwindowswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:MPPA_ECOLI
sigcleaveswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:MPPA_ECOLI
DataBaseIDURL or Descriptions
# CAUTIONCould be the product of a pseudogene. {ECO0000305}.
# CAUTIONThis is a truncated ORF. Compared to E.coli W3110, the strain MG1655 has an apparent deletion of about 6 kb which seems to truncate this putative ArsB homolog. {ECO0000305}.
# CDDcd01118ArsB_permease
# EcoGeneEG13208yfjV
# FUNCTIONYFJV_ECOLIInvolved in arsenical resistance. Thought to form the channel of an arsenite pump (By similarity). {ECO 0000250}.
# GO_componentGO:0005887integral component of plasma membrane; IBA:GO_Central.
# GO_functionGO:0005215transporter activity; IBA:GO_Central.
# GO_functionGO:0015105arsenite transmembrane transporter activity; IEA:InterPro.
# GO_processGO:0015700arsenite transport; IEA:InterPro.
# GO_processGO:0046685response to arsenic-containing substance; IEA:UniProtKB-KW.
# GO_processGO:0098656anion transmembrane transport; IBA:GO_Central.
# GOslim_componentGO:0005575cellular_component
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# GOslim_processGO:0008150biological_process
# GOslim_processGO:0055085transmembrane transport
# InterProIPR000802Arsenical_pump_ArsB
# OrganismYFJV_ECOLIEscherichia coli (strain K12)
# PIRT08650T08650
# PIRT08651T08651
# PIRT08652T08652
# PRINTSPR00758ARSENICPUMP
# PfamPF02040ArsB
# ProteomesUP000000625Chromosome
# RecNameYFJV_ECOLIPutative arsenical pump membrane protein
# SEQUENCE CAUTIONSequence=AAA79807.1; Type=Erroneous initiation; Evidence={ECO0000305};
# SIMILARITYBelongs to the ArsB family. {ECO0000305}.
# SUBCELLULAR LOCATIONYFJV_ECOLICell inner membrane {ECO 0000305}; Multi- pass membrane protein {ECO 0000305}.
# TIGRFAMsTIGR009352a45
# eggNOGCOG1055LUCA
BLASTswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YFJV_ECOLI
BioCycEcoCyc:G7375-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G7375-MONOMER
DIPDIP-12087Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-12087N
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU36840http://www.ebi.ac.uk/ena/data/view/U36840
EMBLU36840http://www.ebi.ac.uk/ena/data/view/U36840
EMBLU36840http://www.ebi.ac.uk/ena/data/view/U36840
EchoBASEEB3000http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3000
EcoGeneEG13208http://www.ecogene.org/geneInfo.php?eg_id=EG13208
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005887
GO_functionGO:0005215http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005215
GO_functionGO:0015105http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015105
GO_processGO:0015700http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015700
GO_processGO:0046685http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046685
GO_processGO:0098656http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0098656
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
GOslim_processGO:0055085http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055085
HOGENOMHOG000005271http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000005271&db=HOGENOM6
InParanoidP52137http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P52137
IntActP52137http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P52137*
InterProIPR000802http://www.ebi.ac.uk/interpro/entry/IPR000802
OMAFVEYATHhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=FVEYATH
PRINTSPR00758http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00758
PSORT-Bswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YFJV_ECOLI
PSORT2swissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YFJV_ECOLI
PSORTswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YFJV_ECOLI
PfamPF02040http://pfam.xfam.org/family/PF02040
Phobiusswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YFJV_ECOLI
PhylomeDBP52137http://phylomedb.org/?seqid=P52137
ProteinModelPortalP52137http://www.proteinmodelportal.org/query/uniprot/P52137
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
STRING316407.85675502http://string-db.org/newstring_cgi/show_network_section.pl?identifier=316407.85675502&targetmode=cogs
TIGRFAMsTIGR00935http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00935
UniProtKB-ACP52137http://www.uniprot.org/uniprot/P52137
UniProtKBYFJV_ECOLIhttp://www.uniprot.org/uniprot/YFJV_ECOLI
chargeswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YFJV_ECOLI
eggNOGCOG1055http://eggnogapi.embl.de/nog_data/html/tree/COG1055
epestfindswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YFJV_ECOLI
garnierswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YFJV_ECOLI
helixturnhelixswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YFJV_ECOLI
hmomentswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YFJV_ECOLI
iepswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YFJV_ECOLI
inforesidueswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YFJV_ECOLI
octanolswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YFJV_ECOLI
pepcoilswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YFJV_ECOLI
pepdigestswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YFJV_ECOLI
pepinfoswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YFJV_ECOLI
pepnetswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YFJV_ECOLI
pepstatsswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YFJV_ECOLI
pepwheelswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YFJV_ECOLI
pepwindowswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YFJV_ECOLI
sigcleaveswissprot:YFJV_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YFJV_ECOLI
DataBaseIDURL or Descriptions
# BioGrid42600928
# CDDcd06261TM_PBP2
# EcoGeneEG10751potC
# FUNCTIONPOTC_ECOLIRequired for the activity of the bacterial periplasmic transport system of putrescine and spermidine.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0015417polyamine-transporting ATPase activity; IMP:EcoCyc.
# GO_processGO:0015846polyamine transport; IMP:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0016887ATPase activity
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# Gene3D1.10.3720.10-; 1.
# InterProIPR000515MetI-like
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00299 Spermidine/putrescine transport system
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02010ABC transporters
# OrganismPOTC_ECOLIEscherichia coli (strain K12)
# PATRIC32117495VBIEscCol129921_1170
# PIRC40840C40840
# PROSITEPS50928ABC_TM1
# PfamPF00528BPD_transp_1
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNamePOTC_ECOLISpermidine/putrescine transport system permease protein PotC
# RefSeqNP_415642NC_000913.3
# RefSeqWP_000580316NZ_LN832404.1
# SIMILARITYBelongs to the binding-protein-dependent transport system permease family. CysTW subfamily. {ECO0000305}.
# SIMILARITYContains 1 ABC transmembrane type-1 domain. {ECO:0000255|PROSITE-ProRulePRU00441}.
# SUBCELLULAR LOCATIONPOTC_ECOLICell inner membrane {ECO 0000269|PubMed 15919996}; Multi-pass membrane protein {ECO 0000255|PROSITE-ProRule PRU00441, ECO 0000269|PubMed 15919996}.
# SUPFAMSSF161098SSF161098
# TCDB3.A.1.11the atp-binding cassette (abc) superfamily
# eggNOGCOG1177LUCA
# eggNOGENOG4105D38Bacteria
BLASTswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:POTC_ECOLI
BioCycECOL316407:JW1110-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1110-MONOMER
BioCycEcoCyc:POTC-MONOMERhttp://biocyc.org/getid?id=EcoCyc:POTC-MONOMER
BioCycMetaCyc:POTC-MONOMERhttp://biocyc.org/getid?id=MetaCyc:POTC-MONOMER
COGCOG1177http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1177
DIPDIP-48152Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-48152N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM64519http://www.ebi.ac.uk/ena/data/view/M64519
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB0744http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0744
EcoGeneEG10751http://www.ecogene.org/geneInfo.php?eg_id=EG10751
EnsemblBacteriaAAC74208http://www.ensemblgenomes.org/id/AAC74208
EnsemblBacteriaAAC74208http://www.ensemblgenomes.org/id/AAC74208
EnsemblBacteriaBAA35944http://www.ensemblgenomes.org/id/BAA35944
EnsemblBacteriaBAA35944http://www.ensemblgenomes.org/id/BAA35944
EnsemblBacteriaBAA35944http://www.ensemblgenomes.org/id/BAA35944
EnsemblBacteriab1124http://www.ensemblgenomes.org/id/b1124
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0015417http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015417
GO_processGO:0015846http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015846
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0016887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016887
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
Gene3D1.10.3720.10http://www.cathdb.info/version/latest/superfamily/1.10.3720.10
GeneID945691http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945691
HOGENOMHOG000263700http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000263700&db=HOGENOM6
InParanoidP0AFK6http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AFK6
IntActP0AFK6http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AFK6*
InterProIPR000515http://www.ebi.ac.uk/interpro/entry/IPR000515
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW1110http://www.genome.jp/dbget-bin/www_bget?ecj:JW1110
KEGG_Geneeco:b1124http://www.genome.jp/dbget-bin/www_bget?eco:b1124
KEGG_OrthologyKO:K11070http://www.genome.jp/dbget-bin/www_bget?KO:K11070
KEGG_Pathwayko02010http://www.genome.jp/kegg-bin/show_pathway?ko02010
MINTMINT-1315836http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1315836
OMANWYSLLMhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=NWYSLLM
PROSITEPS50928http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50928
PSORT-Bswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:POTC_ECOLI
PSORT2swissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:POTC_ECOLI
PSORTswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:POTC_ECOLI
PfamPF00528http://pfam.xfam.org/family/PF00528
Phobiusswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:POTC_ECOLI
PhylomeDBP0AFK6http://phylomedb.org/?seqid=P0AFK6
ProteinModelPortalP0AFK6http://www.proteinmodelportal.org/query/uniprot/P0AFK6
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed1939142http://www.ncbi.nlm.nih.gov/pubmed/1939142
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415642http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415642
RefSeqWP_000580316http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000580316
STRING511145.b1124http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1124&targetmode=cogs
STRINGCOG1177http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1177&targetmode=cogs
SUPFAMSSF161098http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF161098
TCDB3.A.1.11http://www.tcdb.org/search/result.php?tc=3.A.1.11
UniProtKB-ACP0AFK6http://www.uniprot.org/uniprot/P0AFK6
UniProtKBPOTC_ECOLIhttp://www.uniprot.org/uniprot/POTC_ECOLI
chargeswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:POTC_ECOLI
eggNOGCOG1177http://eggnogapi.embl.de/nog_data/html/tree/COG1177
eggNOGENOG4105D38http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105D38
epestfindswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:POTC_ECOLI
garnierswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:POTC_ECOLI
helixturnhelixswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:POTC_ECOLI
hmomentswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:POTC_ECOLI
iepswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:POTC_ECOLI
inforesidueswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:POTC_ECOLI
octanolswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:POTC_ECOLI
pepcoilswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:POTC_ECOLI
pepdigestswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:POTC_ECOLI
pepinfoswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:POTC_ECOLI
pepnetswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:POTC_ECOLI
pepstatsswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:POTC_ECOLI
pepwheelswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:POTC_ECOLI
pepwindowswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:POTC_ECOLI
sigcleaveswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:POTC_ECOLI
DataBaseIDURL or Descriptions
# BioGrid4262124122
# EcoGeneEG14006ynjD
# FUNCTIONYNJD_ECOLIProbably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system.
# GO_functionGO:0005524ATP binding; IEA:UniProtKB-KW.
# GO_functionGO:0016887ATPase activity; IEA:InterPro.
# GO_processGO:0006810transport; IEA:UniProtKB-KW.
# GOslim_functionGO:0016887ATPase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006810transport
# Gene3D3.40.50.300-; 1.
# InterProIPR003439ABC_transporter-like
# InterProIPR003593AAA+_ATPase
# InterProIPR017871ABC_transporter_CS
# InterProIPR027417P-loop_NTPase
# KEGG_Briteko00002KEGG pathway modules
# KEGG_Briteko02000 M00192 Putative thiamine transport system
# KEGG_Briteko02000 Transporters
# OrganismYNJD_ECOLIEscherichia coli (strain K12)
# PATRIC32118823VBIEscCol129921_1829
# PIRD64935D64935
# PROSITEPS00211ABC_TRANSPORTER_1
# PROSITEPS50893ABC_TRANSPORTER_2
# PfamPF00005ABC_tran
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYNJD_ECOLIUncharacterized ABC transporter ATP-binding protein YnjD
# RefSeqNP_416270NC_000913.3
# RefSeqWP_001300558NZ_LN832404.1
# SIMILARITYBelongs to the ABC transporter superfamily. {ECO0000305}.
# SIMILARITYContains 1 ABC transporter domain. {ECO:0000255|PROSITE-ProRulePRU00434}.
# SMARTSM00382AAA
# SUPFAMSSF52540SSF52540
# eggNOGCOG4136LUCA
# eggNOGENOG4108VGWBacteria
BLASTswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YNJD_ECOLI
BioCycECOL316407:JW5286-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW5286-MONOMER
BioCycEcoCyc:YNJD-MONOMERhttp://biocyc.org/getid?id=EcoCyc:YNJD-MONOMER
COGCOG4136http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4136
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB3762http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3762
EcoGeneEG14006http://www.ecogene.org/geneInfo.php?eg_id=EG14006
EnsemblBacteriaAAC74826http://www.ensemblgenomes.org/id/AAC74826
EnsemblBacteriaAAC74826http://www.ensemblgenomes.org/id/AAC74826
EnsemblBacteriaBAA15547http://www.ensemblgenomes.org/id/BAA15547
EnsemblBacteriaBAA15547http://www.ensemblgenomes.org/id/BAA15547
EnsemblBacteriaBAA15547http://www.ensemblgenomes.org/id/BAA15547
EnsemblBacteriab1756http://www.ensemblgenomes.org/id/b1756
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_functionGO:0005524http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005524
GO_functionGO:0016887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016887
GO_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_functionGO:0016887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016887
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
Gene3D3.40.50.300http://www.cathdb.info/version/latest/superfamily/3.40.50.300
GeneID944965http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=944965
InParanoidP76909http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P76909
InterProIPR003439http://www.ebi.ac.uk/interpro/entry/IPR003439
InterProIPR003593http://www.ebi.ac.uk/interpro/entry/IPR003593
InterProIPR017871http://www.ebi.ac.uk/interpro/entry/IPR017871
InterProIPR027417http://www.ebi.ac.uk/interpro/entry/IPR027417
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW5286http://www.genome.jp/dbget-bin/www_bget?ecj:JW5286
KEGG_Geneeco:b1756http://www.genome.jp/dbget-bin/www_bget?eco:b1756
KEGG_OrthologyKO:K05779http://www.genome.jp/dbget-bin/www_bget?KO:K05779
OMAPLFREVNhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=PLFREVN
PROSITEPS00211http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00211
PROSITEPS50893http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50893
PSORT-Bswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YNJD_ECOLI
PSORT2swissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YNJD_ECOLI
PSORTswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YNJD_ECOLI
PfamPF00005http://pfam.xfam.org/family/PF00005
Phobiusswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YNJD_ECOLI
PhylomeDBP76909http://phylomedb.org/?seqid=P76909
ProteinModelPortalP76909http://www.proteinmodelportal.org/query/uniprot/P76909
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416270http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416270
RefSeqWP_001300558http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001300558
SMARTSM00382http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00382
SMRP76909http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P76909
STRING511145.b1756http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1756&targetmode=cogs
STRINGCOG4136http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG4136&targetmode=cogs
SUPFAMSSF52540http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF52540
UniProtKB-ACP76909http://www.uniprot.org/uniprot/P76909
UniProtKBYNJD_ECOLIhttp://www.uniprot.org/uniprot/YNJD_ECOLI
chargeswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YNJD_ECOLI
eggNOGCOG4136http://eggnogapi.embl.de/nog_data/html/tree/COG4136
eggNOGENOG4108VGWhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4108VGW
epestfindswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YNJD_ECOLI
garnierswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YNJD_ECOLI
helixturnhelixswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YNJD_ECOLI
hmomentswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YNJD_ECOLI
iepswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YNJD_ECOLI
inforesidueswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YNJD_ECOLI
octanolswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YNJD_ECOLI
pepcoilswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YNJD_ECOLI
pepdigestswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YNJD_ECOLI
pepinfoswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YNJD_ECOLI
pepnetswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YNJD_ECOLI
pepstatsswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YNJD_ECOLI
pepwheelswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YNJD_ECOLI
pepwindowswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YNJD_ECOLI
sigcleaveswissprot:YNJD_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YNJD_ECOLI
DataBaseIDURL or Descriptions
# AltNameXanthosine transporter {ECO0000305}
# BIOPHYSICOCHEMICAL PROPERTIESKinetic parameters: KM=136 uM for xanthosine {ECO0000269|PubMed:7559336};
# BioGrid426200618
# DISRUPTION PHENOTYPEMutant grows very slowly on xanthosine. {ECO:0000269|PubMed7559336}.
# ENZYME REGULATIONTransport is abolished by 2,4-dinitrophenol. {ECO:0000269|PubMed7559336}.
# EcoGeneEG13159xapB
# FUNCTIONXAPB_ECOLIUptake of xanthosine. Driven by a proton motive force. Can also transport other nucleosides such as inosine, adenosine, cytidine, uridine and thymidine. {ECO 0000269|PubMed 7559336}.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016020membrane; IDA:EcoliWiki.
# GO_componentGO:0016021integral component of membrane; ISS:EcoliWiki.
# GO_functionGO:0005337nucleoside transmembrane transporter activity; ISA:EcoliWiki.
# GO_functionGO:0015553xanthosine transmembrane transporter activity; ISS:EcoliWiki.
# GO_processGO:0006810transport; ISA:EcoliWiki.
# GO_processGO:0015858nucleoside transport; ISA:EcoliWiki.
# GO_processGO:0055086nucleobase-containing small molecule metabolic process; IMP:EcoliWiki.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# GOslim_processGO:0044281small molecule metabolic process
# InterProIPR004740Nuc_H_symport
# InterProIPR020846MFS_dom
# KEGG_Briteko02000Transporters
# OrganismXAPB_ECOLIEscherichia coli (strain K12)
# PATRIC32120193VBIEscCol129921_2499
# PIRE65014E65014
# PROSITEPS50850MFS
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameXanthosine permease {ECO:0000303|PubMed11466294}
# RefSeqNP_416901NC_000913.3
# RefSeqWP_000020402NZ_LN832404.1
# SIMILARITYBelongs to the major facilitator superfamily. Nucleoside:H(+) symporter (NHS) (TC 2.A.1.10) family. {ECO0000305}.
# SUBCELLULAR LOCATIONXAPB_ECOLICell inner membrane {ECO 0000269|PubMed 11466294, ECO 0000269|PubMed 15919996, ECO 0000269|PubMed 7559336}; Multi-pass membrane protein {ECO 0000255}.
# SUPFAMSSF103473SSF103473
# TCDB2.A.1.10the major facilitator superfamily (mfs)
# TIGRFAMsTIGR008892A0110
# eggNOGENOG4105EAABacteria
# eggNOGENOG410ZVFULUCA
BLASTswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:XAPB_ECOLI
BioCycECOL316407:JW2397-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2397-MONOMER
BioCycEcoCyc:XAPB-MONOMERhttp://biocyc.org/getid?id=EcoCyc:XAPB-MONOMER
BioCycMetaCyc:XAPB-MONOMERhttp://biocyc.org/getid?id=MetaCyc:XAPB-MONOMER
COGCOG0477http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0477
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/4.2.91http://dx.doi.org/10.1093/dnares/4.2.91
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1128/JB.183.16.4900-4904.2001http://dx.doi.org/10.1128/JB.183.16.4900-4904.2001
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX73828http://www.ebi.ac.uk/ena/data/view/X73828
EchoBASEEB2951http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2951
EcoGeneEG13159http://www.ecogene.org/geneInfo.php?eg_id=EG13159
EnsemblBacteriaAAC75459http://www.ensemblgenomes.org/id/AAC75459
EnsemblBacteriaAAC75459http://www.ensemblgenomes.org/id/AAC75459
EnsemblBacteriaBAA16274http://www.ensemblgenomes.org/id/BAA16274
EnsemblBacteriaBAA16274http://www.ensemblgenomes.org/id/BAA16274
EnsemblBacteriaBAA16274http://www.ensemblgenomes.org/id/BAA16274
EnsemblBacteriab2406http://www.ensemblgenomes.org/id/b2406
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016020http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016020
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0005337http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005337
GO_functionGO:0015553http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015553
GO_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GO_processGO:0015858http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015858
GO_processGO:0055086http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055086
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
GeneID946868http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946868
HOGENOMHOG000026502http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000026502&db=HOGENOM6
InParanoidP45562http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P45562
InterProIPR004740http://www.ebi.ac.uk/interpro/entry/IPR004740
InterProIPR020846http://www.ebi.ac.uk/interpro/entry/IPR020846
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW2397http://www.genome.jp/dbget-bin/www_bget?ecj:JW2397
KEGG_Geneeco:b2406http://www.genome.jp/dbget-bin/www_bget?eco:b2406
KEGG_OrthologyKO:K11537http://www.genome.jp/dbget-bin/www_bget?KO:K11537
OMAWVMLINAhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=WVMLINA
PROSITEPS50850http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50850
PSORT-Bswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:XAPB_ECOLI
PSORT2swissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:XAPB_ECOLI
PSORTswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:XAPB_ECOLI
Phobiusswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:XAPB_ECOLI
PhylomeDBP45562http://phylomedb.org/?seqid=P45562
ProteinModelPortalP45562http://www.proteinmodelportal.org/query/uniprot/P45562
PubMed11466294http://www.ncbi.nlm.nih.gov/pubmed/11466294
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed7559336http://www.ncbi.nlm.nih.gov/pubmed/7559336
PubMed9205837http://www.ncbi.nlm.nih.gov/pubmed/9205837
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416901http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416901
RefSeqWP_000020402http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000020402
STRING511145.b2406http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b2406&targetmode=cogs
STRINGCOG0477http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0477&targetmode=cogs
SUPFAMSSF103473http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF103473
TCDB2.A.1.10http://www.tcdb.org/search/result.php?tc=2.A.1.10
TIGRFAMsTIGR00889http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00889
UniProtKB-ACP45562http://www.uniprot.org/uniprot/P45562
UniProtKBXAPB_ECOLIhttp://www.uniprot.org/uniprot/XAPB_ECOLI
chargeswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:XAPB_ECOLI
eggNOGENOG4105EAAhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105EAA
eggNOGENOG410ZVFUhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG410ZVFU
epestfindswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:XAPB_ECOLI
garnierswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:XAPB_ECOLI
helixturnhelixswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:XAPB_ECOLI
hmomentswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:XAPB_ECOLI
iepswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:XAPB_ECOLI
inforesidueswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:XAPB_ECOLI
octanolswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:XAPB_ECOLI
pepcoilswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:XAPB_ECOLI
pepdigestswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:XAPB_ECOLI
pepinfoswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:XAPB_ECOLI
pepnetswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:XAPB_ECOLI
pepstatsswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:XAPB_ECOLI
pepwheelswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:XAPB_ECOLI
pepwindowswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:XAPB_ECOLI
sigcleaveswissprot:XAPB_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:XAPB_ECOLI
DataBaseIDURL or Descriptions
# AltNameEIIC-Chb {ECO:0000303|PubMed2092358}
# AltNameIIcel {ECO:0000303|PubMed2179047}
# AltNameN,N'-diacetylchitobiose-specific phosphotransferase enzyme IIC component {ECO:0000303|PubMed2092358}
# BioGrid426031519
# CAUTIONWas originally (PubMed:2179047) characterized as part of a cryptic cel operon for a cellobiose degradation system. The Cel+ phenotype is due to mutations making expression chitobiose- independent and altering the substrate specificity. {ECO0000305|PubMed:2179047}.
# DOMAINPTQC_ECOLIThe EIIC type-3 domain forms the PTS system translocation channel and contains the specific substrate-binding site. {ECO 0000255|PROSITE-ProRule PRU00428}.
# EcoGeneEG10141chbC
# FUNCTIONPTQC_ECOLIThe phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II ChbABC PTS system is involved in the transport of the chitin disaccharide N,N'-diacetylchitobiose (GlcNAc2) (PubMed 10913117). Also able to use N,N',N''-triacetyl chitotriose (GlcNAc3) (PubMed 10913117). {ECO 0000269|PubMed 10913117, ECO 0000305|PubMed 2092358}.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0008982protein-N(PI)-phosphohistidine-sugar phosphotransferase activity; IEA:InterPro.
# GO_processGO:0009401phosphoenolpyruvate-dependent sugar phosphotransferase system; IEA:UniProtKB-KW.
# GO_processGO:1902815N,N'-diacetylchitobiose import; IDA:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# INDUCTIONBy GlcNAc2, GlcNAc3 and beta-N,N'-diacetylchitobiose (Me-TCB). {ECO:0000269|PubMed10913117}.
# InterProIPR003352PTS_EIIC
# InterProIPR004501PTS_EIIC_3
# InterProIPR004796PTS_IIC_cello
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00275 PTS system, cellobiose-specific II component
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02060Phosphotransferase system (PTS)
# OrganismPTQC_ECOLIEscherichia coli (strain K12)
# PATRIC32118783VBIEscCol129921_1809
# PIRA64933A64933
# PIRS10871S10871
# PIRSFPIRSF006351PTS_EIIC-Cellobiose
# PROSITEPS51105PTS_EIIC_TYPE_3
# PfamPF02378PTS_EIIC
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNamePTS system N,N'-diacetylchitobiose-specific EIIC component {ECO:0000303|PubMed2092358}
# RefSeqNP_416251NC_000913.3
# RefSeqWP_000073041NZ_LN832404.1
# SIMILARITYContains 1 PTS EIIC type-3 domain. {ECO:0000255|PROSITE-ProRulePRU00428}.
# SUBCELLULAR LOCATIONPTQC_ECOLICell inner membrane {ECO 0000255|PROSITE- ProRule PRU00428}; Multi-pass membrane protein {ECO 0000255|PROSITE-ProRule PRU00428}.
# TCDB4.A.3.2the pts lactose-n,n'-diacetylchitobiose-Beta-glucoside (lac) family
# TIGRFAMsTIGR00359cello_pts_IIC
# TIGRFAMsTIGR00410lacE
# eggNOGCOG1455LUCA
# eggNOGENOG4105CK1Bacteria
BLASTswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:PTQC_ECOLI
BioCycECOL316407:JW1726-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1726-MONOMER
BioCycEcoCyc:CELB-MONOMERhttp://biocyc.org/getid?id=EcoCyc:CELB-MONOMER
BioCycMetaCyc:CELB-MONOMERhttp://biocyc.org/getid?id=MetaCyc:CELB-MONOMER
COGCOG1455http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1455
DIPDIP-9264Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9264N
DOI10.1016/0923-2508(90)90079-6http://dx.doi.org/10.1016/0923-2508(90)90079-6
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.94.26.14367http://dx.doi.org/10.1073/pnas.94.26.14367
DOI10.1074/jbc.M001043200http://dx.doi.org/10.1074/jbc.M001043200
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX52890http://www.ebi.ac.uk/ena/data/view/X52890
EchoBASEEB0139http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0139
EcoGeneEG10141http://www.ecogene.org/geneInfo.php?eg_id=EG10141
EnsemblBacteriaAAC74807http://www.ensemblgenomes.org/id/AAC74807
EnsemblBacteriaAAC74807http://www.ensemblgenomes.org/id/AAC74807
EnsemblBacteriaBAA15518http://www.ensemblgenomes.org/id/BAA15518
EnsemblBacteriaBAA15518http://www.ensemblgenomes.org/id/BAA15518
EnsemblBacteriaBAA15518http://www.ensemblgenomes.org/id/BAA15518
EnsemblBacteriab1737http://www.ensemblgenomes.org/id/b1737
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0008982http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008982
GO_processGO:0009401http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009401
GO_processGO:1902815http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:1902815
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GeneID945982http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945982
HOGENOMHOG000224102http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000224102&db=HOGENOM6
InParanoidP17334http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P17334
IntActP17334http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P17334*
InterProIPR003352http://www.ebi.ac.uk/interpro/entry/IPR003352
InterProIPR004501http://www.ebi.ac.uk/interpro/entry/IPR004501
InterProIPR004796http://www.ebi.ac.uk/interpro/entry/IPR004796
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW1726http://www.genome.jp/dbget-bin/www_bget?ecj:JW1726
KEGG_Geneeco:b1737http://www.genome.jp/dbget-bin/www_bget?eco:b1737
KEGG_OrthologyKO:K02761http://www.genome.jp/dbget-bin/www_bget?KO:K02761
KEGG_Pathwayko02060http://www.genome.jp/kegg-bin/show_pathway?ko02060
OMAMAIKLPEhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=MAIKLPE
PROSITEPS51105http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51105
PSORT-Bswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:PTQC_ECOLI
PSORT2swissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:PTQC_ECOLI
PSORTswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:PTQC_ECOLI
PfamPF02378http://pfam.xfam.org/family/PF02378
Phobiusswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:PTQC_ECOLI
PhylomeDBP17334http://phylomedb.org/?seqid=P17334
ProteinModelPortalP17334http://www.proteinmodelportal.org/query/uniprot/P17334
PubMed10913117http://www.ncbi.nlm.nih.gov/pubmed/10913117
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2092358http://www.ncbi.nlm.nih.gov/pubmed/2092358
PubMed2179047http://www.ncbi.nlm.nih.gov/pubmed/2179047
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9405618http://www.ncbi.nlm.nih.gov/pubmed/9405618
RefSeqNP_416251http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416251
RefSeqWP_000073041http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000073041
STRING511145.b1737http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1737&targetmode=cogs
STRINGCOG1455http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1455&targetmode=cogs
TCDB4.A.3.2http://www.tcdb.org/search/result.php?tc=4.A.3.2
TIGRFAMsTIGR00359http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00359
TIGRFAMsTIGR00410http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00410
UniProtKB-ACP17334http://www.uniprot.org/uniprot/P17334
UniProtKBPTQC_ECOLIhttp://www.uniprot.org/uniprot/PTQC_ECOLI
chargeswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:PTQC_ECOLI
eggNOGCOG1455http://eggnogapi.embl.de/nog_data/html/tree/COG1455
eggNOGENOG4105CK1http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105CK1
epestfindswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:PTQC_ECOLI
garnierswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:PTQC_ECOLI
helixturnhelixswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:PTQC_ECOLI
hmomentswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:PTQC_ECOLI
iepswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:PTQC_ECOLI
inforesidueswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:PTQC_ECOLI
octanolswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:PTQC_ECOLI
pepcoilswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:PTQC_ECOLI
pepdigestswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:PTQC_ECOLI
pepinfoswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:PTQC_ECOLI
pepnetswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:PTQC_ECOLI
pepstatsswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:PTQC_ECOLI
pepwheelswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:PTQC_ECOLI
pepwindowswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:PTQC_ECOLI
sigcleaveswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:PTQC_ECOLI
DataBaseIDURL or Descriptions
# AltNamePTPC1_ECOLIEIIC-Aga
# AltNamePTPC1_ECOLIPTS system N-acetylgalactosamine-specific EIIC component 1
# BioGrid426242214
# DOMAINPTPC1_ECOLIThe EIIC domain forms the PTS system translocation channel and contains the specific substrate-binding site.
# EcoGeneEG12770agaC
# FUNCTIONPTPC1_ECOLIThe phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system is involved in N-acetylgalactosamine transport.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_processGO:0009401phosphoenolpyruvate-dependent sugar phosphotransferase system; IEA:UniProtKB-KW.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_processGO:0006810transport
# InterProIPR004700PTS_IIC_man
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00287 PTS system, galactosamine-specific II component
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko00052Galactose metabolism
# KEGG_Pathwayko02060Phosphotransferase system (PTS)
# OrganismPTPC1_ECOLIEscherichia coli (strain K12)
# PATRIC32121696VBIEscCol129921_3234
# PIRG65103G65103
# PROSITEPS51106PTS_EIIC_TYPE_4
# PfamPF03609EII-Sor
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNamePTPC1_ECOLIN-acetylgalactosamine permease IIC component 1
# RefSeqNP_417608NC_000913.3
# RefSeqWP_000544489NZ_LN832404.1
# SIMILARITYContains 1 PTS EIIC type-4 domain. {ECO:0000255|PROSITE-ProRulePRU00429}.
# SUBCELLULAR LOCATIONPTPC1_ECOLICell inner membrane; Multi-pass membrane protein.
# TIGRFAMsTIGR00822EII-Sor
# eggNOGCOG3715LUCA
# eggNOGENOG4105ETZBacteria
BLASTswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:PTPC1_ECOLI
BioCycECOL316407:JW3108-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3108-MONOMER
BioCycEcoCyc:AGAC-MONOMERhttp://biocyc.org/getid?id=EcoCyc:AGAC-MONOMER
COGCOG3715http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3715
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1099/13500872-142-2-231http://dx.doi.org/10.1099/13500872-142-2-231
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU18997http://www.ebi.ac.uk/ena/data/view/U18997
EchoBASEEB2623http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2623
EcoGeneEG12770http://www.ecogene.org/geneInfo.php?eg_id=EG12770
EnsemblBacteriaAAC76173http://www.ensemblgenomes.org/id/AAC76173
EnsemblBacteriaAAC76173http://www.ensemblgenomes.org/id/AAC76173
EnsemblBacteriaBAE77185http://www.ensemblgenomes.org/id/BAE77185
EnsemblBacteriaBAE77185http://www.ensemblgenomes.org/id/BAE77185
EnsemblBacteriaBAE77185http://www.ensemblgenomes.org/id/BAE77185
EnsemblBacteriab3139http://www.ensemblgenomes.org/id/b3139
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_processGO:0009401http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009401
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GeneID947652http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947652
HOGENOMHOG000097553http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000097553&db=HOGENOM6
InterProIPR004700http://www.ebi.ac.uk/interpro/entry/IPR004700
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW3108http://www.genome.jp/dbget-bin/www_bget?ecj:JW3108
KEGG_Geneeco:b3139http://www.genome.jp/dbget-bin/www_bget?eco:b3139
KEGG_OrthologyKO:K10985http://www.genome.jp/dbget-bin/www_bget?KO:K10985
KEGG_Pathwayko00052http://www.genome.jp/kegg-bin/show_pathway?ko00052
KEGG_Pathwayko02060http://www.genome.jp/kegg-bin/show_pathway?ko02060
KEGG_Reactionrn:R08367http://www.genome.jp/dbget-bin/www_bget?rn:R08367
OMAMEITSAQhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=MEITSAQ
PROSITEPS51106http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51106
PSORT-Bswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:PTPC1_ECOLI
PSORT2swissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:PTPC1_ECOLI
PSORTswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:PTPC1_ECOLI
PfamPF03609http://pfam.xfam.org/family/PF03609
Phobiusswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:PTPC1_ECOLI
PhylomeDBP42910http://phylomedb.org/?seqid=P42910
ProteinModelPortalP42910http://www.proteinmodelportal.org/query/uniprot/P42910
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8932697http://www.ncbi.nlm.nih.gov/pubmed/8932697
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_417608http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417608
RefSeqWP_000544489http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000544489
STRING511145.b3139http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3139&targetmode=cogs
STRINGCOG3715http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG3715&targetmode=cogs
TIGRFAMsTIGR00822http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00822
UniProtKB-ACP42910http://www.uniprot.org/uniprot/P42910
UniProtKBPTPC1_ECOLIhttp://www.uniprot.org/uniprot/PTPC1_ECOLI
chargeswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:PTPC1_ECOLI
eggNOGCOG3715http://eggnogapi.embl.de/nog_data/html/tree/COG3715
eggNOGENOG4105ETZhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105ETZ
epestfindswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:PTPC1_ECOLI
garnierswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:PTPC1_ECOLI
helixturnhelixswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:PTPC1_ECOLI
hmomentswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:PTPC1_ECOLI
iepswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:PTPC1_ECOLI
inforesidueswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:PTPC1_ECOLI
octanolswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:PTPC1_ECOLI
pepcoilswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:PTPC1_ECOLI
pepdigestswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:PTPC1_ECOLI
pepinfoswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:PTPC1_ECOLI
pepnetswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:PTPC1_ECOLI
pepstatsswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:PTPC1_ECOLI
pepwheelswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:PTPC1_ECOLI
pepwindowswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:PTPC1_ECOLI
sigcleaveswissprot:PTPC1_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:PTPC1_ECOLI
DataBaseIDURL or Descriptions
# AltNameLCFA_ECOLILong-chain acyl-CoA synthetase
# BIOPHYSICOCHEMICAL PROPERTIESpH dependence: Optimum pH is 7.5 - 7.8. {ECO0000269|PubMed:15213221};
# BioGrid4259150211
# CATALYTIC ACTIVITYATP + a long-chain fatty acid + CoA = AMP + diphosphate + an acyl-CoA. {ECO:0000269|PubMed15213221}.
# EcoGeneEG11530fadD
# FUNCTIONLCFA_ECOLICatalyzes the esterification, concomitant with transport, of exogenous long-chain fatty acids into metabolically active CoA thioesters for subsequent degradation or incorporation into phospholipids. Activity is the highest with fatty acid substrates of > 10 carbon atoms (PubMed 15213221). {ECO 0000269|PubMed 15213221}.
# GO_componentGO:0005737cytoplasm; IDA:EcoliWiki.
# GO_componentGO:0005829cytosol; TAS:EcoCyc.
# GO_componentGO:0009898cytoplasmic side of plasma membrane; TAS:EcoCyc.
# GO_functionGO:0004467long-chain fatty acid-CoA ligase activity; IDA:EcoCyc.
# GO_functionGO:0005504fatty acid binding; IMP:EcoliWiki.
# GO_functionGO:0005524ATP binding; IEA:UniProtKB-KW.
# GO_functionGO:0070538oleic acid binding; IMP:EcoliWiki.
# GO_functionGO:0102391decanoate--CoA ligase activity; IEA:UniProtKB-EC.
# GO_processGO:0006629lipid metabolic process; IMP:EcoliWiki.
# GO_processGO:0006631fatty acid metabolic process; IMP:EcoliWiki.
# GO_processGO:0006635fatty acid beta-oxidation; IDA:EcoCyc.
# GO_processGO:0006637acyl-CoA metabolic process; IDA:EcoCyc.
# GO_processGO:0008654phospholipid biosynthetic process; IMP:EcoliWiki.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005737cytoplasm
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0008289lipid binding
# GOslim_functionGO:0016874ligase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006629lipid metabolic process
# GOslim_processGO:0006790sulfur compound metabolic process
# GOslim_processGO:0009056catabolic process
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0044281small molecule metabolic process
# GOslim_processGO:0051186cofactor metabolic process
# INDUCTIONWell expressed during log and stationary phase aerobic growth but only poorly expressed during anaerobic growth (at protein level); aerobic expression is suppressed by glucose or C8 fatty acids (PubMed:15213221). {ECO0000269|PubMed:15213221}.
# IntActP694516
# InterProIPR000873AMP-dep_Synth/Lig
# InterProIPR020845AMP-binding_CS
# InterProIPR025110AMP-bd_C
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko01000 Enzymes
# KEGG_Briteko01004 Lipid biosynthesis proteins
# KEGG_Pathwayko00071Fatty acid metabolism
# KEGG_Pathwayko03320PPAR signaling pathway
# KEGG_Pathwayko04146Peroxisome
# KEGG_Pathwayko04920Adipocytokine signaling pathway
# OrganismLCFA_ECOLIEscherichia coli (strain K12)
# PATRIC32118927VBIEscCol129921_1881
# PIRE64941S41589
# PROSITEPS00455AMP_BINDING
# PTMLCFA_ECOLIPost-translationally cleaved by OmpT (PubMed 15213221). {ECO 0000269|PubMed 15213221}.
# PfamPF00501AMP-binding
# PfamPF13193AMP-binding_C
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameLCFA_ECOLILong-chain-fatty-acid--CoA ligase
# RefSeqNP_416319NC_000913.3
# SIMILARITYBelongs to the ATP-dependent AMP-binding enzyme family. {ECO0000305}.
# SUBCELLULAR LOCATIONLCFA_ECOLIMembrane {ECO 0000250}; Peripheral membrane protein {ECO 0000250}. Note=Partially membrane-associated. {ECO 0000250}.
# SUBUNITHomodimer. {ECO0000305}.
# TCDB4.C.1.1the proposed fatty acid transporter (fat) family
# eggNOGCOG0318LUCA
# eggNOGENOG4105CEYBacteria
BLASTswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:LCFA_ECOLI
BioCycECOL316407:JW1794-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1794-MONOMER
BioCycEcoCyc:ACYLCOASYN-MONOMERhttp://biocyc.org/getid?id=EcoCyc:ACYLCOASYN-MONOMER
BioCycMetaCyc:ACYLCOASYN-MONOMERhttp://biocyc.org/getid?id=MetaCyc:ACYLCOASYN-MONOMER
COGCOG0318http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0318
COGCOG1022http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1022
DOI10.1007/BF00280412http://dx.doi.org/10.1007/BF00280412
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1074/jbc.M107022200http://dx.doi.org/10.1074/jbc.M107022200
DOI10.1074/jbc.M405233200http://dx.doi.org/10.1074/jbc.M405233200
DOI10.1093/dnares/3.6.379http://dx.doi.org/10.1093/dnares/3.6.379
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:6.2.1.3 {ECO:0000269|PubMed:15213221}http://www.genome.jp/dbget-bin/www_bget?EC:6.2.1.3 {ECO:0000269|PubMed:15213221}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLL02649http://www.ebi.ac.uk/ena/data/view/L02649
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX70994http://www.ebi.ac.uk/ena/data/view/X70994
ENZYME6.2.1.3 {ECO:0000269|PubMed:15213221}http://enzyme.expasy.org/EC/6.2.1.3 {ECO:0000269|PubMed:15213221}
EchoBASEEB1492http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1492
EcoGeneEG11530http://www.ecogene.org/geneInfo.php?eg_id=EG11530
EnsemblBacteriaAAC74875http://www.ensemblgenomes.org/id/AAC74875
EnsemblBacteriaAAC74875http://www.ensemblgenomes.org/id/AAC74875
EnsemblBacteriaBAA15609http://www.ensemblgenomes.org/id/BAA15609
EnsemblBacteriaBAA15609http://www.ensemblgenomes.org/id/BAA15609
EnsemblBacteriaBAA15609http://www.ensemblgenomes.org/id/BAA15609
EnsemblBacteriab1805http://www.ensemblgenomes.org/id/b1805
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_componentGO:0009898http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009898
GO_functionGO:0004467http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004467
GO_functionGO:0005504http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005504
GO_functionGO:0005524http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005524
GO_functionGO:0070538http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0070538
GO_functionGO:0102391http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0102391
GO_processGO:0006629http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006629
GO_processGO:0006631http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006631
GO_processGO:0006635http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006635
GO_processGO:0006637http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006637
GO_processGO:0008654http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008654
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0008289http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008289
GOslim_functionGO:0016874http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016874
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006629http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006629
GOslim_processGO:0006790http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006790
GOslim_processGO:0009056http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009056
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
GOslim_processGO:0051186http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0051186
GeneID946327http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946327
HOGENOMHOG000229983http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000229983&db=HOGENOM6
InParanoidP69451http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P69451
IntActP69451http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P69451*
IntEnz6.2.1.3 {ECO:0000269|PubMed:15213221}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=6.2.1.3 {ECO:0000269|PubMed:15213221}
InterProIPR000873http://www.ebi.ac.uk/interpro/entry/IPR000873
InterProIPR020845http://www.ebi.ac.uk/interpro/entry/IPR020845
InterProIPR025110http://www.ebi.ac.uk/interpro/entry/IPR025110
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Briteko01004http://www.genome.jp/dbget-bin/www_bget?ko01004
KEGG_Geneecj:JW1794http://www.genome.jp/dbget-bin/www_bget?ecj:JW1794
KEGG_Geneeco:b1805http://www.genome.jp/dbget-bin/www_bget?eco:b1805
KEGG_OrthologyKO:K01897http://www.genome.jp/dbget-bin/www_bget?KO:K01897
KEGG_Pathwayko00071http://www.genome.jp/kegg-bin/show_pathway?ko00071
KEGG_Pathwayko03320http://www.genome.jp/kegg-bin/show_pathway?ko03320
KEGG_Pathwayko04146http://www.genome.jp/kegg-bin/show_pathway?ko04146
KEGG_Pathwayko04920http://www.genome.jp/kegg-bin/show_pathway?ko04920
KEGG_Reactionrn:R01280http://www.genome.jp/dbget-bin/www_bget?rn:R01280
OMAITFSDFHhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=ITFSDFH
PROSITEPS00455http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00455
PSORT-Bswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:LCFA_ECOLI
PSORT2swissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:LCFA_ECOLI
PSORTswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:LCFA_ECOLI
PfamPF00501http://pfam.xfam.org/family/PF00501
PfamPF13193http://pfam.xfam.org/family/PF13193
Phobiusswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:LCFA_ECOLI
PhylomeDBP69451http://phylomedb.org/?seqid=P69451
ProteinModelPortalP69451http://www.proteinmodelportal.org/query/uniprot/P69451
PubMed12034706http://www.ncbi.nlm.nih.gov/pubmed/12034706
PubMed1460045http://www.ncbi.nlm.nih.gov/pubmed/1460045
PubMed15213221http://www.ncbi.nlm.nih.gov/pubmed/15213221
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8107670http://www.ncbi.nlm.nih.gov/pubmed/8107670
PubMed9097040http://www.ncbi.nlm.nih.gov/pubmed/9097040
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416319http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416319
SMRP69451http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P69451
STRING511145.b1805http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1805&targetmode=cogs
STRINGCOG0318http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0318&targetmode=cogs
STRINGCOG1022http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1022&targetmode=cogs
TCDB4.C.1.1http://www.tcdb.org/search/result.php?tc=4.C.1.1
UniProtKB-ACP69451http://www.uniprot.org/uniprot/P69451
UniProtKBLCFA_ECOLIhttp://www.uniprot.org/uniprot/LCFA_ECOLI
chargeswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:LCFA_ECOLI
eggNOGCOG0318http://eggnogapi.embl.de/nog_data/html/tree/COG0318
eggNOGENOG4105CEYhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105CEY
epestfindswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:LCFA_ECOLI
garnierswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:LCFA_ECOLI
helixturnhelixswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:LCFA_ECOLI
hmomentswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:LCFA_ECOLI
iepswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:LCFA_ECOLI
inforesidueswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:LCFA_ECOLI
octanolswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:LCFA_ECOLI
pepcoilswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:LCFA_ECOLI
pepdigestswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:LCFA_ECOLI
pepinfoswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:LCFA_ECOLI
pepnetswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:LCFA_ECOLI
pepstatsswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:LCFA_ECOLI
pepwheelswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:LCFA_ECOLI
pepwindowswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:LCFA_ECOLI
sigcleaveswissprot:LCFA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:LCFA_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426037819
# EcoGeneEG14035flhB
# FUNCTIONFLHB_ECOLIRequired for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_processGO:0009306protein secretion; IEA:InterPro.
# GO_processGO:0044780bacterial-type flagellum assembly; IEA:InterPro.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_processGO:0006810transport
# GOslim_processGO:0022607cellular component assembly
# Gene3D3.40.1690.10-; 1.
# IntActP762993
# InterProIPR006135T3SS_substrate_exporter
# InterProIPR006136FlhB
# InterProIPR029025T3SS_substrate_exporter_C
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko02035 Bacterial motility proteins
# KEGG_Briteko02044 Secretion system
# KEGG_Pathwayko02040Flagellar assembly
# OrganismFLHB_ECOLIEscherichia coli (strain K12)
# PANTHERPTHR30531PTHR30531
# PATRIC32119085VBIEscCol129921_1960
# PIRH64950H64950
# PRINTSPR00950TYPE3IMSPROT
# PfamPF01312Bac_export_2
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameFLHB_ECOLIFlagellar biosynthetic protein FlhB
# RefSeqNP_416394NC_000913.3
# RefSeqWP_001278954NZ_LN832404.1
# SIMILARITYBelongs to the type III secretion exporter family. {ECO0000305}.
# SUBCELLULAR LOCATIONFLHB_ECOLICell inner membrane; Multi-pass membrane protein.
# SUPFAMSSF160544SSF160544
# TIGRFAMsTIGR00328flhB
# eggNOGCOG1377LUCA
# eggNOGENOG4105D00Bacteria
BLASTswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:FLHB_ECOLI
BioCycECOL316407:JW1869-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1869-MONOMER
BioCycEcoCyc:G7028-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G7028-MONOMER
COGCOG1377http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1377
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.379http://dx.doi.org/10.1093/dnares/3.6.379
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU88319http://www.ebi.ac.uk/ena/data/view/U88319
EchoBASEEB3789http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3789
EcoGeneEG14035http://www.ecogene.org/geneInfo.php?eg_id=EG14035
EnsemblBacteriaAAC74950http://www.ensemblgenomes.org/id/AAC74950
EnsemblBacteriaAAC74950http://www.ensemblgenomes.org/id/AAC74950
EnsemblBacteriaBAA15696http://www.ensemblgenomes.org/id/BAA15696
EnsemblBacteriaBAA15696http://www.ensemblgenomes.org/id/BAA15696
EnsemblBacteriaBAA15696http://www.ensemblgenomes.org/id/BAA15696
EnsemblBacteriab1880http://www.ensemblgenomes.org/id/b1880
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_processGO:0009306http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009306
GO_processGO:0044780http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044780
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0022607http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022607
Gene3D3.40.1690.10http://www.cathdb.info/version/latest/superfamily/3.40.1690.10
GeneID946391http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946391
HOGENOMHOG000253899http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000253899&db=HOGENOM6
InParanoidP76299http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P76299
IntActP76299http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P76299*
InterProIPR006135http://www.ebi.ac.uk/interpro/entry/IPR006135
InterProIPR006136http://www.ebi.ac.uk/interpro/entry/IPR006136
InterProIPR029025http://www.ebi.ac.uk/interpro/entry/IPR029025
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko02035http://www.genome.jp/dbget-bin/www_bget?ko02035
KEGG_Briteko02044http://www.genome.jp/dbget-bin/www_bget?ko02044
KEGG_Geneecj:JW1869http://www.genome.jp/dbget-bin/www_bget?ecj:JW1869
KEGG_Geneeco:b1880http://www.genome.jp/dbget-bin/www_bget?eco:b1880
KEGG_OrthologyKO:K02401http://www.genome.jp/dbget-bin/www_bget?KO:K02401
KEGG_Pathwayko02040http://www.genome.jp/kegg-bin/show_pathway?ko02040
OMANLKMSKQhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=NLKMSKQ
PANTHERPTHR30531http://www.pantherdb.org/panther/family.do?clsAccession=PTHR30531
PRINTSPR00950http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00950
PSORT-Bswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:FLHB_ECOLI
PSORT2swissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:FLHB_ECOLI
PSORTswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:FLHB_ECOLI
PfamPF01312http://pfam.xfam.org/family/PF01312
Phobiusswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:FLHB_ECOLI
PhylomeDBP76299http://phylomedb.org/?seqid=P76299
ProteinModelPortalP76299http://www.proteinmodelportal.org/query/uniprot/P76299
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9097040http://www.ncbi.nlm.nih.gov/pubmed/9097040
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416394http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416394
RefSeqWP_001278954http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001278954
SMRP76299http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P76299
STRING511145.b1880http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1880&targetmode=cogs
STRINGCOG1377http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1377&targetmode=cogs
SUPFAMSSF160544http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF160544
TIGRFAMsTIGR00328http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00328
UniProtKB-ACP76299http://www.uniprot.org/uniprot/P76299
UniProtKBFLHB_ECOLIhttp://www.uniprot.org/uniprot/FLHB_ECOLI
chargeswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:FLHB_ECOLI
eggNOGCOG1377http://eggnogapi.embl.de/nog_data/html/tree/COG1377
eggNOGENOG4105D00http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105D00
epestfindswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:FLHB_ECOLI
garnierswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:FLHB_ECOLI
helixturnhelixswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:FLHB_ECOLI
hmomentswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:FLHB_ECOLI
iepswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:FLHB_ECOLI
inforesidueswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:FLHB_ECOLI
octanolswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:FLHB_ECOLI
pepcoilswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:FLHB_ECOLI
pepdigestswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:FLHB_ECOLI
pepinfoswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:FLHB_ECOLI
pepnetswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:FLHB_ECOLI
pepstatsswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:FLHB_ECOLI
pepwheelswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:FLHB_ECOLI
pepwindowswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:FLHB_ECOLI
sigcleaveswissprot:FLHB_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:FLHB_ECOLI