DataBaseIDURL or Descriptions
# BioGrid42607029
# EcoGeneEG11129rem
# IntActP070102
# InterProIPR016418UCP004509_Rem
# OrganismREM_ECOLIEscherichia coli (strain K12)
# PATRIC32118426VBIEscCol129921_1633
# PIRD22830QQECR9
# PIRSFPIRSF004509UCP004509_Rem
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameREM_ECOLIUncharacterized protein Rem
# RefSeqNP_416079NC_000913.3
# RefSeqWP_000980994NZ_LN832404.1
BLASTswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:REM_ECOLI
BioCycECOL316407:JW1553-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1553-MONOMER
BioCycEcoCyc:EG11129-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11129-MONOMER
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX02405http://www.ebi.ac.uk/ena/data/view/X02405
EchoBASEEB1119http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1119
EcoGeneEG11129http://www.ecogene.org/geneInfo.php?eg_id=EG11129
EnsemblBacteriaAAC74634http://www.ensemblgenomes.org/id/AAC74634
EnsemblBacteriaAAC74634http://www.ensemblgenomes.org/id/AAC74634
EnsemblBacteriaBAA15260http://www.ensemblgenomes.org/id/BAA15260
EnsemblBacteriaBAA15260http://www.ensemblgenomes.org/id/BAA15260
EnsemblBacteriaBAA15260http://www.ensemblgenomes.org/id/BAA15260
EnsemblBacteriab1561http://www.ensemblgenomes.org/id/b1561
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GeneID946109http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946109
HOGENOMHOG000009452http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000009452&db=HOGENOM6
IntActP07010http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P07010*
InterProIPR016418http://www.ebi.ac.uk/interpro/entry/IPR016418
KEGG_Geneecj:JW1553http://www.genome.jp/dbget-bin/www_bget?ecj:JW1553
KEGG_Geneeco:b1561http://www.genome.jp/dbget-bin/www_bget?eco:b1561
OMAVSHYRILhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=VSHYRIL
PSORT-Bswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:REM_ECOLI
PSORT2swissprot:REM_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:REM_ECOLI
PSORTswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:REM_ECOLI
Phobiusswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:REM_ECOLI
ProteinModelPortalP07010http://www.proteinmodelportal.org/query/uniprot/P07010
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2990907http://www.ncbi.nlm.nih.gov/pubmed/2990907
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416079http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416079
RefSeqWP_000980994http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000980994
STRING511145.b1561http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1561&targetmode=cogs
UniProtKB-ACP07010http://www.uniprot.org/uniprot/P07010
UniProtKBREM_ECOLIhttp://www.uniprot.org/uniprot/REM_ECOLI
chargeswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:REM_ECOLI
epestfindswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:REM_ECOLI
garnierswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:REM_ECOLI
helixturnhelixswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:REM_ECOLI
hmomentswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:REM_ECOLI
iepswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:REM_ECOLI
inforesidueswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:REM_ECOLI
octanolswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:REM_ECOLI
pepcoilswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:REM_ECOLI
pepdigestswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:REM_ECOLI
pepinfoswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:REM_ECOLI
pepnetswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:REM_ECOLI
pepstatsswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:REM_ECOLI
pepwheelswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:REM_ECOLI
pepwindowswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:REM_ECOLI
sigcleaveswissprot:REM_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:REM_ECOLI
DataBaseIDURL or Descriptions
# BioGrid4260155258
# EcoGeneEG13376mppA
# FUNCTIONMPPA_ECOLIEssential for the uptake of the murein peptide L-alanyl- gamma-D-glutamyl-meso-diaminopimelate. Also transports some alpha- linked peptides such as Pro-Phe-Lys with low affinity. The transport is effected by the oligopeptide permease system.
# GO_componentGO:0030288outer membrane-bounded periplasmic space; IDA:EcoCyc.
# GO_componentGO:0042597periplasmic space; IDA:EcoliWiki.
# GO_componentGO:0043190ATP-binding cassette (ABC) transporter complex; IEA:InterPro.
# GO_functionGO:0015197peptide transporter activity; IBA:GO_Central.
# GO_processGO:0015031protein transport; IEA:UniProtKB-KW.
# GO_processGO:0042939tripeptide transport; IMP:EcoliWiki.
# GO_processGO:0055085transmembrane transport; IEA:InterPro.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0043234protein complex
# GOslim_functionGO:0003674molecular_function
# GOslim_processGO:0006810transport
# GOslim_processGO:0055085transmembrane transport
# InterProIPR000914SBP_5_dom
# InterProIPR023765SBP_5_CS
# InterProIPR030678Peptide/Ni-bd
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00439 Oligopeptide transport system
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02010ABC transporters
# OrganismMPPA_ECOLIEscherichia coli (strain K12)
# PATRIC32117934VBIEscCol129921_1387
# PDB3O9PX-ray; 2.07 A; A=23-537
# PDB4TOZX-ray; 1.50 A; A/B=23-537
# PIRD64882D64882
# PIRSFPIRSF002741MppA
# PROSITEPS01040SBP_BACTERIAL_5
# PfamPF00496SBP_bac_5
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameMPPA_ECOLIPeriplasmic murein peptide-binding protein
# RefSeqNP_415845NC_000913.3
# RefSeqWP_000683020NZ_LN832404.1
# SIMILARITYBelongs to the bacterial solute-binding protein 5 family. {ECO0000305}.
# SUBCELLULAR LOCATIONMPPA_ECOLIPeriplasm.
# TCDB3.A.1.5.41the atp-binding cassette (abc) superfamily
# TCDB3.A.1.5the atp-binding cassette (abc) superfamily
# eggNOGCOG4166LUCA
# eggNOGENOG4107QSIBacteria
BLASTswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:MPPA_ECOLI
BioCycECOL316407:JW1322-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1322-MONOMER
BioCycEcoCyc:G6665-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6665-MONOMER
BioCycMetaCyc:G6665-MONOMERhttp://biocyc.org/getid?id=MetaCyc:G6665-MONOMER
COGCOG4166http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4166
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU88242http://www.ebi.ac.uk/ena/data/view/U88242
EchoBASEEB3158http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3158
EcoGeneEG13376http://www.ecogene.org/geneInfo.php?eg_id=EG13376
EnsemblBacteriaAAC74411http://www.ensemblgenomes.org/id/AAC74411
EnsemblBacteriaAAC74411http://www.ensemblgenomes.org/id/AAC74411
EnsemblBacteriaBAA14922http://www.ensemblgenomes.org/id/BAA14922
EnsemblBacteriaBAA14922http://www.ensemblgenomes.org/id/BAA14922
EnsemblBacteriaBAA14922http://www.ensemblgenomes.org/id/BAA14922
EnsemblBacteriab1329http://www.ensemblgenomes.org/id/b1329
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0030288http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030288
GO_componentGO:0042597http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042597
GO_componentGO:0043190http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043190
GO_functionGO:0015197http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015197
GO_processGO:0015031http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015031
GO_processGO:0042939http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042939
GO_processGO:0055085http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055085
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0043234http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043234
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0055085http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055085
GeneID945951http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945951
HOGENOMHOG000179191http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000179191&db=HOGENOM6
InParanoidP77348http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P77348
InterProIPR000914http://www.ebi.ac.uk/interpro/entry/IPR000914
InterProIPR023765http://www.ebi.ac.uk/interpro/entry/IPR023765
InterProIPR030678http://www.ebi.ac.uk/interpro/entry/IPR030678
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW1322http://www.genome.jp/dbget-bin/www_bget?ecj:JW1322
KEGG_Geneeco:b1329http://www.genome.jp/dbget-bin/www_bget?eco:b1329
KEGG_OrthologyKO:K15580http://www.genome.jp/dbget-bin/www_bget?KO:K15580
KEGG_Pathwayko02010http://www.genome.jp/kegg-bin/show_pathway?ko02010
OMAIDRRVMAhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=IDRRVMA
PDB3O9Phttp://www.ebi.ac.uk/pdbe-srv/view/entry/3O9P
PDB4TOZhttp://www.ebi.ac.uk/pdbe-srv/view/entry/4TOZ
PDBsum3O9Phttp://www.ebi.ac.uk/pdbsum/3O9P
PDBsum4TOZhttp://www.ebi.ac.uk/pdbsum/4TOZ
PROSITEPS01040http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS01040
PSORT-Bswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:MPPA_ECOLI
PSORT2swissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:MPPA_ECOLI
PSORTswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:MPPA_ECOLI
PfamPF00496http://pfam.xfam.org/family/PF00496
Phobiusswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:MPPA_ECOLI
PhylomeDBP77348http://phylomedb.org/?seqid=P77348
ProteinModelPortalP77348http://www.proteinmodelportal.org/query/uniprot/P77348
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9495761http://www.ncbi.nlm.nih.gov/pubmed/9495761
RefSeqNP_415845http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415845
RefSeqWP_000683020http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000683020
SMRP77348http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P77348
STRING511145.b1329http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1329&targetmode=cogs
STRINGCOG4166http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG4166&targetmode=cogs
SWISS-2DPAGEP77348http://world-2dpage.expasy.org/swiss-2dpage/protein/ac=P77348
TCDB3.A.1.5.41http://www.tcdb.org/search/result.php?tc=3.A.1.5.41
TCDB3.A.1.5http://www.tcdb.org/search/result.php?tc=3.A.1.5
UniProtKB-ACP77348http://www.uniprot.org/uniprot/P77348
UniProtKBMPPA_ECOLIhttp://www.uniprot.org/uniprot/MPPA_ECOLI
chargeswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:MPPA_ECOLI
eggNOGCOG4166http://eggnogapi.embl.de/nog_data/html/tree/COG4166
eggNOGENOG4107QSIhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4107QSI
epestfindswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:MPPA_ECOLI
garnierswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:MPPA_ECOLI
helixturnhelixswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:MPPA_ECOLI
hmomentswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:MPPA_ECOLI
iepswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:MPPA_ECOLI
inforesidueswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:MPPA_ECOLI
octanolswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:MPPA_ECOLI
pepcoilswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:MPPA_ECOLI
pepdigestswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:MPPA_ECOLI
pepinfoswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:MPPA_ECOLI
pepnetswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:MPPA_ECOLI
pepstatsswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:MPPA_ECOLI
pepwheelswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:MPPA_ECOLI
pepwindowswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:MPPA_ECOLI
sigcleaveswissprot:MPPA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:MPPA_ECOLI
DataBaseIDURL or Descriptions
# BioGrid42608016
# CAUTIONPubMed:7841459 sequence was originally thought to originate from S.typhimurium, but seems to come from an unknown E.coli strain. {ECO0000305}.
# EcoGeneEG11029trpR
# FUNCTIONTRPR_ECOLIThis protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region.
# GO_componentGO:0005737cytoplasm; IEA:UniProtKB-SubCell.
# GO_functionGO:0003677DNA binding; IDA:EcoCyc.
# GO_functionGO:0003700transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
# GO_functionGO:0043565sequence-specific DNA binding; IDA:EcoCyc.
# GO_processGO:0006351transcription, DNA-templated; IEA:UniProtKB-KW.
# GO_processGO:0006355regulation of transcription, DNA-templated; IDA:EcoCyc.
# GO_processGO:0045892negative regulation of transcription, DNA-templated; IEA:UniProtKB-HAMAP.
# GOslim_componentGO:0005737cytoplasm
# GOslim_functionGO:0001071nucleic acid binding transcription factor activity
# GOslim_functionGO:0003677DNA binding
# GOslim_processGO:0008150biological_process
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# Gene3D1.10.1270.10-; 1.
# HAMAPMF_00475Trp_repressor
# IntActP0A8813
# InterProIPR000831Trp_repress
# InterProIPR010921Trp_repressor/repl_initiator
# InterProIPR013335Trp_repress_bac
# KEGG_Briteko03000Transcription factors
# OrganismTRPR_ECOLIEscherichia coli (strain K12)
# PATRIC32124404VBIEscCol129921_4542
# PDB1CO0NMR; -; A/B=2-108
# PDB1JHGX-ray; 1.30 A; A=8-108
# PDB1MI7X-ray; 2.50 A; R=2-108
# PDB1RCSNMR; -; A/B=4-107
# PDB1TROX-ray; 1.90 A; A/C/E/G=1-108
# PDB1TRRX-ray; 2.40 A; A/B/D/E/G/H/J/K=2-108
# PDB1WRPX-ray; 2.20 A; R=2-108
# PDB1WRSNMR; -; R/S=4-108
# PDB1WRTNMR; -; R/S=4-108
# PDB1ZT9X-ray; 2.00 A; A/B/D/E=2-108
# PDB2OZ9X-ray; 1.65 A; R=2-108
# PDB3SSWX-ray; 1.67 A; N/R=2-108
# PDB3SSXX-ray; 1.58 A; N/R=2-108
# PDB3WRPX-ray; 1.80 A; A=1-108
# PIRA03568RPECW
# PIRSFPIRSF003196Trp_repressor
# PfamPF01371Trp_repressor
# ProDomPD012582Trp_repress_bac
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameTRPR_ECOLITrp operon repressor
# RefSeqNP_418810NC_000913.3
# RefSeqWP_000068679NZ_LN832404.1
# SIMILARITYBelongs to the TrpR family. {ECO0000305}.
# SUBCELLULAR LOCATIONTRPR_ECOLICytoplasm.
# SUBUNITTRPR_ECOLIHomodimer.
# SUPFAMSSF48295SSF48295
# TIGRFAMsTIGR01321TrpR
# eggNOGCOG2973LUCA
# eggNOGENOG4105R9MBacteria
BLASTswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:TRPR_ECOLI
BioCycECOL316407:JW4356-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW4356-MONOMER
BioCycEcoCyc:PD00423http://biocyc.org/getid?id=EcoCyc:PD00423
COGCOG2973http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2973
DIPDIP-48204Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-48204N
DOI10.1002/elps.1150180805http://dx.doi.org/10.1002/elps.1150180805
DOI10.1006/jmbi.1993.1076http://dx.doi.org/10.1006/jmbi.1993.1076
DOI10.1006/jmbi.1994.1317http://dx.doi.org/10.1006/jmbi.1994.1317
DOI10.1016/0167-4781(90)90047-6http://dx.doi.org/10.1016/0167-4781(90)90047-6
DOI10.1021/bi00479a002http://dx.doi.org/10.1021/bi00479a002
DOI10.1038/327591a0http://dx.doi.org/10.1038/327591a0
DOI10.1038/333869a0http://dx.doi.org/10.1038/333869a0
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.77.12.7117http://dx.doi.org/10.1073/pnas.77.12.7117
DOI10.1093/nar/23.12.2105http://dx.doi.org/10.1093/nar/23.12.2105
DOI10.1093/nar/8.7.1551http://dx.doi.org/10.1093/nar/8.7.1551
DOI10.1111/j.1432-1033.1991.tb16344.xhttp://dx.doi.org/10.1111/j.1432-1033.1991.tb16344.x
DOI10.1111/j.1432-1033.1992.tb16616.xhttp://dx.doi.org/10.1111/j.1432-1033.1992.tb16616.x
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLJ01715http://www.ebi.ac.uk/ena/data/view/J01715
EMBLL13768http://www.ebi.ac.uk/ena/data/view/L13768
EMBLM69185http://www.ebi.ac.uk/ena/data/view/M69185
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU14003http://www.ebi.ac.uk/ena/data/view/U14003
EchoBASEEB1022http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1022
EcoGeneEG11029http://www.ecogene.org/geneInfo.php?eg_id=EG11029
EnsemblBacteriaAAC77346http://www.ensemblgenomes.org/id/AAC77346
EnsemblBacteriaAAC77346http://www.ensemblgenomes.org/id/AAC77346
EnsemblBacteriaBAE78382http://www.ensemblgenomes.org/id/BAE78382
EnsemblBacteriaBAE78382http://www.ensemblgenomes.org/id/BAE78382
EnsemblBacteriaBAE78382http://www.ensemblgenomes.org/id/BAE78382
EnsemblBacteriab4393http://www.ensemblgenomes.org/id/b4393
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GO_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GO_functionGO:0003700http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003700
GO_functionGO:0043565http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043565
GO_processGO:0006351http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006351
GO_processGO:0006355http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006355
GO_processGO:0045892http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0045892
GOslim_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GOslim_functionGO:0001071http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0001071
GOslim_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
Gene3D1.10.1270.10http://www.cathdb.info/version/latest/superfamily/1.10.1270.10
GeneID948917http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=948917
HAMAPMF_00475http://hamap.expasy.org/unirule/MF_00475
HOGENOMHOG000288846http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000288846&db=HOGENOM6
InParanoidP0A881http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0A881
IntActP0A881http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0A881*
InterProIPR000831http://www.ebi.ac.uk/interpro/entry/IPR000831
InterProIPR010921http://www.ebi.ac.uk/interpro/entry/IPR010921
InterProIPR013335http://www.ebi.ac.uk/interpro/entry/IPR013335
KEGG_Briteko03000http://www.genome.jp/dbget-bin/www_bget?ko03000
KEGG_Geneecj:JW4356http://www.genome.jp/dbget-bin/www_bget?ecj:JW4356
KEGG_Geneeco:b4393http://www.genome.jp/dbget-bin/www_bget?eco:b4393
KEGG_OrthologyKO:K03720http://www.genome.jp/dbget-bin/www_bget?KO:K03720
OMAGQMSQREhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=GQMSQRE
PDB1CO0http://www.ebi.ac.uk/pdbe-srv/view/entry/1CO0
PDB1JHGhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1JHG
PDB1MI7http://www.ebi.ac.uk/pdbe-srv/view/entry/1MI7
PDB1RCShttp://www.ebi.ac.uk/pdbe-srv/view/entry/1RCS
PDB1TROhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1TRO
PDB1TRRhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1TRR
PDB1WRPhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1WRP
PDB1WRShttp://www.ebi.ac.uk/pdbe-srv/view/entry/1WRS
PDB1WRThttp://www.ebi.ac.uk/pdbe-srv/view/entry/1WRT
PDB1ZT9http://www.ebi.ac.uk/pdbe-srv/view/entry/1ZT9
PDB2OZ9http://www.ebi.ac.uk/pdbe-srv/view/entry/2OZ9
PDB3SSWhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3SSW
PDB3SSXhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3SSX
PDB3WRPhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3WRP
PDBsum1CO0http://www.ebi.ac.uk/pdbsum/1CO0
PDBsum1JHGhttp://www.ebi.ac.uk/pdbsum/1JHG
PDBsum1MI7http://www.ebi.ac.uk/pdbsum/1MI7
PDBsum1RCShttp://www.ebi.ac.uk/pdbsum/1RCS
PDBsum1TROhttp://www.ebi.ac.uk/pdbsum/1TRO
PDBsum1TRRhttp://www.ebi.ac.uk/pdbsum/1TRR
PDBsum1WRPhttp://www.ebi.ac.uk/pdbsum/1WRP
PDBsum1WRShttp://www.ebi.ac.uk/pdbsum/1WRS
PDBsum1WRThttp://www.ebi.ac.uk/pdbsum/1WRT
PDBsum1ZT9http://www.ebi.ac.uk/pdbsum/1ZT9
PDBsum2OZ9http://www.ebi.ac.uk/pdbsum/2OZ9
PDBsum3SSWhttp://www.ebi.ac.uk/pdbsum/3SSW
PDBsum3SSXhttp://www.ebi.ac.uk/pdbsum/3SSX
PDBsum3WRPhttp://www.ebi.ac.uk/pdbsum/3WRP
PSORT-Bswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:TRPR_ECOLI
PSORT2swissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:TRPR_ECOLI
PSORTswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:TRPR_ECOLI
PfamPF01371http://pfam.xfam.org/family/PF01371
Phobiusswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:TRPR_ECOLI
ProteinModelPortalP0A881http://www.proteinmodelportal.org/query/uniprot/P0A881
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed1740124http://www.ncbi.nlm.nih.gov/pubmed/1740124
PubMed1935980http://www.ncbi.nlm.nih.gov/pubmed/1935980
PubMed1938883http://www.ncbi.nlm.nih.gov/pubmed/1938883
PubMed2182120http://www.ncbi.nlm.nih.gov/pubmed/2182120
PubMed2207078http://www.ncbi.nlm.nih.gov/pubmed/2207078
PubMed3290685http://www.ncbi.nlm.nih.gov/pubmed/3290685
PubMed3600756http://www.ncbi.nlm.nih.gov/pubmed/3600756
PubMed7001368http://www.ncbi.nlm.nih.gov/pubmed/7001368
PubMed7012834http://www.ncbi.nlm.nih.gov/pubmed/7012834
PubMed7610040http://www.ncbi.nlm.nih.gov/pubmed/7610040
PubMed7841459http://www.ncbi.nlm.nih.gov/pubmed/7841459
PubMed8176748http://www.ncbi.nlm.nih.gov/pubmed/8176748
PubMed8433368http://www.ncbi.nlm.nih.gov/pubmed/8433368
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9298644http://www.ncbi.nlm.nih.gov/pubmed/9298644
RefSeqNP_418810http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_418810
RefSeqWP_000068679http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000068679
SMRP0A881http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0A881
STRING511145.b4393http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b4393&targetmode=cogs
STRINGCOG2973http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG2973&targetmode=cogs
SUPFAMSSF48295http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF48295
TIGRFAMsTIGR01321http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR01321
UniProtKB-ACP0A881http://www.uniprot.org/uniprot/P0A881
UniProtKBTRPR_ECOLIhttp://www.uniprot.org/uniprot/TRPR_ECOLI
chargeswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:TRPR_ECOLI
eggNOGCOG2973http://eggnogapi.embl.de/nog_data/html/tree/COG2973
eggNOGENOG4105R9Mhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105R9M
epestfindswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:TRPR_ECOLI
garnierswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:TRPR_ECOLI
helixturnhelixswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:TRPR_ECOLI
hmomentswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:TRPR_ECOLI
iepswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:TRPR_ECOLI
inforesidueswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:TRPR_ECOLI
octanolswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:TRPR_ECOLI
pepcoilswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:TRPR_ECOLI
pepdigestswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:TRPR_ECOLI
pepinfoswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:TRPR_ECOLI
pepnetswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:TRPR_ECOLI
pepstatsswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:TRPR_ECOLI
pepwheelswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:TRPR_ECOLI
pepwindowswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:TRPR_ECOLI
sigcleaveswissprot:TRPR_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:TRPR_ECOLI
DataBaseIDURL or Descriptions
# AltNameTopoisomerase IV subunit A {ECO:0000255|HAMAP-RuleMF_00936}
# CATALYTIC ACTIVITYPARC_ECOLIATP-dependent breakage, passage and rejoining of double-stranded DNA. {ECO 0000255|HAMAP-Rule MF_00936, ECO 0000269|PubMed 12269820, ECO 0000269|PubMed 16023670, ECO 0000269|PubMed 21300644}.
# DrugBankDB00817Rosoxacin
# ENZYME REGULATIONInhibited by quinolones. {ECO:0000269|PubMed12269820}.
# EcoGeneEG10686parC
# FUNCTIONPARC_ECOLITopoisomerase IV is essential for chromosome segregation; it is the principal protein responsible for decatenating newly replicated chromosomes (PubMed 9334322). It relaxes supercoiled DNA (PubMed 12269820, PuMed 16023670, PubMed 21300644). MukB stimulates the relaxation activity of topoisomerase IV and also has a modest effect on decatenation (PubMed 20921377). {ECO 0000269|PubMed 12269820, ECO 0000269|PubMed 16023670, ECO 0000269|PubMed 20921377, ECO 0000269|PubMed 21300644, ECO 0000269|PubMed 9334322}.
# GO_componentGO:0005694chromosome; IEA:InterPro.
# GO_componentGO:0005737cytoplasm; IDA:EcoliWiki.
# GO_componentGO:0005829cytosol; IDA:EcoCyc.
# GO_componentGO:0009295nucleoid; IBA:GO_Central.
# GO_componentGO:0009330DNA topoisomerase complex (ATP-hydrolyzing); IDA:EcoliWiki.
# GO_componentGO:0019897extrinsic component of plasma membrane; IDA:EcoliWiki.
# GO_functionGO:0003677DNA binding; IDA:EcoliWiki.
# GO_functionGO:0003918DNA topoisomerase type II (ATP-hydrolyzing) activity; IEA:UniProtKB-HAMAP.
# GO_functionGO:0005524ATP binding; IEA:InterPro.
# GO_processGO:0006265DNA topological change; IDA:EcoliWiki.
# GO_processGO:0006268DNA unwinding involved in DNA replication; IBA:GO_Central.
# GO_processGO:0007059chromosome segregation; IDA:EcoliWiki.
# GO_processGO:0007062sister chromatid cohesion; IMP:EcoliWiki.
# GO_processGO:0030541plasmid partitioning; IDA:EcoliWiki.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005694chromosome
# GOslim_componentGO:0005737cytoplasm
# GOslim_componentGO:0005829cytosol
# GOslim_componentGO:0043234protein complex
# GOslim_functionGO:0003677DNA binding
# GOslim_functionGO:0016853isomerase activity
# GOslim_functionGO:0016887ATPase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006259DNA metabolic process
# GOslim_processGO:0007059chromosome segregation
# GOslim_processGO:0008150biological_process
# GOslim_processGO:0051276chromosome organization
# Gene3D3.30.1360.40-; 1.
# Gene3D3.90.199.10-; 2.
# HAMAPMF_00936ParC_type1
# INTERACTIONPARC_ECOLIP22523 mukB; NbExp=7; IntAct=EBI-878544, EBI-542943;
# IntActP0AFI223
# InterProIPR002205Topo_IIA_A/C
# InterProIPR005742TopoIV_A_Gneg
# InterProIPR006691GyrA/parC_pinwhl
# InterProIPR013758Topo_IIA_A/C_ab
# InterProIPR013760Topo_IIA-like_dom
# InterProIPR024946Arg_repress_C-like
# KEGG_Briteko01000Enzymes
# KEGG_Briteko03032 DNA replication proteins
# KEGG_Briteko03036 Chromosome
# OrganismPARC_ECOLIEscherichia coli (strain K12)
# PATRIC32121452VBIEscCol129921_3113
# PDB1ZVTX-ray; 1.70 A; A/B=497-752
# PDB1ZVUX-ray; 3.00 A; A=27-742
# PDB4MN4X-ray; 2.30 A; A/B=497-752
# PIRA65089A65089
# PfamPF00521DNA_topoisoIV
# PfamPF03989DNA_gyraseA_C; 2
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameDNA topoisomerase 4 subunit A {ECO:0000255|HAMAP-RuleMF_00936}
# RefSeqNP_417491NC_000913.3
# RefSeqWP_001281881NZ_LN832404.1
# SEQUENCE CAUTIONSequence=AAA24297.1; Type=Frameshift; Positions=10; Evidence={ECO0000305};
# SIMILARITYBelongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. {ECO:0000255|HAMAP-RuleMF_00936}.
# SMARTSM00434TOP4c
# SUBCELLULAR LOCATIONPARC_ECOLICell membrane; Peripheral membrane protein.
# SUBUNITPARC_ECOLIHeterotetramer composed of ParC and ParE. Interacts with MukB. {ECO 0000255|HAMAP-Rule MF_00936, ECO 0000269|PubMed 16023670, ECO 0000269|PubMed 20921377, ECO 0000269|PubMed 21300644, ECO 0000269|PubMed 8227000}.
# SUPFAMSSF56719SSF56719
# eggNOGCOG0188LUCA
# eggNOGENOG4105C24Bacteria
BLASTswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:PARC_ECOLI
BioCycECOL316407:JW2987-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2987-MONOMER
BioCycEcoCyc:EG10686-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG10686-MONOMER
COGCOG0188http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0188
DIPDIP-36030Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-36030N
DOI10.1016/0092-8674(90)90172-Bhttp://dx.doi.org/10.1016/0092-8674(90)90172-B
DOI10.1016/j.jmb.2005.06.029http://dx.doi.org/10.1016/j.jmb.2005.06.029
DOI10.1021/bi026352vhttp://dx.doi.org/10.1021/bi026352v
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.1008678107http://dx.doi.org/10.1073/pnas.1008678107
DOI10.1093/nar/gkr018http://dx.doi.org/10.1093/nar/gkr018
DOI10.1101/gad.11.19.2580http://dx.doi.org/10.1101/gad.11.19.2580
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DrugBankDB00817http://www.drugbank.ca/drugs/DB00817
EC_numberEC:5.99.1.3 {ECO:0000255|HAMAP-Rule:MF_00936}http://www.genome.jp/dbget-bin/www_bget?EC:5.99.1.3 {ECO:0000255|HAMAP-Rule:MF_00936}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLL22025http://www.ebi.ac.uk/ena/data/view/L22025
EMBLM58408http://www.ebi.ac.uk/ena/data/view/M58408
EMBLM63491http://www.ebi.ac.uk/ena/data/view/M63491
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU28377http://www.ebi.ac.uk/ena/data/view/U28377
ENZYME5.99.1.3 {ECO:0000255|HAMAP-Rule:MF_00936}http://enzyme.expasy.org/EC/5.99.1.3 {ECO:0000255|HAMAP-Rule:MF_00936}
EchoBASEEB0680http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0680
EcoGeneEG10686http://www.ecogene.org/geneInfo.php?eg_id=EG10686
EnsemblBacteriaAAC76055http://www.ensemblgenomes.org/id/AAC76055
EnsemblBacteriaAAC76055http://www.ensemblgenomes.org/id/AAC76055
EnsemblBacteriaBAE77075http://www.ensemblgenomes.org/id/BAE77075
EnsemblBacteriaBAE77075http://www.ensemblgenomes.org/id/BAE77075
EnsemblBacteriaBAE77075http://www.ensemblgenomes.org/id/BAE77075
EnsemblBacteriab3019http://www.ensemblgenomes.org/id/b3019
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005694http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005694
GO_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_componentGO:0009295http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009295
GO_componentGO:0009330http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009330
GO_componentGO:0019897http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0019897
GO_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GO_functionGO:0003918http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003918
GO_functionGO:0005524http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005524
GO_processGO:0006265http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006265
GO_processGO:0006268http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006268
GO_processGO:0007059http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0007059
GO_processGO:0007062http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0007062
GO_processGO:0030541http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030541
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005694http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005694
GOslim_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_componentGO:0043234http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043234
GOslim_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GOslim_functionGO:0016853http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016853
GOslim_functionGO:0016887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016887
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006259http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006259
GOslim_processGO:0007059http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0007059
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
GOslim_processGO:0051276http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0051276
Gene3D3.30.1360.40http://www.cathdb.info/version/latest/superfamily/3.30.1360.40
Gene3D3.90.199.10http://www.cathdb.info/version/latest/superfamily/3.90.199.10
GeneID947499http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947499
HAMAPMF_00936http://hamap.expasy.org/unirule/MF_00936
HOGENOMHOG000076277http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000076277&db=HOGENOM6
InParanoidP0AFI2http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AFI2
IntActP0AFI2http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AFI2*
IntEnz5.99.1.3 {ECO:0000255|HAMAP-Rule:MF_00936}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=5.99.1.3 {ECO:0000255|HAMAP-Rule:MF_00936}
InterProIPR002205http://www.ebi.ac.uk/interpro/entry/IPR002205
InterProIPR005742http://www.ebi.ac.uk/interpro/entry/IPR005742
InterProIPR006691http://www.ebi.ac.uk/interpro/entry/IPR006691
InterProIPR013758http://www.ebi.ac.uk/interpro/entry/IPR013758
InterProIPR013760http://www.ebi.ac.uk/interpro/entry/IPR013760
InterProIPR024946http://www.ebi.ac.uk/interpro/entry/IPR024946
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Briteko03032http://www.genome.jp/dbget-bin/www_bget?ko03032
KEGG_Briteko03036http://www.genome.jp/dbget-bin/www_bget?ko03036
KEGG_Geneecj:JW2987http://www.genome.jp/dbget-bin/www_bget?ecj:JW2987
KEGG_Geneeco:b3019http://www.genome.jp/dbget-bin/www_bget?eco:b3019
KEGG_OrthologyKO:K02621http://www.genome.jp/dbget-bin/www_bget?KO:K02621
MINTMINT-1227290http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1227290
OMARFTEDAYhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=RFTEDAY
PDB1ZVThttp://www.ebi.ac.uk/pdbe-srv/view/entry/1ZVT
PDB1ZVUhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1ZVU
PDB4MN4http://www.ebi.ac.uk/pdbe-srv/view/entry/4MN4
PDBsum1ZVThttp://www.ebi.ac.uk/pdbsum/1ZVT
PDBsum1ZVUhttp://www.ebi.ac.uk/pdbsum/1ZVU
PDBsum4MN4http://www.ebi.ac.uk/pdbsum/4MN4
PSORT-Bswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:PARC_ECOLI
PSORT2swissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:PARC_ECOLI
PSORTswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:PARC_ECOLI
PfamPF00521http://pfam.xfam.org/family/PF00521
PfamPF03989http://pfam.xfam.org/family/PF03989
Phobiusswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:PARC_ECOLI
PhylomeDBP0AFI2http://phylomedb.org/?seqid=P0AFI2
ProteinModelPortalP0AFI2http://www.proteinmodelportal.org/query/uniprot/P0AFI2
PubMed12269820http://www.ncbi.nlm.nih.gov/pubmed/12269820
PubMed1557036http://www.ncbi.nlm.nih.gov/pubmed/1557036
PubMed16023670http://www.ncbi.nlm.nih.gov/pubmed/16023670
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed20921377http://www.ncbi.nlm.nih.gov/pubmed/20921377
PubMed21300644http://www.ncbi.nlm.nih.gov/pubmed/21300644
PubMed2170028http://www.ncbi.nlm.nih.gov/pubmed/2170028
PubMed8227000http://www.ncbi.nlm.nih.gov/pubmed/8227000
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9334322http://www.ncbi.nlm.nih.gov/pubmed/9334322
RefSeqNP_417491http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417491
RefSeqWP_001281881http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001281881
SMARTSM00434http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00434
SMRP0AFI2http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0AFI2
STRING511145.b3019http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3019&targetmode=cogs
STRINGCOG0188http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0188&targetmode=cogs
SUPFAMSSF56719http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF56719
UniProtKB-ACP0AFI2http://www.uniprot.org/uniprot/P0AFI2
UniProtKBPARC_ECOLIhttp://www.uniprot.org/uniprot/PARC_ECOLI
chargeswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:PARC_ECOLI
eggNOGCOG0188http://eggnogapi.embl.de/nog_data/html/tree/COG0188
eggNOGENOG4105C24http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105C24
epestfindswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:PARC_ECOLI
garnierswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:PARC_ECOLI
helixturnhelixswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:PARC_ECOLI
hmomentswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:PARC_ECOLI
iepswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:PARC_ECOLI
inforesidueswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:PARC_ECOLI
octanolswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:PARC_ECOLI
pepcoilswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:PARC_ECOLI
pepdigestswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:PARC_ECOLI
pepinfoswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:PARC_ECOLI
pepnetswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:PARC_ECOLI
pepstatsswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:PARC_ECOLI
pepwheelswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:PARC_ECOLI
pepwindowswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:PARC_ECOLI
sigcleaveswissprot:PARC_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:PARC_ECOLI
DataBaseIDURL or Descriptions
# BioGrid42600928
# CDDcd06261TM_PBP2
# EcoGeneEG10751potC
# FUNCTIONPOTC_ECOLIRequired for the activity of the bacterial periplasmic transport system of putrescine and spermidine.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0015417polyamine-transporting ATPase activity; IMP:EcoCyc.
# GO_processGO:0015846polyamine transport; IMP:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0016887ATPase activity
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# Gene3D1.10.3720.10-; 1.
# InterProIPR000515MetI-like
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00299 Spermidine/putrescine transport system
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02010ABC transporters
# OrganismPOTC_ECOLIEscherichia coli (strain K12)
# PATRIC32117495VBIEscCol129921_1170
# PIRC40840C40840
# PROSITEPS50928ABC_TM1
# PfamPF00528BPD_transp_1
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNamePOTC_ECOLISpermidine/putrescine transport system permease protein PotC
# RefSeqNP_415642NC_000913.3
# RefSeqWP_000580316NZ_LN832404.1
# SIMILARITYBelongs to the binding-protein-dependent transport system permease family. CysTW subfamily. {ECO0000305}.
# SIMILARITYContains 1 ABC transmembrane type-1 domain. {ECO:0000255|PROSITE-ProRulePRU00441}.
# SUBCELLULAR LOCATIONPOTC_ECOLICell inner membrane {ECO 0000269|PubMed 15919996}; Multi-pass membrane protein {ECO 0000255|PROSITE-ProRule PRU00441, ECO 0000269|PubMed 15919996}.
# SUPFAMSSF161098SSF161098
# TCDB3.A.1.11the atp-binding cassette (abc) superfamily
# eggNOGCOG1177LUCA
# eggNOGENOG4105D38Bacteria
BLASTswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:POTC_ECOLI
BioCycECOL316407:JW1110-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1110-MONOMER
BioCycEcoCyc:POTC-MONOMERhttp://biocyc.org/getid?id=EcoCyc:POTC-MONOMER
BioCycMetaCyc:POTC-MONOMERhttp://biocyc.org/getid?id=MetaCyc:POTC-MONOMER
COGCOG1177http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1177
DIPDIP-48152Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-48152N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM64519http://www.ebi.ac.uk/ena/data/view/M64519
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB0744http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0744
EcoGeneEG10751http://www.ecogene.org/geneInfo.php?eg_id=EG10751
EnsemblBacteriaAAC74208http://www.ensemblgenomes.org/id/AAC74208
EnsemblBacteriaAAC74208http://www.ensemblgenomes.org/id/AAC74208
EnsemblBacteriaBAA35944http://www.ensemblgenomes.org/id/BAA35944
EnsemblBacteriaBAA35944http://www.ensemblgenomes.org/id/BAA35944
EnsemblBacteriaBAA35944http://www.ensemblgenomes.org/id/BAA35944
EnsemblBacteriab1124http://www.ensemblgenomes.org/id/b1124
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0015417http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015417
GO_processGO:0015846http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015846
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0016887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016887
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
Gene3D1.10.3720.10http://www.cathdb.info/version/latest/superfamily/1.10.3720.10
GeneID945691http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945691
HOGENOMHOG000263700http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000263700&db=HOGENOM6
InParanoidP0AFK6http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AFK6
IntActP0AFK6http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AFK6*
InterProIPR000515http://www.ebi.ac.uk/interpro/entry/IPR000515
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW1110http://www.genome.jp/dbget-bin/www_bget?ecj:JW1110
KEGG_Geneeco:b1124http://www.genome.jp/dbget-bin/www_bget?eco:b1124
KEGG_OrthologyKO:K11070http://www.genome.jp/dbget-bin/www_bget?KO:K11070
KEGG_Pathwayko02010http://www.genome.jp/kegg-bin/show_pathway?ko02010
MINTMINT-1315836http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1315836
OMANWYSLLMhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=NWYSLLM
PROSITEPS50928http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50928
PSORT-Bswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:POTC_ECOLI
PSORT2swissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:POTC_ECOLI
PSORTswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:POTC_ECOLI
PfamPF00528http://pfam.xfam.org/family/PF00528
Phobiusswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:POTC_ECOLI
PhylomeDBP0AFK6http://phylomedb.org/?seqid=P0AFK6
ProteinModelPortalP0AFK6http://www.proteinmodelportal.org/query/uniprot/P0AFK6
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed1939142http://www.ncbi.nlm.nih.gov/pubmed/1939142
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415642http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415642
RefSeqWP_000580316http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000580316
STRING511145.b1124http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1124&targetmode=cogs
STRINGCOG1177http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1177&targetmode=cogs
SUPFAMSSF161098http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF161098
TCDB3.A.1.11http://www.tcdb.org/search/result.php?tc=3.A.1.11
UniProtKB-ACP0AFK6http://www.uniprot.org/uniprot/P0AFK6
UniProtKBPOTC_ECOLIhttp://www.uniprot.org/uniprot/POTC_ECOLI
chargeswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:POTC_ECOLI
eggNOGCOG1177http://eggnogapi.embl.de/nog_data/html/tree/COG1177
eggNOGENOG4105D38http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105D38
epestfindswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:POTC_ECOLI
garnierswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:POTC_ECOLI
helixturnhelixswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:POTC_ECOLI
hmomentswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:POTC_ECOLI
iepswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:POTC_ECOLI
inforesidueswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:POTC_ECOLI
octanolswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:POTC_ECOLI
pepcoilswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:POTC_ECOLI
pepdigestswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:POTC_ECOLI
pepinfoswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:POTC_ECOLI
pepnetswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:POTC_ECOLI
pepstatsswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:POTC_ECOLI
pepwheelswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:POTC_ECOLI
pepwindowswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:POTC_ECOLI
sigcleaveswissprot:POTC_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:POTC_ECOLI
DataBaseIDURL or Descriptions
# AltNameEIIC-Chb {ECO:0000303|PubMed2092358}
# AltNameIIcel {ECO:0000303|PubMed2179047}
# AltNameN,N'-diacetylchitobiose-specific phosphotransferase enzyme IIC component {ECO:0000303|PubMed2092358}
# BioGrid426031519
# CAUTIONWas originally (PubMed:2179047) characterized as part of a cryptic cel operon for a cellobiose degradation system. The Cel+ phenotype is due to mutations making expression chitobiose- independent and altering the substrate specificity. {ECO0000305|PubMed:2179047}.
# DOMAINPTQC_ECOLIThe EIIC type-3 domain forms the PTS system translocation channel and contains the specific substrate-binding site. {ECO 0000255|PROSITE-ProRule PRU00428}.
# EcoGeneEG10141chbC
# FUNCTIONPTQC_ECOLIThe phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II ChbABC PTS system is involved in the transport of the chitin disaccharide N,N'-diacetylchitobiose (GlcNAc2) (PubMed 10913117). Also able to use N,N',N''-triacetyl chitotriose (GlcNAc3) (PubMed 10913117). {ECO 0000269|PubMed 10913117, ECO 0000305|PubMed 2092358}.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0008982protein-N(PI)-phosphohistidine-sugar phosphotransferase activity; IEA:InterPro.
# GO_processGO:0009401phosphoenolpyruvate-dependent sugar phosphotransferase system; IEA:UniProtKB-KW.
# GO_processGO:1902815N,N'-diacetylchitobiose import; IDA:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# INDUCTIONBy GlcNAc2, GlcNAc3 and beta-N,N'-diacetylchitobiose (Me-TCB). {ECO:0000269|PubMed10913117}.
# InterProIPR003352PTS_EIIC
# InterProIPR004501PTS_EIIC_3
# InterProIPR004796PTS_IIC_cello
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00275 PTS system, cellobiose-specific II component
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02060Phosphotransferase system (PTS)
# OrganismPTQC_ECOLIEscherichia coli (strain K12)
# PATRIC32118783VBIEscCol129921_1809
# PIRA64933A64933
# PIRS10871S10871
# PIRSFPIRSF006351PTS_EIIC-Cellobiose
# PROSITEPS51105PTS_EIIC_TYPE_3
# PfamPF02378PTS_EIIC
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNamePTS system N,N'-diacetylchitobiose-specific EIIC component {ECO:0000303|PubMed2092358}
# RefSeqNP_416251NC_000913.3
# RefSeqWP_000073041NZ_LN832404.1
# SIMILARITYContains 1 PTS EIIC type-3 domain. {ECO:0000255|PROSITE-ProRulePRU00428}.
# SUBCELLULAR LOCATIONPTQC_ECOLICell inner membrane {ECO 0000255|PROSITE- ProRule PRU00428}; Multi-pass membrane protein {ECO 0000255|PROSITE-ProRule PRU00428}.
# TCDB4.A.3.2the pts lactose-n,n'-diacetylchitobiose-Beta-glucoside (lac) family
# TIGRFAMsTIGR00359cello_pts_IIC
# TIGRFAMsTIGR00410lacE
# eggNOGCOG1455LUCA
# eggNOGENOG4105CK1Bacteria
BLASTswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:PTQC_ECOLI
BioCycECOL316407:JW1726-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1726-MONOMER
BioCycEcoCyc:CELB-MONOMERhttp://biocyc.org/getid?id=EcoCyc:CELB-MONOMER
BioCycMetaCyc:CELB-MONOMERhttp://biocyc.org/getid?id=MetaCyc:CELB-MONOMER
COGCOG1455http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1455
DIPDIP-9264Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9264N
DOI10.1016/0923-2508(90)90079-6http://dx.doi.org/10.1016/0923-2508(90)90079-6
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.94.26.14367http://dx.doi.org/10.1073/pnas.94.26.14367
DOI10.1074/jbc.M001043200http://dx.doi.org/10.1074/jbc.M001043200
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX52890http://www.ebi.ac.uk/ena/data/view/X52890
EchoBASEEB0139http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0139
EcoGeneEG10141http://www.ecogene.org/geneInfo.php?eg_id=EG10141
EnsemblBacteriaAAC74807http://www.ensemblgenomes.org/id/AAC74807
EnsemblBacteriaAAC74807http://www.ensemblgenomes.org/id/AAC74807
EnsemblBacteriaBAA15518http://www.ensemblgenomes.org/id/BAA15518
EnsemblBacteriaBAA15518http://www.ensemblgenomes.org/id/BAA15518
EnsemblBacteriaBAA15518http://www.ensemblgenomes.org/id/BAA15518
EnsemblBacteriab1737http://www.ensemblgenomes.org/id/b1737
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0008982http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008982
GO_processGO:0009401http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009401
GO_processGO:1902815http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:1902815
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GeneID945982http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945982
HOGENOMHOG000224102http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000224102&db=HOGENOM6
InParanoidP17334http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P17334
IntActP17334http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P17334*
InterProIPR003352http://www.ebi.ac.uk/interpro/entry/IPR003352
InterProIPR004501http://www.ebi.ac.uk/interpro/entry/IPR004501
InterProIPR004796http://www.ebi.ac.uk/interpro/entry/IPR004796
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW1726http://www.genome.jp/dbget-bin/www_bget?ecj:JW1726
KEGG_Geneeco:b1737http://www.genome.jp/dbget-bin/www_bget?eco:b1737
KEGG_OrthologyKO:K02761http://www.genome.jp/dbget-bin/www_bget?KO:K02761
KEGG_Pathwayko02060http://www.genome.jp/kegg-bin/show_pathway?ko02060
OMAMAIKLPEhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=MAIKLPE
PROSITEPS51105http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51105
PSORT-Bswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:PTQC_ECOLI
PSORT2swissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:PTQC_ECOLI
PSORTswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:PTQC_ECOLI
PfamPF02378http://pfam.xfam.org/family/PF02378
Phobiusswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:PTQC_ECOLI
PhylomeDBP17334http://phylomedb.org/?seqid=P17334
ProteinModelPortalP17334http://www.proteinmodelportal.org/query/uniprot/P17334
PubMed10913117http://www.ncbi.nlm.nih.gov/pubmed/10913117
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2092358http://www.ncbi.nlm.nih.gov/pubmed/2092358
PubMed2179047http://www.ncbi.nlm.nih.gov/pubmed/2179047
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9405618http://www.ncbi.nlm.nih.gov/pubmed/9405618
RefSeqNP_416251http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416251
RefSeqWP_000073041http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000073041
STRING511145.b1737http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1737&targetmode=cogs
STRINGCOG1455http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1455&targetmode=cogs
TCDB4.A.3.2http://www.tcdb.org/search/result.php?tc=4.A.3.2
TIGRFAMsTIGR00359http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00359
TIGRFAMsTIGR00410http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00410
UniProtKB-ACP17334http://www.uniprot.org/uniprot/P17334
UniProtKBPTQC_ECOLIhttp://www.uniprot.org/uniprot/PTQC_ECOLI
chargeswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:PTQC_ECOLI
eggNOGCOG1455http://eggnogapi.embl.de/nog_data/html/tree/COG1455
eggNOGENOG4105CK1http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105CK1
epestfindswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:PTQC_ECOLI
garnierswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:PTQC_ECOLI
helixturnhelixswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:PTQC_ECOLI
hmomentswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:PTQC_ECOLI
iepswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:PTQC_ECOLI
inforesidueswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:PTQC_ECOLI
octanolswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:PTQC_ECOLI
pepcoilswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:PTQC_ECOLI
pepdigestswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:PTQC_ECOLI
pepinfoswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:PTQC_ECOLI
pepnetswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:PTQC_ECOLI
pepstatsswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:PTQC_ECOLI
pepwheelswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:PTQC_ECOLI
pepwindowswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:PTQC_ECOLI
sigcleaveswissprot:PTQC_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:PTQC_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426218912
# EcoGeneEG11097yajD
# GO_componentGO:0005829cytosol; IDA:EcoCyc.
# GO_functionGO:0003676nucleic acid binding; IEA:InterPro.
# GO_functionGO:0004519endonuclease activity; IEA:InterPro.
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0004518nuclease activity
# IntActP0AAQ211
# InterProIPR002711HNH
# InterProIPR003615HNH_nuc
# OrganismYAJD_ECOLIEscherichia coli (strain K12)
# PATRIC32115969VBIEscCol129921_0426
# PIRB64770B64770
# PfamPF01844HNH
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYAJD_ECOLIUncharacterized protein YajD
# RefSeqNP_414944NC_000913.3
# RefSeqWP_000974813NZ_LN832404.1
# SIMILARITYContains 1 HNH domain. {ECO0000305}.
# SMARTSM00507HNHc
# eggNOGENOG4105N1FBacteria
# eggNOGENOG4111U2ELUCA
BLASTswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YAJD_ECOLI
BioCycECOL316407:JW0400-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0400-MONOMER
BioCycEcoCyc:EG11097-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11097-MONOMER
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU82664http://www.ebi.ac.uk/ena/data/view/U82664
EMBLX56175http://www.ebi.ac.uk/ena/data/view/X56175
EchoBASEEB1089http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1089
EcoGeneEG11097http://www.ecogene.org/geneInfo.php?eg_id=EG11097
EnsemblBacteriaAAC73513http://www.ensemblgenomes.org/id/AAC73513
EnsemblBacteriaAAC73513http://www.ensemblgenomes.org/id/AAC73513
EnsemblBacteriaBAE76190http://www.ensemblgenomes.org/id/BAE76190
EnsemblBacteriaBAE76190http://www.ensemblgenomes.org/id/BAE76190
EnsemblBacteriaBAE76190http://www.ensemblgenomes.org/id/BAE76190
EnsemblBacteriab0410http://www.ensemblgenomes.org/id/b0410
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_functionGO:0003676http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003676
GO_functionGO:0004519http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004519
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0004518http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004518
GeneID945051http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945051
HOGENOMHOG000294005http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000294005&db=HOGENOM6
InParanoidP0AAQ2http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AAQ2
IntActP0AAQ2http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AAQ2*
InterProIPR002711http://www.ebi.ac.uk/interpro/entry/IPR002711
InterProIPR003615http://www.ebi.ac.uk/interpro/entry/IPR003615
KEGG_Geneecj:JW0400http://www.genome.jp/dbget-bin/www_bget?ecj:JW0400
KEGG_Geneeco:b0410http://www.genome.jp/dbget-bin/www_bget?eco:b0410
OMADLKSMLNhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=DLKSMLN
PSORT-Bswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YAJD_ECOLI
PSORT2swissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YAJD_ECOLI
PSORTswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YAJD_ECOLI
PfamPF01844http://pfam.xfam.org/family/PF01844
Phobiusswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YAJD_ECOLI
ProteinModelPortalP0AAQ2http://www.proteinmodelportal.org/query/uniprot/P0AAQ2
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2170107http://www.ncbi.nlm.nih.gov/pubmed/2170107
PubMed2249673http://www.ncbi.nlm.nih.gov/pubmed/2249673
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_414944http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_414944
RefSeqWP_000974813http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000974813
SMARTSM00507http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00507
STRING511145.b0410http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0410&targetmode=cogs
UniProtKB-ACP0AAQ2http://www.uniprot.org/uniprot/P0AAQ2
UniProtKBYAJD_ECOLIhttp://www.uniprot.org/uniprot/YAJD_ECOLI
chargeswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YAJD_ECOLI
eggNOGENOG4105N1Fhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105N1F
eggNOGENOG4111U2Ehttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4111U2E
epestfindswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YAJD_ECOLI
garnierswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YAJD_ECOLI
helixturnhelixswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YAJD_ECOLI
hmomentswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YAJD_ECOLI
iepswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YAJD_ECOLI
inforesidueswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YAJD_ECOLI
octanolswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YAJD_ECOLI
pepcoilswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YAJD_ECOLI
pepdigestswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YAJD_ECOLI
pepinfoswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YAJD_ECOLI
pepnetswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YAJD_ECOLI
pepstatsswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YAJD_ECOLI
pepwheelswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YAJD_ECOLI
pepwindowswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YAJD_ECOLI
sigcleaveswissprot:YAJD_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YAJD_ECOLI
DataBaseIDURL or Descriptions
# AltNameRare lipoprotein A {ECO:0000303|PubMed3316191}
# BioGrid4260680169
# DISRUPTION PHENOTYPEDeletion does not result in any obvious growth or division defects. {ECO:0000269|PubMed19684127}.
# DOMAINRLPA_ECOLIThe SPOR domain binds septal peptidoglycans and is required to target RlpA to the septal ring. {ECO 0000269|PubMed 19880599}.
# EcoGeneEG10854rlpA
# FUNCTIONRLPA_ECOLILytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. {ECO 0000255|HAMAP- Rule MF_02071}.
# GO_componentGO:0005886plasma membrane; IEA:UniProtKB-SubCell.
# GO_componentGO:0009279cell outer membrane; IDA:EcoCyc.
# GO_functionGO:0016829lyase activity; IEA:UniProtKB-KW.
# GO_functionGO:0042834peptidoglycan binding; IEA:InterPro.
# GO_processGO:0071555cell wall organization; IEA:UniProtKB-KW.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0016829lyase activity
# GOslim_processGO:0071554cell wall organization or biogenesis
# Gene3D3.30.70.1070-; 1.
# HAMAPMF_02071RlpA
# InterProIPR007730SPOR_dom
# InterProIPR009009RlpA-like_DPBB
# InterProIPR012997RplA
# OrganismRLPA_ECOLIEscherichia coli (strain K12)
# PATRIC32116449VBIEscCol129921_0664
# PIRA28387LPECRA
# PROSITEPS51257PROKAR_LIPOPROTEIN
# PROSITEPS51724SPOR
# PfamPF03330DPBB_1
# PfamPF05036SPOR
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameEndolytic peptidoglycan transglycosylase RlpA {ECO:0000255|HAMAP-RuleMF_02071}
# RefSeqNP_415166NC_000913.3
# RefSeqWP_001231430NZ_LN832404.1
# SIMILARITYBelongs to the RlpA family. {ECO:0000255|HAMAP- RuleMF_02071}.
# SIMILARITYContains 1 SPOR domain. {ECO:0000255|HAMAP- RuleMF_02071}.
# SUBCELLULAR LOCATIONRLPA_ECOLICell membrane {ECO 0000255|HAMAP- Rule MF_02071}; Lipid-anchor {ECO 0000255|HAMAP-Rule MF_02071, ECO 0000305|PubMed 3316191}. Note=Localizes at the septal ring. Is also associated with some other structures/complexes along the cell cylinder. {ECO 0000269|PubMed 19684127, ECO 0000269|PubMed 19880599}.
# SUPFAMSSF110997SSF110997
# SUPFAMSSF50685SSF50685
# TIGRFAMsTIGR00413rlpA
# eggNOGCOG0797LUCA
# eggNOGENOG4105K6TBacteria
BLASTswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:RLPA_ECOLI
BioCycECOL316407:JW0628-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0628-MONOMER
BioCycEcoCyc:EG10854-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG10854-MONOMER
COGCOG0797http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0797
DOI10.1002/elps.1150180805http://dx.doi.org/10.1002/elps.1150180805
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1128/JB.00811-09http://dx.doi.org/10.1128/JB.00811-09
DOI10.1128/JB.01244-09http://dx.doi.org/10.1128/JB.01244-09
EC_numberEC:4.2.2.- {ECO:0000255|HAMAP-Rule:MF_02071}http://www.genome.jp/dbget-bin/www_bget?EC:4.2.2.- {ECO:0000255|HAMAP-Rule:MF_02071}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM18276http://www.ebi.ac.uk/ena/data/view/M18276
EMBLM22857http://www.ebi.ac.uk/ena/data/view/M22857
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU82598http://www.ebi.ac.uk/ena/data/view/U82598
ENZYME4.2.2.- {ECO:0000255|HAMAP-Rule:MF_02071}http://enzyme.expasy.org/EC/4.2.2.- {ECO:0000255|HAMAP-Rule:MF_02071}
EchoBASEEB0847http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0847
EcoGeneEG10854http://www.ecogene.org/geneInfo.php?eg_id=EG10854
EnsemblBacteriaAAC73734http://www.ensemblgenomes.org/id/AAC73734
EnsemblBacteriaAAC73734http://www.ensemblgenomes.org/id/AAC73734
EnsemblBacteriaBAA35276http://www.ensemblgenomes.org/id/BAA35276
EnsemblBacteriaBAA35276http://www.ensemblgenomes.org/id/BAA35276
EnsemblBacteriaBAA35276http://www.ensemblgenomes.org/id/BAA35276
EnsemblBacteriab0633http://www.ensemblgenomes.org/id/b0633
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0009279http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009279
GO_functionGO:0016829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016829
GO_functionGO:0042834http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042834
GO_processGO:0071555http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0071555
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0016829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016829
GOslim_processGO:0071554http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0071554
Gene3D3.30.70.1070http://www.cathdb.info/version/latest/superfamily/3.30.70.1070
GeneID945241http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945241
HAMAPMF_02071http://hamap.expasy.org/unirule/MF_02071
HOGENOMHOG000117956http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000117956&db=HOGENOM6
InParanoidP10100http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P10100
IntActP10100http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P10100*
IntEnz4.2.2.- {ECO:0000255|HAMAP-Rule:MF_02071}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=4.2.2.- {ECO:0000255|HAMAP-Rule:MF_02071}
InterProIPR007730http://www.ebi.ac.uk/interpro/entry/IPR007730
InterProIPR009009http://www.ebi.ac.uk/interpro/entry/IPR009009
InterProIPR012997http://www.ebi.ac.uk/interpro/entry/IPR012997
KEGG_Geneecj:JW0628http://www.genome.jp/dbget-bin/www_bget?ecj:JW0628
KEGG_Geneeco:b0633http://www.genome.jp/dbget-bin/www_bget?eco:b0633
KEGG_OrthologyKO:K03642http://www.genome.jp/dbget-bin/www_bget?KO:K03642
OMAQSFIAVAhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=QSFIAVA
PROSITEPS51257http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51257
PROSITEPS51724http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51724
PSORT-Bswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:RLPA_ECOLI
PSORT2swissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:RLPA_ECOLI
PSORTswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:RLPA_ECOLI
PfamPF03330http://pfam.xfam.org/family/PF03330
PfamPF05036http://pfam.xfam.org/family/PF05036
Phobiusswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:RLPA_ECOLI
ProteinModelPortalP10100http://www.proteinmodelportal.org/query/uniprot/P10100
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed19684127http://www.ncbi.nlm.nih.gov/pubmed/19684127
PubMed19880599http://www.ncbi.nlm.nih.gov/pubmed/19880599
PubMed2644207http://www.ncbi.nlm.nih.gov/pubmed/2644207
PubMed3316191http://www.ncbi.nlm.nih.gov/pubmed/3316191
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9298644http://www.ncbi.nlm.nih.gov/pubmed/9298644
RefSeqNP_415166http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415166
RefSeqWP_001231430http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001231430
SMRP10100http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P10100
STRING511145.b0633http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0633&targetmode=cogs
STRINGCOG0797http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0797&targetmode=cogs
SUPFAMSSF110997http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF110997
SUPFAMSSF50685http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF50685
TIGRFAMsTIGR00413http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00413
UniProtKB-ACP10100http://www.uniprot.org/uniprot/P10100
UniProtKBRLPA_ECOLIhttp://www.uniprot.org/uniprot/RLPA_ECOLI
chargeswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:RLPA_ECOLI
eggNOGCOG0797http://eggnogapi.embl.de/nog_data/html/tree/COG0797
eggNOGENOG4105K6Thttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105K6T
epestfindswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:RLPA_ECOLI
garnierswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:RLPA_ECOLI
helixturnhelixswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:RLPA_ECOLI
hmomentswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:RLPA_ECOLI
iepswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:RLPA_ECOLI
inforesidueswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:RLPA_ECOLI
octanolswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:RLPA_ECOLI
pepcoilswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:RLPA_ECOLI
pepdigestswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:RLPA_ECOLI
pepinfoswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:RLPA_ECOLI
pepnetswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:RLPA_ECOLI
pepstatsswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:RLPA_ECOLI
pepwheelswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:RLPA_ECOLI
pepwindowswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:RLPA_ECOLI
sigcleaveswissprot:RLPA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:RLPA_ECOLI
DataBaseIDURL or Descriptions
# BRENDA4.2.1.202026
# BioGrid42601299
# CATALYTIC ACTIVITYL-serine + 1-C-(indol-3-yl)glycerol 3- phosphate = L-tryptophan + D-glyceraldehyde 3-phosphate + H(2)O. {ECO:0000255|HAMAP-RuleMF_00131}.
# CDDcd04724Tryptophan_synthase_alpha
# EcoGeneEG11024trpA
# FUNCTIONTRPA_ECOLIThe alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate.
# GO_componentGO:0005737cytoplasm; IDA:EcoliWiki.
# GO_componentGO:0005829cytosol; IDA:EcoCyc.
# GO_functionGO:0004834tryptophan synthase activity; IEA:UniProtKB-HAMAP.
# GO_functionGO:0016829lyase activity; IDA:EcoCyc.
# GO_functionGO:0030170pyridoxal phosphate binding; IBA:GO_Central.
# GO_processGO:0000162tryptophan biosynthetic process; IMP:EcoliWiki.
# GO_processGO:0008652cellular amino acid biosynthetic process; IEA:UniProtKB-KW.
# GO_processGO:0009073aromatic amino acid family biosynthetic process; IMP:EcoliWiki.
# GOslim_componentGO:0005737cytoplasm
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0016829lyase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006520cellular amino acid metabolic process
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# Gene3D3.20.20.70-; 1.
# HAMAPMF_00131Trp_synth_alpha
# IntActP0A8776
# InterProIPR002028Trp_synthase_suA
# InterProIPR011060RibuloseP-bd_barrel
# InterProIPR013785Aldolase_TIM
# InterProIPR018204Trp_synthase_alpha_AS
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00260Glycine, serine and threonine metabolism
# KEGG_Pathwayko00400Phenylalanine, tyrosine and tryptophan biosynthesis
# OrganismTRPA_ECOLIEscherichia coli (strain K12)
# PATHWAYAmino-acid biosynthesis; L-tryptophan biosynthesis; L- tryptophan from chorismate: step 5/5. {ECO0000255|HAMAP- Rule:MF_00131}.
# PATRIC32117780VBIEscCol129921_1310
# PDB1V7YX-ray; 2.50 A; A/B=1-268
# PDB1WQ5X-ray; 2.30 A; A/B=1-268
# PDB1XC4X-ray; 2.80 A; A/B=1-268
# PDB1XCFX-ray; 1.80 A; A/B=1-268
# PIRE93746TSECA
# PROSITEPS00167TRP_SYNTHASE_ALPHA
# PfamPF00290Trp_syntA
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameTryptophan synthase alpha chain {ECO:0000255|HAMAP-RuleMF_00131}
# RefSeqNP_415776NC_000913.3
# RefSeqWP_000443067NZ_LN832404.1
# SIMILARITYBelongs to the TrpA family. {ECO:0000255|HAMAP- RuleMF_00131}.
# SUBUNITTRPA_ECOLITetramer of two alpha and two beta chains.
# SUPFAMSSF51366SSF51366
# TIGRFAMsTIGR00262trpA
# UniPathwayUPA00035UER00044
# eggNOGCOG0159LUCA
# eggNOGENOG4105F6HBacteria
BLASTswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:TRPA_ECOLI
BioCycECOL316407:JW1252-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1252-MONOMER
BioCycEcoCyc:TRYPSYN-APROTEINhttp://biocyc.org/getid?id=EcoCyc:TRYPSYN-APROTEIN
BioCycMetaCyc:TRYPSYN-APROTEINhttp://biocyc.org/getid?id=MetaCyc:TRYPSYN-APROTEIN
COGCOG0159http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0159
DIPDIP-35957Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-35957N
DOI10.1002/elps.1150180805http://dx.doi.org/10.1002/elps.1150180805
DOI10.1002/elps.1150180807http://dx.doi.org/10.1002/elps.1150180807
DOI10.1016/0300-9084(89)90089-8http://dx.doi.org/10.1016/0300-9084(89)90089-8
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.76.10.5244http://dx.doi.org/10.1073/pnas.76.10.5244
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1093/nar/9.24.6647http://dx.doi.org/10.1093/nar/9.24.6647
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DisProtDP00252http://www.disprot.org/protein.php?id=DP00252
EC_numberEC:4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131}http://www.genome.jp/dbget-bin/www_bget?EC:4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLJ01714http://www.ebi.ac.uk/ena/data/view/J01714
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU23489http://www.ebi.ac.uk/ena/data/view/U23489
EMBLU23490http://www.ebi.ac.uk/ena/data/view/U23490
EMBLU23491http://www.ebi.ac.uk/ena/data/view/U23491
EMBLU23492http://www.ebi.ac.uk/ena/data/view/U23492
EMBLU23494http://www.ebi.ac.uk/ena/data/view/U23494
EMBLU25417http://www.ebi.ac.uk/ena/data/view/U25417
EMBLU25418http://www.ebi.ac.uk/ena/data/view/U25418
EMBLU25419http://www.ebi.ac.uk/ena/data/view/U25419
EMBLU25420http://www.ebi.ac.uk/ena/data/view/U25420
EMBLU25421http://www.ebi.ac.uk/ena/data/view/U25421
EMBLU25422http://www.ebi.ac.uk/ena/data/view/U25422
EMBLV00364http://www.ebi.ac.uk/ena/data/view/V00364
EMBLV00372http://www.ebi.ac.uk/ena/data/view/V00372
EMBLX16698http://www.ebi.ac.uk/ena/data/view/X16698
ENZYME4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131}http://enzyme.expasy.org/EC/4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131}
EchoBASEEB1017http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1017
EcoGeneEG11024http://www.ecogene.org/geneInfo.php?eg_id=EG11024
EnsemblBacteriaAAC74342http://www.ensemblgenomes.org/id/AAC74342
EnsemblBacteriaAAC74342http://www.ensemblgenomes.org/id/AAC74342
EnsemblBacteriaBAA14792http://www.ensemblgenomes.org/id/BAA14792
EnsemblBacteriaBAA14792http://www.ensemblgenomes.org/id/BAA14792
EnsemblBacteriaBAA14792http://www.ensemblgenomes.org/id/BAA14792
EnsemblBacteriab1260http://www.ensemblgenomes.org/id/b1260
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_functionGO:0004834http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004834
GO_functionGO:0016829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016829
GO_functionGO:0030170http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030170
GO_processGO:0000162http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0000162
GO_processGO:0008652http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008652
GO_processGO:0009073http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009073
GOslim_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0016829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016829
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006520http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006520
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
Gene3D3.20.20.70http://www.cathdb.info/version/latest/superfamily/3.20.20.70
GeneID946204http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946204
HAMAPMF_00131http://hamap.expasy.org/unirule/MF_00131
HOGENOMHOG000223814http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000223814&db=HOGENOM6
InParanoidP0A877http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0A877
IntActP0A877http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0A877*
IntEnz4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131}
InterProIPR002028http://www.ebi.ac.uk/interpro/entry/IPR002028
InterProIPR011060http://www.ebi.ac.uk/interpro/entry/IPR011060
InterProIPR013785http://www.ebi.ac.uk/interpro/entry/IPR013785
InterProIPR018204http://www.ebi.ac.uk/interpro/entry/IPR018204
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW1252http://www.genome.jp/dbget-bin/www_bget?ecj:JW1252
KEGG_Geneeco:b1260http://www.genome.jp/dbget-bin/www_bget?eco:b1260
KEGG_OrthologyKO:K01695http://www.genome.jp/dbget-bin/www_bget?KO:K01695
KEGG_Pathwayko00260http://www.genome.jp/kegg-bin/show_pathway?ko00260
KEGG_Pathwayko00400http://www.genome.jp/kegg-bin/show_pathway?ko00400
KEGG_Reactionrn:R00674http://www.genome.jp/dbget-bin/www_bget?rn:R00674
KEGG_Reactionrn:R02340http://www.genome.jp/dbget-bin/www_bget?rn:R02340
KEGG_Reactionrn:R02722http://www.genome.jp/dbget-bin/www_bget?rn:R02722
OMADYNPHIPhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=DYNPHIP
PDB1V7Yhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1V7Y
PDB1WQ5http://www.ebi.ac.uk/pdbe-srv/view/entry/1WQ5
PDB1XC4http://www.ebi.ac.uk/pdbe-srv/view/entry/1XC4
PDB1XCFhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1XCF
PDBsum1V7Yhttp://www.ebi.ac.uk/pdbsum/1V7Y
PDBsum1WQ5http://www.ebi.ac.uk/pdbsum/1WQ5
PDBsum1XC4http://www.ebi.ac.uk/pdbsum/1XC4
PDBsum1XCFhttp://www.ebi.ac.uk/pdbsum/1XCF
PROSITEPS00167http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00167
PSORT-Bswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:TRPA_ECOLI
PSORT2swissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:TRPA_ECOLI
PSORTswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:TRPA_ECOLI
PfamPF00290http://pfam.xfam.org/family/PF00290
Phobiusswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:TRPA_ECOLI
PhylomeDBP0A877http://phylomedb.org/?seqid=P0A877
ProteinModelPortalP0A877http://www.proteinmodelportal.org/query/uniprot/P0A877
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2502189http://www.ncbi.nlm.nih.gov/pubmed/2502189
PubMed388433http://www.ncbi.nlm.nih.gov/pubmed/388433
PubMed4863752http://www.ncbi.nlm.nih.gov/pubmed/4863752
PubMed7038627http://www.ncbi.nlm.nih.gov/pubmed/7038627
PubMed8095913http://www.ncbi.nlm.nih.gov/pubmed/8095913
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9298644http://www.ncbi.nlm.nih.gov/pubmed/9298644
PubMed9298646http://www.ncbi.nlm.nih.gov/pubmed/9298646
RefSeqNP_415776http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415776
RefSeqWP_000443067http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000443067
SMRP0A877http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0A877
STRING511145.b1260http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1260&targetmode=cogs
STRINGCOG0159http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0159&targetmode=cogs
SUPFAMSSF51366http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF51366
SWISS-2DPAGEP0A877http://world-2dpage.expasy.org/swiss-2dpage/protein/ac=P0A877
TIGRFAMsTIGR00262http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00262
UniProtKB-ACP0A877http://www.uniprot.org/uniprot/P0A877
UniProtKBTRPA_ECOLIhttp://www.uniprot.org/uniprot/TRPA_ECOLI
chargeswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:TRPA_ECOLI
eggNOGCOG0159http://eggnogapi.embl.de/nog_data/html/tree/COG0159
eggNOGENOG4105F6Hhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105F6H
epestfindswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:TRPA_ECOLI
garnierswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:TRPA_ECOLI
helixturnhelixswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:TRPA_ECOLI
hmomentswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:TRPA_ECOLI
iepswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:TRPA_ECOLI
inforesidueswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:TRPA_ECOLI
octanolswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:TRPA_ECOLI
pepcoilswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:TRPA_ECOLI
pepdigestswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:TRPA_ECOLI
pepinfoswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:TRPA_ECOLI
pepnetswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:TRPA_ECOLI
pepstatsswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:TRPA_ECOLI
pepwheelswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:TRPA_ECOLI
pepwindowswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:TRPA_ECOLI
sigcleaveswissprot:TRPA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:TRPA_ECOLI
DataBaseIDURL or Descriptions
# AltNameTUSE_ECOLItRNA 2-thiouridine synthesizing protein E
# BioGrid426004210
# EcoGeneEG12876tusE
# FUNCTIONTUSE_ECOLIPart of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Could accept sulfur from TusD. {ECO 0000269|PubMed 16387657}.
# GO_componentGO:0005737cytoplasm; IEA:UniProtKB-SubCell.
# GO_functionGO:0016740transferase activity; IEA:UniProtKB-KW.
# GO_functionGO:0097163sulfur carrier activity; IDA:EcoCyc.
# GO_processGO:0002143tRNA wobble position uridine thiolation; IMP:EcoCyc.
# GOslim_componentGO:0005737cytoplasm
# GOslim_functionGO:0003674molecular_function
# GOslim_processGO:0006399tRNA metabolic process
# IntActP0AB1811
# InterProIPR007453DsrC/TusE
# InterProIPR025526DsrC-like_dom
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Briteko03016 Transfer RNA biogenesis
# KEGG_Pathwayko04122Sulfur relay system
# OrganismTUSE_ECOLIEscherichia coli (strain K12)
# PATRIC32117159VBIEscCol129921_1004
# PIRH64837H64837
# PIRSFPIRSF006223DsrC_TusE
# PfamPF04358DsrC
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameTUSE_ECOLISulfurtransferase TusE
# RefSeqNP_415489NC_000913.3
# RefSeqWP_000904442NZ_LN832404.1
# SEQUENCE CAUTIONSequence=X00547; Type=Frameshift; Positions=24; Evidence={ECO0000305};
# SIMILARITYBelongs to the DsrC/TusE family. {ECO0000305}.
# SUBCELLULAR LOCATIONTUSE_ECOLICytoplasm {ECO 0000305}.
# SUBUNITInteracts with the TusBCD complex. Interacts with MnmA. {ECO:0000269|PubMed16387657}.
# SUPFAMSSF69721SSF69721
# TIGRFAMsTIGR03342dsrC_tusE_dsvC
# eggNOGCOG2920LUCA
# eggNOGENOG4108Z0TBacteria
BLASTswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:TUSE_ECOLI
BioCycECOL316407:JW0952-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0952-MONOMER
BioCycEcoCyc:EG12876-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG12876-MONOMER
BioCycMetaCyc:EG12876-MONOMERhttp://biocyc.org/getid?id=MetaCyc:EG12876-MONOMER
COGCOG2920http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2920
DIPDIP-48154Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-48154N
DOI10.1016/j.molcel.2005.11.001http://dx.doi.org/10.1016/j.molcel.2005.11.001
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1093/nar/23.17.3554http://dx.doi.org/10.1093/nar/23.17.3554
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:2.8.1.-http://www.genome.jp/dbget-bin/www_bget?EC:2.8.1.-
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX00547http://www.ebi.ac.uk/ena/data/view/X00547
ENZYME2.8.1.-http://enzyme.expasy.org/EC/2.8.1.-
EchoBASEEB2714http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2714
EcoGeneEG12876http://www.ecogene.org/geneInfo.php?eg_id=EG12876
EnsemblBacteriaAAC74055http://www.ensemblgenomes.org/id/AAC74055
EnsemblBacteriaAAC74055http://www.ensemblgenomes.org/id/AAC74055
EnsemblBacteriaBAA35734http://www.ensemblgenomes.org/id/BAA35734
EnsemblBacteriaBAA35734http://www.ensemblgenomes.org/id/BAA35734
EnsemblBacteriaBAA35734http://www.ensemblgenomes.org/id/BAA35734
EnsemblBacteriab0969http://www.ensemblgenomes.org/id/b0969
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GO_functionGO:0016740http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016740
GO_functionGO:0097163http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0097163
GO_processGO:0002143http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0002143
GOslim_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_processGO:0006399http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006399
GeneID945023http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945023
HOGENOMHOG000279490http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000279490&db=HOGENOM6
InParanoidP0AB18http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AB18
IntActP0AB18http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AB18*
IntEnz2.8.1http://www.ebi.ac.uk/intenz/query?cmd=Search&q=2.8.1
InterProIPR007453http://www.ebi.ac.uk/interpro/entry/IPR007453
InterProIPR025526http://www.ebi.ac.uk/interpro/entry/IPR025526
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Briteko03016http://www.genome.jp/dbget-bin/www_bget?ko03016
KEGG_Geneecj:JW0952http://www.genome.jp/dbget-bin/www_bget?ecj:JW0952
KEGG_Geneeco:b0969http://www.genome.jp/dbget-bin/www_bget?eco:b0969
KEGG_OrthologyKO:K11179http://www.genome.jp/dbget-bin/www_bget?KO:K11179
KEGG_Pathwayko04122http://www.genome.jp/kegg-bin/show_pathway?ko04122
OMAEYNTSPAhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=EYNTSPA
PSORT-Bswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:TUSE_ECOLI
PSORT2swissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:TUSE_ECOLI
PSORTswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:TUSE_ECOLI
PfamPF04358http://pfam.xfam.org/family/PF04358
Phobiusswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:TUSE_ECOLI
PhylomeDBP0AB18http://phylomedb.org/?seqid=P0AB18
ProteinModelPortalP0AB18http://www.proteinmodelportal.org/query/uniprot/P0AB18
PubMed16387657http://www.ncbi.nlm.nih.gov/pubmed/16387657
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed6376117http://www.ncbi.nlm.nih.gov/pubmed/6376117
PubMed7567469http://www.ncbi.nlm.nih.gov/pubmed/7567469
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415489http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415489
RefSeqWP_000904442http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000904442
SMRP0AB18http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0AB18
STRING511145.b0969http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0969&targetmode=cogs
STRINGCOG2920http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG2920&targetmode=cogs
SUPFAMSSF69721http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF69721
TIGRFAMsTIGR03342http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR03342
UniProtKB-ACP0AB18http://www.uniprot.org/uniprot/P0AB18
UniProtKBTUSE_ECOLIhttp://www.uniprot.org/uniprot/TUSE_ECOLI
chargeswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:TUSE_ECOLI
eggNOGCOG2920http://eggnogapi.embl.de/nog_data/html/tree/COG2920
eggNOGENOG4108Z0Thttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4108Z0T
epestfindswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:TUSE_ECOLI
garnierswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:TUSE_ECOLI
helixturnhelixswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:TUSE_ECOLI
hmomentswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:TUSE_ECOLI
iepswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:TUSE_ECOLI
inforesidueswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:TUSE_ECOLI
octanolswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:TUSE_ECOLI
pepcoilswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:TUSE_ECOLI
pepdigestswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:TUSE_ECOLI
pepinfoswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:TUSE_ECOLI
pepnetswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:TUSE_ECOLI
pepstatsswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:TUSE_ECOLI
pepwheelswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:TUSE_ECOLI
pepwindowswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:TUSE_ECOLI
sigcleaveswissprot:TUSE_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:TUSE_ECOLI
DataBaseIDURL or Descriptions
# BioGrid42634388
# DOMAINTRKA_ECOLIThe RCK N-terminal domain binds NAD and possibly other effectors. This is expected to cause a conformation change that regulates potassium transport (By similarity). {ECO 0000250}.
# EcoGeneEG11019trkA
# FUNCTIONTRKA_ECOLIPart of the constitutive potassium transport systems TrkG and TrkH. May regulate the transport activity of TrkG and TrkH systems. Binds to NAD(+) and NADH. {ECO 0000269|PubMed 2674131, ECO 0000269|PubMed 8412700}.
# GO_componentGO:0005886plasma membrane; IEA:UniProtKB-SubCell.
# GO_componentGO:0016020membrane; IDA:EcoCyc.
# GO_functionGO:0004497monooxygenase activity; IBA:GO_Central.
# GO_functionGO:0008324cation transmembrane transporter activity; IDA:EcoCyc.
# GO_functionGO:0015079potassium ion transmembrane transporter activity; IEA:InterPro.
# GO_processGO:0006813potassium ion transport; IDA:EcoCyc.
# GO_processGO:0044550secondary metabolite biosynthetic process; IBA:GO_Central.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0016491oxidoreductase activity
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0019748secondary metabolic process
# Gene3D3.40.50.720-; 2.
# IntActP0AGI84
# InterProIPR003148RCK_N
# InterProIPR006036K_uptake_TrkA
# InterProIPR006037RCK_C
# InterProIPR016040NAD(P)-bd_dom
# OrganismTRKA_ECOLIEscherichia coli (strain K12)
# PATRIC32122012VBIEscCol129921_3383
# PIRS36252S36252
# PRINTSPR00335KUPTAKETRKA
# PROSITEPS51201RCK_N; 2
# PROSITEPS51202RCK_C; 2
# PfamPF02080TrkA_C; 2
# PfamPF02254TrkA_N; 2
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameTRKA_ECOLITrk system potassium uptake protein TrkA
# RefSeqNP_417748NC_000913.3
# RefSeqWP_000691382NZ_LN832404.1
# SIMILARITYContains 2 RCK C-terminal domains. {ECO:0000255|PROSITE-ProRulePRU00544}.
# SIMILARITYContains 2 RCK N-terminal domains. {ECO:0000255|PROSITE-ProRulePRU00543}.
# SUBCELLULAR LOCATIONTRKA_ECOLICell inner membrane {ECO 0000269|PubMed 2674131}; Peripheral membrane protein {ECO 0000269|PubMed 2674131}; Cytoplasmic side {ECO 0000269|PubMed 2674131}. Note=Peripherally bound to the inner side of the inner membrane via the TrkG and TrkH proteins.
# SUPFAMSSF116726SSF116726; 2
# SUPFAMSSF51735SSF51735; 2
# TCDB2.A.38.1the k(+) transporter (trk) family
# eggNOGCOG0569LUCA
# eggNOGENOG4105C1ABacteria
BLASTswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:TRKA_ECOLI
BioCycECOL316407:JW3251-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3251-MONOMER
BioCycEcoCyc:TRKA-MONOMERhttp://biocyc.org/getid?id=EcoCyc:TRKA-MONOMER
COGCOG0569http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0569
DIPDIP-35971Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-35971N
DOI10.1006/jmbi.1996.0835http://dx.doi.org/10.1006/jmbi.1996.0835
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1111/j.1365-2958.1993.tb01714.xhttp://dx.doi.org/10.1111/j.1365-2958.1993.tb01714.x
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU18997http://www.ebi.ac.uk/ena/data/view/U18997
EMBLX52114http://www.ebi.ac.uk/ena/data/view/X52114
EMBLX77091http://www.ebi.ac.uk/ena/data/view/X77091
EMBLY10307http://www.ebi.ac.uk/ena/data/view/Y10307
EchoBASEEB1012http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1012
EcoGeneEG11019http://www.ecogene.org/geneInfo.php?eg_id=EG11019
EnsemblBacteriaAAC76315http://www.ensemblgenomes.org/id/AAC76315
EnsemblBacteriaAAC76315http://www.ensemblgenomes.org/id/AAC76315
EnsemblBacteriaBAE78002http://www.ensemblgenomes.org/id/BAE78002
EnsemblBacteriaBAE78002http://www.ensemblgenomes.org/id/BAE78002
EnsemblBacteriaBAE78002http://www.ensemblgenomes.org/id/BAE78002
EnsemblBacteriab3290http://www.ensemblgenomes.org/id/b3290
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016020http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016020
GO_functionGO:0004497http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004497
GO_functionGO:0008324http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008324
GO_functionGO:0015079http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015079
GO_processGO:0006813http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006813
GO_processGO:0044550http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044550
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0019748http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0019748
Gene3D3.40.50.720http://www.cathdb.info/version/latest/superfamily/3.40.50.720
GeneID947788http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947788
HOGENOMHOG000227130http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000227130&db=HOGENOM6
InParanoidP0AGI8http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AGI8
IntActP0AGI8http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AGI8*
InterProIPR003148http://www.ebi.ac.uk/interpro/entry/IPR003148
InterProIPR006036http://www.ebi.ac.uk/interpro/entry/IPR006036
InterProIPR006037http://www.ebi.ac.uk/interpro/entry/IPR006037
InterProIPR016040http://www.ebi.ac.uk/interpro/entry/IPR016040
KEGG_Geneecj:JW3251http://www.genome.jp/dbget-bin/www_bget?ecj:JW3251
KEGG_Geneeco:b3290http://www.genome.jp/dbget-bin/www_bget?eco:b3290
KEGG_OrthologyKO:K03499http://www.genome.jp/dbget-bin/www_bget?KO:K03499
OMAIACQVAYhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=IACQVAY
PRINTSPR00335http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00335
PROSITEPS51201http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51201
PROSITEPS51202http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51202
PSORT-Bswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:TRKA_ECOLI
PSORT2swissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:TRKA_ECOLI
PSORTswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:TRKA_ECOLI
PfamPF02080http://pfam.xfam.org/family/PF02080
PfamPF02254http://pfam.xfam.org/family/PF02254
Phobiusswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:TRKA_ECOLI
PhylomeDBP0AGI8http://phylomedb.org/?seqid=P0AGI8
ProteinModelPortalP0AGI8http://www.proteinmodelportal.org/query/uniprot/P0AGI8
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2674131http://www.ncbi.nlm.nih.gov/pubmed/2674131
PubMed7961514http://www.ncbi.nlm.nih.gov/pubmed/7961514
PubMed8412700http://www.ncbi.nlm.nih.gov/pubmed/8412700
PubMed9086272http://www.ncbi.nlm.nih.gov/pubmed/9086272
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_417748http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417748
RefSeqWP_000691382http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000691382
SMRP0AGI8http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0AGI8
STRING511145.b3290http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3290&targetmode=cogs
STRINGCOG0569http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0569&targetmode=cogs
SUPFAMSSF116726http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF116726
SUPFAMSSF51735http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF51735
TCDB2.A.38.1http://www.tcdb.org/search/result.php?tc=2.A.38.1
UniProtKB-ACP0AGI8http://www.uniprot.org/uniprot/P0AGI8
UniProtKBTRKA_ECOLIhttp://www.uniprot.org/uniprot/TRKA_ECOLI
chargeswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:TRKA_ECOLI
eggNOGCOG0569http://eggnogapi.embl.de/nog_data/html/tree/COG0569
eggNOGENOG4105C1Ahttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105C1A
epestfindswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:TRKA_ECOLI
garnierswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:TRKA_ECOLI
helixturnhelixswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:TRKA_ECOLI
hmomentswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:TRKA_ECOLI
iepswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:TRKA_ECOLI
inforesidueswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:TRKA_ECOLI
octanolswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:TRKA_ECOLI
pepcoilswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:TRKA_ECOLI
pepdigestswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:TRKA_ECOLI
pepinfoswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:TRKA_ECOLI
pepnetswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:TRKA_ECOLI
pepstatsswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:TRKA_ECOLI
pepwheelswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:TRKA_ECOLI
pepwindowswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:TRKA_ECOLI
sigcleaveswissprot:TRKA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:TRKA_ECOLI
DataBaseIDURL or Descriptions
# AltNameIDNO_ECOLI5-keto-D-gluconate 5-reductase
# BioGrid42627306
# CATALYTIC ACTIVITYIDNO_ECOLID-gluconate + NAD(P)(+) = 5-dehydro-D- gluconate + NAD(P)H.
# EcoGeneEG12540idnO
# FUNCTIONIDNO_ECOLICatalyzes a reversible reduction of 5-ketoglutanate to form D-gluconate. Dependent on NADP, almost inactive with NAD. {ECO 0000269|PubMed 9658018}.
# GO_componentGO:0005737cytoplasm; IEA:UniProtKB-SubCell.
# GO_functionGO:0008874gluconate 5-dehydrogenase activity; IDA:EcoCyc.
# GO_processGO:0019521D-gluconate metabolic process; IEA:UniProtKB-KW.
# GO_processGO:0046183L-idonate catabolic process; IEP:EcoCyc.
# GOslim_componentGO:0005737cytoplasm
# GOslim_functionGO:0016491oxidoreductase activity
# GOslim_processGO:0005975carbohydrate metabolic process
# GOslim_processGO:0009056catabolic process
# GOslim_processGO:0044281small molecule metabolic process
# Gene3D3.40.50.720-; 1.
# IntActP0A9P97
# InterProIPR002347SDR_fam
# InterProIPR016040NAD(P)-bd_dom
# InterProIPR020904Sc_DH/Rdtase_CS
# KEGG_Briteko01000Enzymes
# OrganismIDNO_ECOLIEscherichia coli (strain K12)
# PANTHERPTHR24322PTHR24322; 2
# PATHWAYIDNO_ECOLICarbohydrate acid metabolism; L-idonate degradation.
# PATRIC32124105VBIEscCol129921_4397
# PIRS56492S56492
# PRINTSPR00080SDRFAMILY
# PRINTSPR00081GDHRDH
# PROSITEPS00061ADH_SHORT
# PfamPF00106adh_short
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameIDNO_ECOLIGluconate 5-dehydrogenase
# RefSeqNP_418687NC_000913.3
# RefSeqWP_000998695NZ_LN832404.1
# SIMILARITYBelongs to the short-chain dehydrogenases/reductases (SDR) family. {ECO0000305}.
# SUBCELLULAR LOCATIONIDNO_ECOLICytoplasm {ECO 0000305}.
# SUPFAMSSF51735SSF51735
# eggNOGENOG4105CHRBacteria
# eggNOGENOG410XNW1LUCA
BLASTswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:IDNO_ECOLI
BioCycECOL316407:JW4223-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW4223-MONOMER
BioCycEcoCyc:GLUCONREDUCT-MONOMERhttp://biocyc.org/getid?id=EcoCyc:GLUCONREDUCT-MONOMER
BioCycMetaCyc:GLUCONREDUCT-MONOMERhttp://biocyc.org/getid?id=MetaCyc:GLUCONREDUCT-MONOMER
COGCOG1028http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1028
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/23.12.2105http://dx.doi.org/10.1093/nar/23.12.2105
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:1.1.1.69http://www.genome.jp/dbget-bin/www_bget?EC:1.1.1.69
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU14003http://www.ebi.ac.uk/ena/data/view/U14003
ENZYME1.1.1.69http://enzyme.expasy.org/EC/1.1.1.69
EchoBASEEB2429http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2429
EcoGeneEG12540http://www.ecogene.org/geneInfo.php?eg_id=EG12540
EnsemblBacteriaAAC77223http://www.ensemblgenomes.org/id/AAC77223
EnsemblBacteriaAAC77223http://www.ensemblgenomes.org/id/AAC77223
EnsemblBacteriaBAE78263http://www.ensemblgenomes.org/id/BAE78263
EnsemblBacteriaBAE78263http://www.ensemblgenomes.org/id/BAE78263
EnsemblBacteriaBAE78263http://www.ensemblgenomes.org/id/BAE78263
EnsemblBacteriab4266http://www.ensemblgenomes.org/id/b4266
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GO_functionGO:0008874http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008874
GO_processGO:0019521http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0019521
GO_processGO:0046183http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046183
GOslim_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GOslim_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GOslim_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GOslim_processGO:0009056http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009056
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
Gene3D3.40.50.720http://www.cathdb.info/version/latest/superfamily/3.40.50.720
GeneID947109http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947109
InParanoidP0A9P9http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0A9P9
IntActP0A9P9http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0A9P9*
IntEnz1.1.1.69http://www.ebi.ac.uk/intenz/query?cmd=Search&q=1.1.1.69
InterProIPR002347http://www.ebi.ac.uk/interpro/entry/IPR002347
InterProIPR016040http://www.ebi.ac.uk/interpro/entry/IPR016040
InterProIPR020904http://www.ebi.ac.uk/interpro/entry/IPR020904
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW4223http://www.genome.jp/dbget-bin/www_bget?ecj:JW4223
KEGG_Geneeco:b4266http://www.genome.jp/dbget-bin/www_bget?eco:b4266
KEGG_OrthologyKO:K00046http://www.genome.jp/dbget-bin/www_bget?KO:K00046
MINTMINT-1231433http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1231433
OMAAFHELDVhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=AFHELDV
PANTHERPTHR24322http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24322
PRINTSPR00080http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00080
PRINTSPR00081http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00081
PROSITEPS00061http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00061
PSORT-Bswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:IDNO_ECOLI
PSORT2swissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:IDNO_ECOLI
PSORTswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:IDNO_ECOLI
PfamPF00106http://pfam.xfam.org/family/PF00106
Phobiusswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:IDNO_ECOLI
PhylomeDBP0A9P9http://phylomedb.org/?seqid=P0A9P9
ProteinModelPortalP0A9P9http://www.proteinmodelportal.org/query/uniprot/P0A9P9
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed7610040http://www.ncbi.nlm.nih.gov/pubmed/7610040
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9658018http://www.ncbi.nlm.nih.gov/pubmed/9658018
RefSeqNP_418687http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_418687
RefSeqWP_000998695http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000998695
SMRP0A9P9http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0A9P9
STRING511145.b4266http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b4266&targetmode=cogs
STRINGCOG1028http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1028&targetmode=cogs
SUPFAMSSF51735http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF51735
UniProtKB-ACP0A9P9http://www.uniprot.org/uniprot/P0A9P9
UniProtKBIDNO_ECOLIhttp://www.uniprot.org/uniprot/IDNO_ECOLI
chargeswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:IDNO_ECOLI
eggNOGENOG4105CHRhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105CHR
eggNOGENOG410XNW1http://eggnogapi.embl.de/nog_data/html/tree/ENOG410XNW1
epestfindswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:IDNO_ECOLI
garnierswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:IDNO_ECOLI
helixturnhelixswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:IDNO_ECOLI
hmomentswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:IDNO_ECOLI
iepswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:IDNO_ECOLI
inforesidueswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:IDNO_ECOLI
octanolswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:IDNO_ECOLI
pepcoilswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:IDNO_ECOLI
pepdigestswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:IDNO_ECOLI
pepinfoswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:IDNO_ECOLI
pepnetswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:IDNO_ECOLI
pepstatsswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:IDNO_ECOLI
pepwheelswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:IDNO_ECOLI
pepwindowswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:IDNO_ECOLI
sigcleaveswissprot:IDNO_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:IDNO_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426231016
# EcoGeneEG11157ygeA
# GO_functionGO:0047661amino-acid racemase activity; IBA:GO_Central.
# GO_processGO:0006520cellular amino acid metabolic process; IEA:InterPro.
# GO_processGO:0009252peptidoglycan biosynthetic process; IBA:GO_Central.
# GOslim_functionGO:0016853isomerase activity
# GOslim_processGO:0006520cellular amino acid metabolic process
# GOslim_processGO:0009058biosynthetic process
# Gene3D3.40.50.1860-; 2.
# IntActP038132
# InterProIPR001920Asp/Glu_race
# InterProIPR004380Asp_race
# InterProIPR015942Asp/Glu/hydantoin_racemase
# InterProIPR018187Asp/Glu_racemase_AS_1
# InterProIPR033134Asp/Glu_racemase_AS_2
# OrganismYGEA_ECOLIEscherichia coli (strain K12)
# PATRIC32121098VBIEscCol129921_2938
# PIRA04438QQECK
# PROSITEPS00923ASP_GLU_RACEMASE_1
# PROSITEPS00924ASP_GLU_RACEMASE_2
# PfamPF01177Asp_Glu_race
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYGEA_ECOLIUncharacterized protein YgeA
# RefSeqNP_417317NC_000913.3
# RefSeqWP_000848659NZ_LN832404.1
# SIMILARITYBelongs to the aspartate/glutamate racemases family. {ECO0000305}.
# SUPFAMSSF53681SSF53681; 2
# TIGRFAMsTIGR00035asp_race
# eggNOGCOG1794LUCA
# eggNOGENOG4105CG9Bacteria
BLASTswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YGEA_ECOLI
BioCycECOL316407:JW2808-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2808-MONOMER
BioCycEcoCyc:EG11157-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11157-MONOMER
DIPDIP-12147Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-12147N
DOI10.1016/S0022-2836(83)80022-9http://dx.doi.org/10.1016/S0022-2836(83)80022-9
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLJ01614http://www.ebi.ac.uk/ena/data/view/J01614
EMBLJ03732http://www.ebi.ac.uk/ena/data/view/J03732
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU29581http://www.ebi.ac.uk/ena/data/view/U29581
EchoBASEEB1146http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1146
EcoGeneEG11157http://www.ecogene.org/geneInfo.php?eg_id=EG11157
EnsemblBacteriaAAC75879http://www.ensemblgenomes.org/id/AAC75879
EnsemblBacteriaAAC75879http://www.ensemblgenomes.org/id/AAC75879
EnsemblBacteriaBAE76909http://www.ensemblgenomes.org/id/BAE76909
EnsemblBacteriaBAE76909http://www.ensemblgenomes.org/id/BAE76909
EnsemblBacteriaBAE76909http://www.ensemblgenomes.org/id/BAE76909
EnsemblBacteriab2840http://www.ensemblgenomes.org/id/b2840
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_functionGO:0047661http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0047661
GO_processGO:0006520http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006520
GO_processGO:0009252http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009252
GOslim_functionGO:0016853http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016853
GOslim_processGO:0006520http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006520
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
Gene3D3.40.50.1860http://www.cathdb.info/version/latest/superfamily/3.40.50.1860
GeneID947348http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947348
HOGENOMHOG000262146http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000262146&db=HOGENOM6
InParanoidP03813http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P03813
IntActP03813http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P03813*
InterProIPR001920http://www.ebi.ac.uk/interpro/entry/IPR001920
InterProIPR004380http://www.ebi.ac.uk/interpro/entry/IPR004380
InterProIPR015942http://www.ebi.ac.uk/interpro/entry/IPR015942
InterProIPR018187http://www.ebi.ac.uk/interpro/entry/IPR018187
InterProIPR033134http://www.ebi.ac.uk/interpro/entry/IPR033134
KEGG_Geneecj:JW2808http://www.genome.jp/dbget-bin/www_bget?ecj:JW2808
KEGG_Geneeco:b2840http://www.genome.jp/dbget-bin/www_bget?eco:b2840
OMAVICTNTMhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=VICTNTM
PROSITEPS00923http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00923
PROSITEPS00924http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00924
PSORT-Bswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YGEA_ECOLI
PSORT2swissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YGEA_ECOLI
PSORTswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YGEA_ECOLI
PfamPF01177http://pfam.xfam.org/family/PF01177
Phobiusswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YGEA_ECOLI
PhylomeDBP03813http://phylomedb.org/?seqid=P03813
ProteinModelPortalP03813http://www.proteinmodelportal.org/query/uniprot/P03813
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2836407http://www.ncbi.nlm.nih.gov/pubmed/2836407
PubMed6350602http://www.ncbi.nlm.nih.gov/pubmed/6350602
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_417317http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417317
RefSeqWP_000848659http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000848659
SMRP03813http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P03813
STRING511145.b2840http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b2840&targetmode=cogs
SUPFAMSSF53681http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF53681
TIGRFAMsTIGR00035http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00035
UniProtKB-ACP03813http://www.uniprot.org/uniprot/P03813
UniProtKBYGEA_ECOLIhttp://www.uniprot.org/uniprot/YGEA_ECOLI
chargeswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YGEA_ECOLI
eggNOGCOG1794http://eggnogapi.embl.de/nog_data/html/tree/COG1794
eggNOGENOG4105CG9http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105CG9
epestfindswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YGEA_ECOLI
garnierswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YGEA_ECOLI
helixturnhelixswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YGEA_ECOLI
hmomentswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YGEA_ECOLI
iepswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YGEA_ECOLI
inforesidueswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YGEA_ECOLI
octanolswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YGEA_ECOLI
pepcoilswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YGEA_ECOLI
pepdigestswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YGEA_ECOLI
pepinfoswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YGEA_ECOLI
pepnetswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YGEA_ECOLI
pepstatsswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YGEA_ECOLI
pepwheelswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YGEA_ECOLI
pepwindowswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YGEA_ECOLI
sigcleaveswissprot:YGEA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YGEA_ECOLI
DataBaseIDURL or Descriptions
# BRENDA2.7.132026
# BioGrid426055911
# CATALYTIC ACTIVITYEVGS_ECOLIATP + protein L-histidine = ADP + protein N- phospho-L-histidine.
# EcoGeneEG11610evgS
# FUNCTIONEVGS_ECOLIMember of the two-component regulatory system EvgS/EvgA. Phosphorylates EvgA via a four-step phosphorelay in response to environmental signals.
# GO_componentGO:0005622intracellular; IEA:GOC.
# GO_componentGO:0005886plasma membrane; IEA:UniProtKB-SubCell.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0000155phosphorelay sensor kinase activity; IDA:EcoCyc.
# GO_functionGO:0005524ATP binding; IEA:UniProtKB-KW.
# GO_functionGO:0009927histidine phosphotransfer kinase activity; IMP:EcoCyc.
# GO_processGO:0000160phosphorelay signal transduction system; IDA:EcoCyc.
# GO_processGO:0010447response to acidic pH; IMP:EcoCyc.
# GO_processGO:0046777protein autophosphorylation; IDA:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005622intracellular
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0004871signal transducer activity
# GOslim_functionGO:0016301kinase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006464cellular protein modification process
# GOslim_processGO:0007165signal transduction
# GOslim_processGO:0008150biological_process
# Gene3D1.10.287.130-; 1.
# Gene3D1.20.120.160-; 1.
# Gene3D3.30.565.10-; 1.
# IntActP308553
# InterProIPR001638Solute-binding_3/MltF_N
# InterProIPR001789Sig_transdc_resp-reg_receiver
# InterProIPR003594HATPase_C
# InterProIPR003661HisK_dim/P
# InterProIPR004358Sig_transdc_His_kin-like_C
# InterProIPR005467His_kinase_dom
# InterProIPR008207Sig_transdc_His_kin_Hpt_dom
# InterProIPR011006CheY-like_superfamily
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko01000 Enzymes
# KEGG_Briteko01001 Protein kinases
# KEGG_Briteko02022 M00477 EvgS-EvgA (acid and drug tolerance) two-component regulatory system
# KEGG_Briteko02022 Two-component system
# KEGG_Pathwayko02020Two-component system
# KEGG_Pathwayko05133Pertussis
# OrganismEVGS_ECOLIEscherichia coli (strain K12)
# PATRIC32120119VBIEscCol129921_2468
# PIRG65010G65010
# PRINTSPR00344BCTRLSENSOR
# PROSITEPS50109HIS_KIN
# PROSITEPS50110RESPONSE_REGULATORY
# PROSITEPS50894HPT
# PTMEVGS_ECOLIActivation requires a sequential transfer of a phosphate group from a His in the primary transmitter domain, to an Asp in the receiver domain and to a His in the secondary transmitter domain.
# PfamPF00072Response_reg
# PfamPF00497SBP_bac_3; 2
# PfamPF00512HisKA
# PfamPF01627Hpt
# PfamPF02518HATPase_c
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameEVGS_ECOLISensor protein EvgS
# RefSeqNP_416871NC_000913.3
# SIMILARITYContains 1 HPt domain. {ECO:0000255|PROSITE- ProRulePRU00110}.
# SIMILARITYContains 1 histidine kinase domain. {ECO:0000255|PROSITE-ProRulePRU00107}.
# SIMILARITYContains 1 response regulatory domain. {ECO:0000255|PROSITE-ProRulePRU00169}.
# SMARTSM00062PBPb; 2
# SMARTSM00073HPT
# SMARTSM00387HATPase_c
# SMARTSM00388HisKA
# SMARTSM00448REC
# SUBCELLULAR LOCATIONEVGS_ECOLICell inner membrane {ECO 0000305}; Multi- pass membrane protein {ECO 0000305}.
# SUPFAMSSF47226SSF47226
# SUPFAMSSF47384SSF47384
# SUPFAMSSF52172SSF52172
# SUPFAMSSF55874SSF55874
# eggNOGCOG0784LUCA
# eggNOGCOG0834LUCA
# eggNOGCOG2198LUCA
# eggNOGENOG4105BZUBacteria
BLASTswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:EVGS_ECOLI
BioCycECOL316407:JW2367-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2367-MONOMER
BioCycEcoCyc:EVGS-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EVGS-MONOMER
DIPDIP-9545Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9545N
DOI10.1016/0378-1119(94)90733-1http://dx.doi.org/10.1016/0378-1119(94)90733-1
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1046/j.1365-2958.1998.00716.xhttp://dx.doi.org/10.1046/j.1365-2958.1998.00716.x
DOI10.1093/dnares/4.2.91http://dx.doi.org/10.1093/dnares/4.2.91
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1271/bbb.64.1203http://dx.doi.org/10.1271/bbb.64.1203
EC_numberEC:2.7.13.3http://www.genome.jp/dbget-bin/www_bget?EC:2.7.13.3
EMBLAF201840http://www.ebi.ac.uk/ena/data/view/AF201840
EMBLAF201841http://www.ebi.ac.uk/ena/data/view/AF201841
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLD14008http://www.ebi.ac.uk/ena/data/view/D14008
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
ENZYME2.7.13.3http://enzyme.expasy.org/EC/2.7.13.3
EchoBASEEB1567http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1567
EcoGeneEG11610http://www.ecogene.org/geneInfo.php?eg_id=EG11610
EnsemblBacteriaAAC75429http://www.ensemblgenomes.org/id/AAC75429
EnsemblBacteriaAAC75429http://www.ensemblgenomes.org/id/AAC75429
EnsemblBacteriaBAA16241http://www.ensemblgenomes.org/id/BAA16241
EnsemblBacteriaBAA16241http://www.ensemblgenomes.org/id/BAA16241
EnsemblBacteriaBAA16241http://www.ensemblgenomes.org/id/BAA16241
EnsemblBacteriab2370http://www.ensemblgenomes.org/id/b2370
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005622http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005622
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0000155http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0000155
GO_functionGO:0005524http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005524
GO_functionGO:0009927http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009927
GO_processGO:0000160http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0000160
GO_processGO:0010447http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0010447
GO_processGO:0046777http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046777
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005622http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005622
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0004871http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004871
GOslim_functionGO:0016301http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016301
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006464http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006464
GOslim_processGO:0007165http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0007165
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
Gene3D1.10.287.130http://www.cathdb.info/version/latest/superfamily/1.10.287.130
Gene3D1.20.120.160http://www.cathdb.info/version/latest/superfamily/1.20.120.160
Gene3D3.30.565.10http://www.cathdb.info/version/latest/superfamily/3.30.565.10
GeneID946844http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946844
HOGENOMHOG000122879http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000122879&db=HOGENOM6
InParanoidP30855http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P30855
IntActP30855http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P30855*
IntEnz2.7.13.3http://www.ebi.ac.uk/intenz/query?cmd=Search&q=2.7.13.3
InterProIPR001638http://www.ebi.ac.uk/interpro/entry/IPR001638
InterProIPR001789http://www.ebi.ac.uk/interpro/entry/IPR001789
InterProIPR003594http://www.ebi.ac.uk/interpro/entry/IPR003594
InterProIPR003661http://www.ebi.ac.uk/interpro/entry/IPR003661
InterProIPR004358http://www.ebi.ac.uk/interpro/entry/IPR004358
InterProIPR005467http://www.ebi.ac.uk/interpro/entry/IPR005467
InterProIPR008207http://www.ebi.ac.uk/interpro/entry/IPR008207
InterProIPR011006http://www.ebi.ac.uk/interpro/entry/IPR011006
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Briteko01001http://www.genome.jp/dbget-bin/www_bget?ko01001
KEGG_Briteko02022http://www.genome.jp/dbget-bin/www_bget?ko02022
KEGG_Briteko02022http://www.genome.jp/dbget-bin/www_bget?ko02022
KEGG_Geneecj:JW2367http://www.genome.jp/dbget-bin/www_bget?ecj:JW2367
KEGG_Geneeco:b2370http://www.genome.jp/dbget-bin/www_bget?eco:b2370
KEGG_OrthologyKO:K07679http://www.genome.jp/dbget-bin/www_bget?KO:K07679
KEGG_Pathwayko02020http://www.genome.jp/kegg-bin/show_pathway?ko02020
KEGG_Pathwayko05133http://www.genome.jp/kegg-bin/show_pathway?ko05133
MINTMINT-1288120http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1288120
OMADHAVYIChttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=DHAVYIC
PRINTSPR00344http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00344
PROSITEPS50109http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50109
PROSITEPS50110http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50110
PROSITEPS50894http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50894
PSORT-Bswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:EVGS_ECOLI
PSORT2swissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:EVGS_ECOLI
PSORTswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:EVGS_ECOLI
PfamPF00072http://pfam.xfam.org/family/PF00072
PfamPF00497http://pfam.xfam.org/family/PF00497
PfamPF00512http://pfam.xfam.org/family/PF00512
PfamPF01627http://pfam.xfam.org/family/PF01627
PfamPF02518http://pfam.xfam.org/family/PF02518
Phobiusswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:EVGS_ECOLI
PhylomeDBP30855http://phylomedb.org/?seqid=P30855
ProteinModelPortalP30855http://www.proteinmodelportal.org/query/uniprot/P30855
PubMed10923791http://www.ncbi.nlm.nih.gov/pubmed/10923791
PubMed1289796http://www.ncbi.nlm.nih.gov/pubmed/1289796
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8125343http://www.ncbi.nlm.nih.gov/pubmed/8125343
PubMed9205837http://www.ncbi.nlm.nih.gov/pubmed/9205837
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9535079http://www.ncbi.nlm.nih.gov/pubmed/9535079
RefSeqNP_416871http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416871
SMARTSM00062http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00062
SMARTSM00073http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00073
SMARTSM00387http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00387
SMARTSM00388http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00388
SMARTSM00448http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00448
SMRP30855http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P30855
STRING511145.b2370http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b2370&targetmode=cogs
SUPFAMSSF47226http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF47226
SUPFAMSSF47384http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF47384
SUPFAMSSF52172http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF52172
SUPFAMSSF55874http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF55874
UniProtKB-ACP30855http://www.uniprot.org/uniprot/P30855
UniProtKBEVGS_ECOLIhttp://www.uniprot.org/uniprot/EVGS_ECOLI
chargeswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:EVGS_ECOLI
eggNOGCOG0784http://eggnogapi.embl.de/nog_data/html/tree/COG0784
eggNOGCOG0834http://eggnogapi.embl.de/nog_data/html/tree/COG0834
eggNOGCOG2198http://eggnogapi.embl.de/nog_data/html/tree/COG2198
eggNOGENOG4105BZUhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105BZU
epestfindswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:EVGS_ECOLI
garnierswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:EVGS_ECOLI
helixturnhelixswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:EVGS_ECOLI
hmomentswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:EVGS_ECOLI
iepswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:EVGS_ECOLI
inforesidueswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:EVGS_ECOLI
octanolswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:EVGS_ECOLI
pepcoilswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:EVGS_ECOLI
pepdigestswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:EVGS_ECOLI
pepinfoswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:EVGS_ECOLI
pepnetswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:EVGS_ECOLI
pepstatsswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:EVGS_ECOLI
pepwheelswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:EVGS_ECOLI
pepwindowswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:EVGS_ECOLI
sigcleaveswissprot:EVGS_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:EVGS_ECOLI
DataBaseIDURL or Descriptions
# AltNameFOCB_ECOLIFormate channel 2
# BioGrid42614326
# EcoGeneEG14220focB
# FUNCTIONFOCB_ECOLIInvolved in the bidirectional transport of formate. {ECO 0000250}.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0005887integral component of plasma membrane; IBA:GO_Central.
# GO_functionGO:0015499formate transmembrane transporter activity; IBA:GO_Central.
# GO_processGO:0015724formate transport; IBA:GO_Central.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# Gene3D1.20.1080.10-; 1.
# InterProIPR000292For/NO2_transpt
# InterProIPR023271Aquaporin-like
# InterProIPR024002For/NO2_transpt_CS
# KEGG_Briteko02000Transporters
# OrganismFOCB_ECOLIEscherichia coli (strain K12)
# PATRIC32120371VBIEscCol129921_2588
# PIRC65025C65025
# PROSITEPS01005FORMATE_NITRITE_TP_1
# PROSITEPS01006FORMATE_NITRITE_TP_2
# PfamPF01226Form_Nir_trans
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameFOCB_ECOLIProbable formate transporter 2
# RefSeqNP_416987NC_000913.3
# RefSeqWP_001244734NZ_LN832404.1
# SIMILARITYBelongs to the FNT transporter (TC 2.A.44) family. {ECO0000305}.
# SUBCELLULAR LOCATIONFOCB_ECOLICell inner membrane {ECO 0000269|PubMed 15919996}; Multi-pass membrane protein {ECO 0000269|PubMed 15919996}.
# TCDB1.A.16.1the formate-nitrite transporter (fnt) family
# TIGRFAMsTIGR00790fnt
# eggNOGCOG2116LUCA
# eggNOGENOG4105TMBBacteria
BLASTswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:FOCB_ECOLI
BioCycECOL316407:JW2477-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2477-MONOMER
BioCycEcoCyc:FOCB-MONOMERhttp://biocyc.org/getid?id=EcoCyc:FOCB-MONOMER
COGCOG2116http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2116
DIPDIP-9671Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9671N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/4.2.91http://dx.doi.org/10.1093/dnares/4.2.91
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM63654http://www.ebi.ac.uk/ena/data/view/M63654
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB3972http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3972
EcoGeneEG14220http://www.ecogene.org/geneInfo.php?eg_id=EG14220
EnsemblBacteriaAAC75545http://www.ensemblgenomes.org/id/AAC75545
EnsemblBacteriaAAC75545http://www.ensemblgenomes.org/id/AAC75545
EnsemblBacteriaBAA16381http://www.ensemblgenomes.org/id/BAA16381
EnsemblBacteriaBAA16381http://www.ensemblgenomes.org/id/BAA16381
EnsemblBacteriaBAA16381http://www.ensemblgenomes.org/id/BAA16381
EnsemblBacteriab2492http://www.ensemblgenomes.org/id/b2492
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0005887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005887
GO_functionGO:0015499http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015499
GO_processGO:0015724http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015724
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
Gene3D1.20.1080.10http://www.cathdb.info/version/latest/superfamily/1.20.1080.10
GeneID949032http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=949032
HOGENOMHOG000271393http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000271393&db=HOGENOM6
InParanoidP77733http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P77733
IntActP77733http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P77733*
InterProIPR000292http://www.ebi.ac.uk/interpro/entry/IPR000292
InterProIPR023271http://www.ebi.ac.uk/interpro/entry/IPR023271
InterProIPR024002http://www.ebi.ac.uk/interpro/entry/IPR024002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW2477http://www.genome.jp/dbget-bin/www_bget?ecj:JW2477
KEGG_Geneeco:b2492http://www.genome.jp/dbget-bin/www_bget?eco:b2492
KEGG_OrthologyKO:K03459http://www.genome.jp/dbget-bin/www_bget?KO:K03459
MINTMINT-1231949http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1231949
OMAKILAIWFhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=KILAIWF
PROSITEPS01005http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS01005
PROSITEPS01006http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS01006
PSORT-Bswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:FOCB_ECOLI
PSORT2swissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:FOCB_ECOLI
PSORTswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:FOCB_ECOLI
PfamPF01226http://pfam.xfam.org/family/PF01226
Phobiusswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:FOCB_ECOLI
PhylomeDBP77733http://phylomedb.org/?seqid=P77733
ProteinModelPortalP77733http://www.proteinmodelportal.org/query/uniprot/P77733
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9205837http://www.ncbi.nlm.nih.gov/pubmed/9205837
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416987http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416987
RefSeqWP_001244734http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001244734
STRING511145.b2492http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b2492&targetmode=cogs
STRINGCOG2116http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG2116&targetmode=cogs
TCDB1.A.16.1http://www.tcdb.org/search/result.php?tc=1.A.16.1
TIGRFAMsTIGR00790http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00790
UniProtKB-ACP77733http://www.uniprot.org/uniprot/P77733
UniProtKBFOCB_ECOLIhttp://www.uniprot.org/uniprot/FOCB_ECOLI
chargeswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:FOCB_ECOLI
eggNOGCOG2116http://eggnogapi.embl.de/nog_data/html/tree/COG2116
eggNOGENOG4105TMBhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105TMB
epestfindswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:FOCB_ECOLI
garnierswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:FOCB_ECOLI
helixturnhelixswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:FOCB_ECOLI
hmomentswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:FOCB_ECOLI
iepswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:FOCB_ECOLI
inforesidueswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:FOCB_ECOLI
octanolswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:FOCB_ECOLI
pepcoilswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:FOCB_ECOLI
pepdigestswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:FOCB_ECOLI
pepinfoswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:FOCB_ECOLI
pepnetswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:FOCB_ECOLI
pepstatsswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:FOCB_ECOLI
pepwheelswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:FOCB_ECOLI
pepwindowswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:FOCB_ECOLI
sigcleaveswissprot:FOCB_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:FOCB_ECOLI
DataBaseIDURL or Descriptions
# BIOPHYSICOCHEMICAL PROPERTIESTemperature dependence: The MqsR-MqsA complex is exceptionally thermostable with a Tm of 83.4 degress Celsius versus 48.1 degress Celsius for MqsR and 61.1 degress Celsius for MqsA. {ECO0000269|PubMed:23172222};
# BioGrid4259247153
# COFACTORMQSA_ECOLIName=Zn(2+); Xref=ChEBI CHEBI 29105; Evidence={ECO 0000269|PubMed 20041169, ECO 0000269|PubMed 20823526, ECO 0000269|PubMed 21068382, ECO 0000269|PubMed 22789559}; Note=Binds 1 Zn(2+) ion per subunit. {ECO 0000269|PubMed 20041169, ECO 0000269|PubMed 20823526, ECO 0000269|PubMed 21068382, ECO 0000269|PubMed 22789559};
# DISRUPTION PHENOTYPEMQSA_ECOLIEssential for growth, it cannot be disrupted (PubMed 16768798). A double mqsR-mqsA deletion leads to increased rpoS mRNA levels, resulting in increased cyclic-di-GMP levels, increasing stress resistance, increased biofilm formation (PubMed 21516113). The double mutant has increased metabolism and respiration in the presence of the bile acid deoxycholate and consequently grows less well. Decreases cell survival in the presence of 20% deoxycholate (PubMed 25534751). {ECO 0000269|PubMed 16768798, ECO 0000269|PubMed 21516113, ECO 0000269|PubMed 25534751}.
# DOMAINMQSA_ECOLIThe Zn-binding N-terminal domain (residues 1-65) binds to the MqsR mRNA interferase toxin and makes contact with the DNA phosphate backbone, while the C-terminus (residues 70-131) binds the promoter in a sequence-specific manner. They are linked by a short flexible domain (PubMed 22789559). {ECO 0000269|PubMed 20041169, ECO 0000269|PubMed 21068382, ECO 0000269|PubMed 22789559}.
# EcoGeneEG13022mqsA
# FUNCTIONMQSA_ECOLIAntitoxin component of a type II toxin-antitoxin (TA) module. Labile antitoxin that binds to the MqsR mRNA interferase toxin and neutralizes its endoribonuclease activity. Overexpression prevents MqsR-mediated cessation of cell growth and inhibition of cell proliferation. Initially reported to act as a cotranscription factor with MqsA (PubMed 19690171, PubMed 20105222). Following further experiments, the MqsR-MqsA complex does not bind DNA and all reported data are actually due to a small fraction of free MqsA alone binding DNA. Addition of MqsR to a preformed MqsA-promoter DNA complex causes dissociation of the MqsA-DNA complex, probably causing derepression of MqsA- repressed transcripts (PubMed 23172222). MqsA binds to 2 palindromes in the promoter region of the mqsRA operon activating its transcription. Binds to other promoters, inducing mcbR and spy and repressing cspD among others (PubMed 20105222). Binds to and represses the rpoS promoter, the master stress regulator, resulting in decreased cyclic-di-GMP, reduced stress resistance, increased cell motility and decreased biofilm formation; in these experiments 5 TA modules are missing (lacks MazEF, RelEB, ChpB, YoeB-YefM, YafQ-DinJ) (PubMed 21516113). An earlier study showed overexpression alone increases biofilm formation, perhaps by repressing cspD; in these experiments the 5 TA modules are present (PubMed 20105222). Represses the csgD promoter. In the presence of stress, when this protein is degraded, the promoters it represses are derepressed, leading to biofilm formation (Probable). This TA system mediates cell growth during bile acid deoxycholate stress by degrading mRNA for probable deoxycholate-binding protein YgiS; bile acid detergents such as deoxycholate are important for host defense against bacterial growth in the gall bladder and duodenum (PubMed 25534751). {ECO 0000269|PubMed 19690171, ECO 0000269|PubMed 19943910, ECO 0000269|PubMed 20105222, ECO 0000269|PubMed 21516113, ECO 0000269|PubMed 23172222, ECO 0000269|PubMed 25534751, ECO 0000303|PubMed 24212724}.
# GO_functionGO:0043565sequence-specific DNA binding; IDA:EcoCyc.
# GO_functionGO:0046872metal ion binding; IEA:UniProtKB-KW.
# GO_processGO:0006351transcription, DNA-templated; IEA:UniProtKB-KW.
# GO_processGO:0006355regulation of transcription, DNA-templated; IMP:EcoCyc.
# GOslim_functionGO:0003677DNA binding
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0008150biological_process
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# Gene3D1.10.260.40-; 1.
# INDUCTIONMQSA_ECOLIInduced by amino acid starvation, glucose starvation and when translation is blocked. Induction is decreased in the absence of the Lon protease suggesting, by homology to other toxin-antitoxin systems, that Lon may degrade the MqsA antitoxin. Transcription is activated by MqsA (PubMed 20105222). It has been suggested that MqsA represses its own operon (PubMed 19690171). Not more induced in persister cells (PubMed 16768798). A member of the mqsRA operon. This operon induced by ectopic expression of toxins RelE, HicA and YafQ but not by MazF or HicA (PubMed 23432955). {ECO 0000269|PubMed 16768798, ECO 0000269|PubMed 19943910, ECO 0000269|PubMed 20105222, ECO 0000269|PubMed 23432955, ECO 0000303|PubMed 19690171}.
# INTERACTIONMQSA_ECOLIP69222 infA; NbExp=2; IntAct=EBI-1120353, EBI-1120746; P07000 pldB; NbExp=2; IntAct=EBI-1120353, EBI-9134416; P0ACQ0 rbsR; NbExp=3; IntAct=EBI-1120353, EBI-1119646; P0A7L8 rpmA; NbExp=2; IntAct=EBI-1120353, EBI-546875; P0AGB6 rpoE; NbExp=2; IntAct=EBI-1120353, EBI-1129580; P0AAU7 ybfE; NbExp=2; IntAct=EBI-1120353, EBI-9138393;
# IntActQ4686454
# InterProIPR001387Cro/C1-type_HTH
# InterProIPR010982Lambda_DNA-bd_dom
# InterProIPR022452MqsA
# InterProIPR022453Znf_MqsA-type
# InterProIPR032758MqsA/HigA-2
# KEGG_Briteko03000Transcription factors
# OrganismMQSA_ECOLIEscherichia coli (strain K12)
# PATRIC32121456VBIEscCol129921_3115
# PDB2KZ8NMR; -; A=1-131
# PDB3FMYX-ray; 1.40 A; A=62-131
# PDB3GA8X-ray; 1.70 A; A=1-76
# PDB3GN5X-ray; 2.15 A; A/B=1-131
# PDB3HI2X-ray; 2.00 A; A/C=1-76
# PDB3O9XX-ray; 2.10 A; A/B=1-131
# PIRC65089C65089
# PROSITEPS50943HTH_CROC1
# PTMMQSA_ECOLIDegraded in the presence of oxidative stress, maybe by the Lon and/or ClpX proteases. {ECO 0000303|PubMed 20105222, ECO 0000303|PubMed 21516113}.
# PfamPF15731MqsA_antitoxin
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameAntitoxin MqsA {ECO:0000303|PubMed20041169}
# RefSeqNP_417493NC_000913.3
# RefSeqWP_000650107NZ_LN832404.1
# SIMILARITYContains 1 HTH cro/C1-type DNA-binding domain. {ECO:0000255|PROSITE-ProRulePRU00257}.
# SMARTSM00530HTH_XRE
# SUBUNITMQSA_ECOLIHomodimer. Crystallizes as a heterotetramer with MqsA, MqsR-MqsA(2)-MqsR (PubMed 20041169). Purifies as a probable heterohexamer of 2 MqsR dimers and 1 MqsA dimer (PubMed 19690171). Binds promoter DNA as a dimer (PubMed 21068382). When the 2 dissociate the MsqR mRNA interferase becomes active. {ECO 0000269|PubMed 19690171, ECO 0000269|PubMed 20041169, ECO 0000269|PubMed 20823526, ECO 0000269|PubMed 21068382}.
# SUPFAMSSF47413SSF47413
# TIGRFAMsTIGR03830CxxCG_CxxCG_HTH
# TIGRFAMsTIGR03831YgiT_finger
# eggNOGCOG1396LUCA
# eggNOGENOG4105WJ3Bacteria
BLASTswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:MQSA_ECOLI
BioCycECOL316407:JW2989-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2989-MONOMER
BioCycEcoCyc:G7571-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G7571-MONOMER
BioCycMetaCyc:G7571-MONOMERhttp://biocyc.org/getid?id=MetaCyc:G7571-MONOMER
COGCOG1396http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1396
DIPDIP-12226Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-12226N
DOI10.1016/j.bbapap.2012.06.016http://dx.doi.org/10.1016/j.bbapap.2012.06.016
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1038/nchembio.560http://dx.doi.org/10.1038/nchembio.560
DOI10.1038/srep03186http://dx.doi.org/10.1038/srep03186
DOI10.1074/jbc.M109.032904http://dx.doi.org/10.1074/jbc.M109.032904
DOI10.1074/jbc.M110.172643http://dx.doi.org/10.1074/jbc.M110.172643
DOI10.1074/jbc.M112.421008http://dx.doi.org/10.1074/jbc.M112.421008
DOI10.1107/S1744309110028617http://dx.doi.org/10.1107/S1744309110028617
DOI10.1111/1462-2920.12749http://dx.doi.org/10.1111/1462-2920.12749
DOI10.1111/j.1365-2958.2009.06969.xhttp://dx.doi.org/10.1111/j.1365-2958.2009.06969.x
DOI10.1111/j.1462-2920.2009.02147.xhttp://dx.doi.org/10.1111/j.1462-2920.2009.02147.x
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1186/1471-2180-13-45http://dx.doi.org/10.1186/1471-2180-13-45
DOI10.1186/1471-2180-6-53http://dx.doi.org/10.1186/1471-2180-6-53
DOI10.1371/journal.ppat.1000706http://dx.doi.org/10.1371/journal.ppat.1000706
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU28377http://www.ebi.ac.uk/ena/data/view/U28377
EchoBASEEB2840http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2840
EcoGeneEG13022http://www.ecogene.org/geneInfo.php?eg_id=EG13022
EnsemblBacteriaAAC76057http://www.ensemblgenomes.org/id/AAC76057
EnsemblBacteriaAAC76057http://www.ensemblgenomes.org/id/AAC76057
EnsemblBacteriaBAE77077http://www.ensemblgenomes.org/id/BAE77077
EnsemblBacteriaBAE77077http://www.ensemblgenomes.org/id/BAE77077
EnsemblBacteriaBAE77077http://www.ensemblgenomes.org/id/BAE77077
EnsemblBacteriab3021http://www.ensemblgenomes.org/id/b3021
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_functionGO:0043565http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043565
GO_functionGO:0046872http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046872
GO_processGO:0006351http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006351
GO_processGO:0006355http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006355
GOslim_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
Gene3D1.10.260.40http://www.cathdb.info/version/latest/superfamily/1.10.260.40
GeneID945814http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945814
HOGENOMHOG000151625http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000151625&db=HOGENOM6
IntActQ46864http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=Q46864*
InterProIPR001387http://www.ebi.ac.uk/interpro/entry/IPR001387
InterProIPR010982http://www.ebi.ac.uk/interpro/entry/IPR010982
InterProIPR022452http://www.ebi.ac.uk/interpro/entry/IPR022452
InterProIPR022453http://www.ebi.ac.uk/interpro/entry/IPR022453
InterProIPR032758http://www.ebi.ac.uk/interpro/entry/IPR032758
KEGG_Briteko03000http://www.genome.jp/dbget-bin/www_bget?ko03000
KEGG_Geneecj:JW2989http://www.genome.jp/dbget-bin/www_bget?ecj:JW2989
KEGG_Geneeco:b3021http://www.genome.jp/dbget-bin/www_bget?eco:b3021
KEGG_OrthologyKO:K13655http://www.genome.jp/dbget-bin/www_bget?KO:K13655
OMACGEGIWDhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=CGEGIWD
PDB2KZ8http://www.ebi.ac.uk/pdbe-srv/view/entry/2KZ8
PDB3FMYhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3FMY
PDB3GA8http://www.ebi.ac.uk/pdbe-srv/view/entry/3GA8
PDB3GN5http://www.ebi.ac.uk/pdbe-srv/view/entry/3GN5
PDB3HI2http://www.ebi.ac.uk/pdbe-srv/view/entry/3HI2
PDB3O9Xhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3O9X
PDBsum2KZ8http://www.ebi.ac.uk/pdbsum/2KZ8
PDBsum3FMYhttp://www.ebi.ac.uk/pdbsum/3FMY
PDBsum3GA8http://www.ebi.ac.uk/pdbsum/3GA8
PDBsum3GN5http://www.ebi.ac.uk/pdbsum/3GN5
PDBsum3HI2http://www.ebi.ac.uk/pdbsum/3HI2
PDBsum3O9Xhttp://www.ebi.ac.uk/pdbsum/3O9X
PROSITEPS50943http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50943
PSORT-Bswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:MQSA_ECOLI
PSORT2swissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:MQSA_ECOLI
PSORTswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:MQSA_ECOLI
PfamPF15731http://pfam.xfam.org/family/PF15731
Phobiusswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:MQSA_ECOLI
ProteinModelPortalQ46864http://www.proteinmodelportal.org/query/uniprot/Q46864
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed16768798http://www.ncbi.nlm.nih.gov/pubmed/16768798
PubMed19690171http://www.ncbi.nlm.nih.gov/pubmed/19690171
PubMed19943910http://www.ncbi.nlm.nih.gov/pubmed/19943910
PubMed20041169http://www.ncbi.nlm.nih.gov/pubmed/20041169
PubMed20105222http://www.ncbi.nlm.nih.gov/pubmed/20105222
PubMed20823526http://www.ncbi.nlm.nih.gov/pubmed/20823526
PubMed21068382http://www.ncbi.nlm.nih.gov/pubmed/21068382
PubMed21516113http://www.ncbi.nlm.nih.gov/pubmed/21516113
PubMed22789559http://www.ncbi.nlm.nih.gov/pubmed/22789559
PubMed23172222http://www.ncbi.nlm.nih.gov/pubmed/23172222
PubMed23432955http://www.ncbi.nlm.nih.gov/pubmed/23432955
PubMed24212724http://www.ncbi.nlm.nih.gov/pubmed/24212724
PubMed25534751http://www.ncbi.nlm.nih.gov/pubmed/25534751
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_417493http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417493
RefSeqWP_000650107http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000650107
SMARTSM00530http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00530
SMRQ46864http://swissmodel.expasy.org/repository/smr.php?sptr_ac=Q46864
STRING511145.b3021http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3021&targetmode=cogs
STRINGCOG1396http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1396&targetmode=cogs
SUPFAMSSF47413http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF47413
TIGRFAMsTIGR03830http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR03830
TIGRFAMsTIGR03831http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR03831
UniProtKB-ACQ46864http://www.uniprot.org/uniprot/Q46864
UniProtKBMQSA_ECOLIhttp://www.uniprot.org/uniprot/MQSA_ECOLI
chargeswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:MQSA_ECOLI
eggNOGCOG1396http://eggnogapi.embl.de/nog_data/html/tree/COG1396
eggNOGENOG4105WJ3http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105WJ3
epestfindswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:MQSA_ECOLI
garnierswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:MQSA_ECOLI
helixturnhelixswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:MQSA_ECOLI
hmomentswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:MQSA_ECOLI
iepswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:MQSA_ECOLI
inforesidueswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:MQSA_ECOLI
octanolswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:MQSA_ECOLI
pepcoilswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:MQSA_ECOLI
pepdigestswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:MQSA_ECOLI
pepinfoswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:MQSA_ECOLI
pepnetswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:MQSA_ECOLI
pepstatsswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:MQSA_ECOLI
pepwheelswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:MQSA_ECOLI
pepwindowswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:MQSA_ECOLI
sigcleaveswissprot:MQSA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:MQSA_ECOLI
DataBaseIDURL or Descriptions
# CATALYTIC ACTIVITYHEMG_ECOLIProtoporphyrinogen IX + 3 menaquinone = protoporphyrin IX + 3 menaquinol.
# EcoGeneEG11485hemG
# FUNCTIONHEMG_ECOLICatalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor.
# GO_componentGO:0005829cytosol; IDA:EcoCyc.
# GO_functionGO:0004729oxygen-dependent protoporphyrinogen oxidase activity; IDA:EcoCyc.
# GO_functionGO:0009055electron carrier activity; IEA:InterPro.
# GO_functionGO:0010181FMN binding; IDA:EcoCyc.
# GO_functionGO:0070819menaquinone-dependent protoporphyrinogen oxidase activity; IDA:EcoCyc.
# GO_processGO:0006779porphyrin-containing compound biosynthetic process; IMP:EcoliWiki.
# GO_processGO:0006782protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway.
# GO_processGO:0006783heme biosynthetic process; IMP:EcoCyc.
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0016491oxidoreductase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# GOslim_processGO:0051186cofactor metabolic process
# Gene3D3.40.50.360-; 2.
# IntActP0ACB418
# InterProIPR001226Flavodoxin_CS
# InterProIPR008254Flavodoxin/NO_synth
# InterProIPR026816Flavodoxin_dom
# InterProIPR029039Flavoprotein-like_dom
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00860Porphyrin and chlorophyll metabolism
# OrganismHEMG_ECOLIEscherichia coli (strain K12)
# PATHWAYPorphyrin-containing compound metabolism; protoporphyrin- IX biosynthesis; protoporphyrin-IX from protoporphyrinogen-IX step 1/1.
# PATRIC32123197VBIEscCol129921_3964
# PIRJC2513JC2513
# PROSITEPS00201FLAVODOXIN
# PROSITEPS50902FLAVODOXIN_LIKE
# PfamPF12724Flavodoxin_5
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameHEMG_ECOLIProtoporphyrinogen IX dehydrogenase [menaquinone]
# RefSeqNP_418292NC_000913.3
# RefSeqWP_000853959NZ_LN832404.1
# SEQUENCE CAUTIONSequence=X54687; Type=Frameshift; Positions=159; Evidence={ECO0000305};
# SIMILARITYContains 1 flavodoxin-like domain. {ECO:0000255|PROSITE-ProRulePRU00088}.
# SUBUNITHEMG_ECOLIBelongs to a multi-protein complex.
# SUPFAMSSF52218SSF52218
# UniPathwayUPA00251UER00324
# eggNOGCOG4635LUCA
# eggNOGENOG4108RR8Bacteria
BLASTswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:HEMG_ECOLI
BioCycECOL316407:JW3827-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3827-MONOMER
BioCycEcoCyc:PROTOPORGENOXI-MONOMERhttp://biocyc.org/getid?id=EcoCyc:PROTOPORGENOXI-MONOMER
BioCycMetaCyc:PROTOPORGENOXI-MONOMERhttp://biocyc.org/getid?id=MetaCyc:PROTOPORGENOXI-MONOMER
COGCOG0716http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0716
DIPDIP-35890Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-35890N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/2.1.1http://dx.doi.org/10.1093/dnares/2.1.1
DOI10.1093/nar/18.21.6439http://dx.doi.org/10.1093/nar/18.21.6439
DOI10.1126/science.1379743http://dx.doi.org/10.1126/science.1379743
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:1.3.5.3http://www.genome.jp/dbget-bin/www_bget?EC:1.3.5.3
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM87049http://www.ebi.ac.uk/ena/data/view/M87049
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX54687http://www.ebi.ac.uk/ena/data/view/X54687
EMBLX68660http://www.ebi.ac.uk/ena/data/view/X68660
ENZYME1.3.5.3http://enzyme.expasy.org/EC/1.3.5.3
EchoBASEEB1448http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1448
EcoGeneEG11485http://www.ecogene.org/geneInfo.php?eg_id=EG11485
EnsemblBacteriaAAC76853http://www.ensemblgenomes.org/id/AAC76853
EnsemblBacteriaAAC76853http://www.ensemblgenomes.org/id/AAC76853
EnsemblBacteriaBAE77453http://www.ensemblgenomes.org/id/BAE77453
EnsemblBacteriaBAE77453http://www.ensemblgenomes.org/id/BAE77453
EnsemblBacteriaBAE77453http://www.ensemblgenomes.org/id/BAE77453
EnsemblBacteriab3850http://www.ensemblgenomes.org/id/b3850
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_functionGO:0004729http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004729
GO_functionGO:0009055http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009055
GO_functionGO:0010181http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0010181
GO_functionGO:0070819http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0070819
GO_processGO:0006779http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006779
GO_processGO:0006782http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006782
GO_processGO:0006783http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006783
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
GOslim_processGO:0051186http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0051186
Gene3D3.40.50.360http://www.cathdb.info/version/latest/superfamily/3.40.50.360
GeneID948331http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=948331
HOGENOMHOG000251295http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000251295&db=HOGENOM6
InParanoidP0ACB4http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0ACB4
IntActP0ACB4http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0ACB4*
IntEnz1.3.5.3http://www.ebi.ac.uk/intenz/query?cmd=Search&q=1.3.5.3
InterProIPR001226http://www.ebi.ac.uk/interpro/entry/IPR001226
InterProIPR008254http://www.ebi.ac.uk/interpro/entry/IPR008254
InterProIPR026816http://www.ebi.ac.uk/interpro/entry/IPR026816
InterProIPR029039http://www.ebi.ac.uk/interpro/entry/IPR029039
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW3827http://www.genome.jp/dbget-bin/www_bget?ecj:JW3827
KEGG_Geneeco:b3850http://www.genome.jp/dbget-bin/www_bget?eco:b3850
KEGG_OrthologyKO:K00230http://www.genome.jp/dbget-bin/www_bget?KO:K00230
KEGG_Pathwayko00860http://www.genome.jp/kegg-bin/show_pathway?ko00860
KEGG_Reactionrn:R09489http://www.genome.jp/dbget-bin/www_bget?rn:R09489
OMAKGTLECDhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=KGTLECD
PROSITEPS00201http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00201
PROSITEPS50902http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50902
PSORT-Bswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:HEMG_ECOLI
PSORT2swissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:HEMG_ECOLI
PSORTswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:HEMG_ECOLI
PfamPF12724http://pfam.xfam.org/family/PF12724
Phobiusswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:HEMG_ECOLI
PhylomeDBP0ACB4http://phylomedb.org/?seqid=P0ACB4
ProteinModelPortalP0ACB4http://www.proteinmodelportal.org/query/uniprot/P0ACB4
PubMed1379743http://www.ncbi.nlm.nih.gov/pubmed/1379743
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2243799http://www.ncbi.nlm.nih.gov/pubmed/2243799
PubMed7788523http://www.ncbi.nlm.nih.gov/pubmed/7788523
PubMed7916647http://www.ncbi.nlm.nih.gov/pubmed/7916647
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_418292http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_418292
RefSeqWP_000853959http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000853959
STRING511145.b3850http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3850&targetmode=cogs
STRINGCOG0716http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0716&targetmode=cogs
SUPFAMSSF52218http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF52218
UniProtKB-ACP0ACB4http://www.uniprot.org/uniprot/P0ACB4
UniProtKBHEMG_ECOLIhttp://www.uniprot.org/uniprot/HEMG_ECOLI
chargeswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:HEMG_ECOLI
eggNOGCOG4635http://eggnogapi.embl.de/nog_data/html/tree/COG4635
eggNOGENOG4108RR8http://eggnogapi.embl.de/nog_data/html/tree/ENOG4108RR8
epestfindswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:HEMG_ECOLI
garnierswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:HEMG_ECOLI
helixturnhelixswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:HEMG_ECOLI
hmomentswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:HEMG_ECOLI
iepswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:HEMG_ECOLI
inforesidueswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:HEMG_ECOLI
octanolswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:HEMG_ECOLI
pepcoilswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:HEMG_ECOLI
pepdigestswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:HEMG_ECOLI
pepinfoswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:HEMG_ECOLI
pepnetswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:HEMG_ECOLI
pepstatsswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:HEMG_ECOLI
pepwheelswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:HEMG_ECOLI
pepwindowswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:HEMG_ECOLI
sigcleaveswissprot:HEMG_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:HEMG_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426250716
# CATALYTIC ACTIVITYATP + H(2)O + Ni(2+)(Out) = ADP + phosphate + Ni(2+)(In). {ECO:0000255|HAMAP-RuleMF_01711}.
# EcoGeneEG12078nikD
# FUNCTIONNIKD_ECOLIPart of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. {ECO 0000255|HAMAP-Rule MF_01711}.
# GO_componentGO:0043190ATP-binding cassette (ABC) transporter complex; IEA:UniProtKB-HAMAP.
# GO_functionGO:0005524ATP binding; IEA:UniProtKB-HAMAP.
# GO_functionGO:0015413nickel-transporting ATPase activity; IEA:UniProtKB-HAMAP.
# GO_functionGO:0016151nickel cation binding; IEA:InterPro.
# GOslim_componentGO:0043234protein complex
# GOslim_functionGO:0016887ATPase activity
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_functionGO:0043167ion binding
# Gene3D3.40.50.300-; 1.
# IntActP3359311
# InterProIPR003439ABC_transporter-like
# InterProIPR003593AAA+_ATPase
# InterProIPR014138Nickel_NikD
# InterProIPR015857ABC_transpr_NikD
# InterProIPR017871ABC_transporter_CS
# InterProIPR027417P-loop_NTPase
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko01000 Enzymes
# KEGG_Briteko02000 M00440 Nickel transport system
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02010ABC transporters
# OrganismNIKD_ECOLIEscherichia coli (strain K12)
# PATRIC32122402VBIEscCol129921_3578
# PIRS47698S47698
# PROSITEPS00211ABC_TRANSPORTER_1
# PROSITEPS50893ABC_TRANSPORTER_2
# PROSITEPS51247NIKD
# PfamPF00005ABC_tran
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameNickel import ATP-binding protein NikD {ECO:0000255|HAMAP-RuleMF_01711}
# RefSeqNP_417936NC_000913.3
# RefSeqWP_001136229NZ_LN832404.1
# SIMILARITYBelongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. {ECO:0000255|HAMAP-RuleMF_01711}.
# SIMILARITYContains 1 ABC transporter domain. {ECO:0000255|HAMAP- RuleMF_01711}.
# SMARTSM00382AAA
# SUBCELLULAR LOCATIONNIKD_ECOLICell inner membrane {ECO 0000255|HAMAP- Rule MF_01711}; Peripheral membrane protein {ECO 0000255|HAMAP- Rule MF_01711}.
# SUBUNITThe complex is composed of two ATP-binding proteins (NikD and NikE), two transmembrane proteins (NikB and NikC) and a solute-binding protein (NikA). {ECO:0000255|HAMAP-RuleMF_01711}.
# SUPFAMSSF52540SSF52540
# TCDB3.A.1.5the atp-binding cassette (abc) superfamily
# TIGRFAMsTIGR02770nickel_nikD
# eggNOGCOG0444LUCA
# eggNOGENOG4106665Bacteria
BLASTswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:NIKD_ECOLI
BioCycECOL316407:JW3444-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3444-MONOMER
BioCycEcoCyc:NIKD-MONOMERhttp://biocyc.org/getid?id=EcoCyc:NIKD-MONOMER
BioCycMetaCyc:NIKD-MONOMERhttp://biocyc.org/getid?id=MetaCyc:NIKD-MONOMER
COGCOG0444http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0444
DIPDIP-10343Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-10343N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/22.13.2576http://dx.doi.org/10.1093/nar/22.13.2576
DOI10.1111/j.1365-2958.1993.tb01247.xhttp://dx.doi.org/10.1111/j.1365-2958.1993.tb01247.x
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:3.6.3.24 {ECO:0000255|HAMAP-Rule:MF_01711}http://www.genome.jp/dbget-bin/www_bget?EC:3.6.3.24 {ECO:0000255|HAMAP-Rule:MF_01711}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00039http://www.ebi.ac.uk/ena/data/view/U00039
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX73143http://www.ebi.ac.uk/ena/data/view/X73143
ENZYME3.6.3.24 {ECO:0000255|HAMAP-Rule:MF_01711}http://enzyme.expasy.org/EC/3.6.3.24 {ECO:0000255|HAMAP-Rule:MF_01711}
EchoBASEEB2003http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2003
EcoGeneEG12078http://www.ecogene.org/geneInfo.php?eg_id=EG12078
EnsemblBacteriaAAC76504http://www.ensemblgenomes.org/id/AAC76504
EnsemblBacteriaAAC76504http://www.ensemblgenomes.org/id/AAC76504
EnsemblBacteriaBAE77814http://www.ensemblgenomes.org/id/BAE77814
EnsemblBacteriaBAE77814http://www.ensemblgenomes.org/id/BAE77814
EnsemblBacteriaBAE77814http://www.ensemblgenomes.org/id/BAE77814
EnsemblBacteriab3479http://www.ensemblgenomes.org/id/b3479
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0043190http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043190
GO_functionGO:0005524http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005524
GO_functionGO:0015413http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015413
GO_functionGO:0016151http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016151
GOslim_componentGO:0043234http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043234
GOslim_functionGO:0016887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016887
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
Gene3D3.40.50.300http://www.cathdb.info/version/latest/superfamily/3.40.50.300
GeneID947989http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947989
InParanoidP33593http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P33593
IntActP33593http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P33593*
IntEnz3.6.3.24 {ECO:0000255|HAMAP-Rule:MF_01711}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=3.6.3.24 {ECO:0000255|HAMAP-Rule:MF_01711}
InterProIPR003439http://www.ebi.ac.uk/interpro/entry/IPR003439
InterProIPR003593http://www.ebi.ac.uk/interpro/entry/IPR003593
InterProIPR014138http://www.ebi.ac.uk/interpro/entry/IPR014138
InterProIPR015857http://www.ebi.ac.uk/interpro/entry/IPR015857
InterProIPR017871http://www.ebi.ac.uk/interpro/entry/IPR017871
InterProIPR027417http://www.ebi.ac.uk/interpro/entry/IPR027417
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW3444http://www.genome.jp/dbget-bin/www_bget?ecj:JW3444
KEGG_Geneeco:b3479http://www.genome.jp/dbget-bin/www_bget?eco:b3479
KEGG_OrthologyKO:K15587http://www.genome.jp/dbget-bin/www_bget?KO:K15587
KEGG_Pathwayko02010http://www.genome.jp/kegg-bin/show_pathway?ko02010
MINTMINT-1262144http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1262144
OMACHLLANDhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=CHLLAND
PROSITEPS00211http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00211
PROSITEPS50893http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50893
PROSITEPS51247http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51247
PSORT-Bswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:NIKD_ECOLI
PSORT2swissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:NIKD_ECOLI
PSORTswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:NIKD_ECOLI
PfamPF00005http://pfam.xfam.org/family/PF00005
Phobiusswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:NIKD_ECOLI
PhylomeDBP33593http://phylomedb.org/?seqid=P33593
ProteinModelPortalP33593http://www.proteinmodelportal.org/query/uniprot/P33593
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed7934931http://www.ncbi.nlm.nih.gov/pubmed/7934931
PubMed8041620http://www.ncbi.nlm.nih.gov/pubmed/8041620
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_417936http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417936
RefSeqWP_001136229http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001136229
SMARTSM00382http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00382
SMRP33593http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P33593
STRING511145.b3479http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3479&targetmode=cogs
STRINGCOG0444http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0444&targetmode=cogs
SUPFAMSSF52540http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF52540
TCDB3.A.1.5http://www.tcdb.org/search/result.php?tc=3.A.1.5
TIGRFAMsTIGR02770http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR02770
UniProtKB-ACP33593http://www.uniprot.org/uniprot/P33593
UniProtKBNIKD_ECOLIhttp://www.uniprot.org/uniprot/NIKD_ECOLI
chargeswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:NIKD_ECOLI
eggNOGCOG0444http://eggnogapi.embl.de/nog_data/html/tree/COG0444
eggNOGENOG4106665http://eggnogapi.embl.de/nog_data/html/tree/ENOG4106665
epestfindswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:NIKD_ECOLI
garnierswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:NIKD_ECOLI
helixturnhelixswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:NIKD_ECOLI
hmomentswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:NIKD_ECOLI
iepswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:NIKD_ECOLI
inforesidueswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:NIKD_ECOLI
octanolswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:NIKD_ECOLI
pepcoilswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:NIKD_ECOLI
pepdigestswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:NIKD_ECOLI
pepinfoswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:NIKD_ECOLI
pepnetswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:NIKD_ECOLI
pepstatsswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:NIKD_ECOLI
pepwheelswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:NIKD_ECOLI
pepwindowswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:NIKD_ECOLI
sigcleaveswissprot:NIKD_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:NIKD_ECOLI
DataBaseIDURL or Descriptions
# BioGrid4262924129
# EcoGeneEG12218dcrB
# FUNCTIONDCRB_ECOLIRequired for phage C1 adsorption.
# GO_componentGO:0042597periplasmic space; IDA:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# Gene3D3.40.1000.10-; 1.
# IntActP0AEE19
# InterProIPR014894DcrB
# InterProIPR016123Mog1/PsbP_a/b/a-sand
# MISCELLANEOUSDCRB_ECOLIMay interact with SdaC for phage adsorption.
# OrganismDCRB_ECOLIEscherichia coli (strain K12)
# PATRIC32122388VBIEscCol129921_3571
# PfamPF08786DUF1795
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameDCRB_ECOLIProtein DcrB
# RefSeqNP_417929NC_000913.3
# RefSeqWP_001245295NZ_LN832404.1
# SEQUENCE CAUTIONSequence=AAB18447.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO0000305};
# SUBCELLULAR LOCATIONDCRB_ECOLIPeriplasm.
# eggNOGENOG4108W1VBacteria
# eggNOGENOG4111IIQLUCA
BLASTswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:DCRB_ECOLI
BioCycECOL316407:JW5682-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW5682-MONOMER
BioCycEcoCyc:G7767-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G7767-MONOMER
DIPDIP-36187Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-36187N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/22.13.2576http://dx.doi.org/10.1093/nar/22.13.2576
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00039http://www.ebi.ac.uk/ena/data/view/U00039
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB2132http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2132
EcoGeneEG12218http://www.ecogene.org/geneInfo.php?eg_id=EG12218
EnsemblBacteriaAAC76497http://www.ensemblgenomes.org/id/AAC76497
EnsemblBacteriaAAC76497http://www.ensemblgenomes.org/id/AAC76497
EnsemblBacteriaBAE77821http://www.ensemblgenomes.org/id/BAE77821
EnsemblBacteriaBAE77821http://www.ensemblgenomes.org/id/BAE77821
EnsemblBacteriaBAE77821http://www.ensemblgenomes.org/id/BAE77821
EnsemblBacteriab3472http://www.ensemblgenomes.org/id/b3472
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0042597http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042597
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
Gene3D3.40.1000.10http://www.cathdb.info/version/latest/superfamily/3.40.1000.10
GeneID947983http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947983
HOGENOMHOG000125708http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000125708&db=HOGENOM6
InParanoidP0AEE1http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AEE1
IntActP0AEE1http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AEE1*
InterProIPR014894http://www.ebi.ac.uk/interpro/entry/IPR014894
InterProIPR016123http://www.ebi.ac.uk/interpro/entry/IPR016123
KEGG_Geneecj:JW5682http://www.genome.jp/dbget-bin/www_bget?ecj:JW5682
KEGG_Geneeco:b3472http://www.genome.jp/dbget-bin/www_bget?eco:b3472
OMAACDNSDThttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=ACDNSDT
PSORT-Bswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:DCRB_ECOLI
PSORT2swissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:DCRB_ECOLI
PSORTswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:DCRB_ECOLI
PfamPF08786http://pfam.xfam.org/family/PF08786
Phobiusswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:DCRB_ECOLI
ProteinModelPortalP0AEE1http://www.proteinmodelportal.org/query/uniprot/P0AEE1
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8041620http://www.ncbi.nlm.nih.gov/pubmed/8041620
PubMed8752353http://www.ncbi.nlm.nih.gov/pubmed/8752353
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_417929http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417929
RefSeqWP_001245295http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001245295
SMRP0AEE1http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0AEE1
STRING511145.b3472http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3472&targetmode=cogs
SWISS-2DPAGEP0AEE1http://world-2dpage.expasy.org/swiss-2dpage/protein/ac=P0AEE1
UniProtKB-ACP0AEE1http://www.uniprot.org/uniprot/P0AEE1
UniProtKBDCRB_ECOLIhttp://www.uniprot.org/uniprot/DCRB_ECOLI
chargeswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:DCRB_ECOLI
eggNOGENOG4108W1Vhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4108W1V
eggNOGENOG4111IIQhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4111IIQ
epestfindswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:DCRB_ECOLI
garnierswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:DCRB_ECOLI
helixturnhelixswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:DCRB_ECOLI
hmomentswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:DCRB_ECOLI
iepswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:DCRB_ECOLI
inforesidueswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:DCRB_ECOLI
octanolswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:DCRB_ECOLI
pepcoilswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:DCRB_ECOLI
pepdigestswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:DCRB_ECOLI
pepinfoswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:DCRB_ECOLI
pepnetswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:DCRB_ECOLI
pepstatsswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:DCRB_ECOLI
pepwheelswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:DCRB_ECOLI
pepwindowswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:DCRB_ECOLI
sigcleaveswissprot:DCRB_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:DCRB_ECOLI
DataBaseIDURL or Descriptions
# AltNameG-protein chaperone {ECO0000305}
# BioGrid425932510
# CATALYTIC ACTIVITYGTP + H(2)O = GDP + phosphate. {ECO:0000269|PubMed18950999}.
# CAUTIONWas originally thought to be a membrane protein kinase involved in phosphorylation of the AO and LAO periplasmic-binding proteins (PubMed:9733684). However, its role needs to be reexamined. {ECO0000305|PubMed:9733684}.
# EcoGeneEG11445argK
# FUNCTIONARGK_ECOLIBinds and hydrolyzes GTP (PubMed 18950999). Likely functions as a G-protein chaperone that assists AdoCbl cofactor delivery to the methylmalonyl-CoA mutase (MCM) ScpA and reactivation of the enzyme during catalysis. {ECO 0000269|PubMed 18950999, ECO 0000305}.
# GO_componentGO:0005622intracellular; IEA:GOC.
# GO_functionGO:0000155phosphorelay sensor kinase activity; IEA:InterPro.
# GO_functionGO:0003924GTPase activity; IDA:EcoCyc.
# GO_functionGO:0005524ATP binding; IEA:UniProtKB-KW.
# GO_functionGO:0005525GTP binding; IEA:UniProtKB-KW.
# GOslim_componentGO:0005622intracellular
# GOslim_functionGO:0003924GTPase activity
# GOslim_functionGO:0004871signal transducer activity
# GOslim_functionGO:0016301kinase activity
# GOslim_functionGO:0043167ion binding
# Gene3D1.10.287.130-; 1.
# Gene3D3.40.50.300-; 1.
# IntActP2725413
# InterProIPR003661HisK_dim/P
# InterProIPR005129GTPase_ArgK
# InterProIPR027417P-loop_NTPase
# KEGG_Briteko01000Enzymes
# MISCELLANEOUSPart of an operon that encodes enzymes converting succinate to propionate. {ECO:0000305|PubMed18950999}.
# OrganismARGK_ECOLIEscherichia coli (strain K12)
# PATRIC32121250VBIEscCol129921_3013
# PDB2P67X-ray; 1.80 A; A=2-331
# PIRE65076E65076
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameGTPase ArgK {ECO:0000305|PubMed18950999}
# RefSeqNP_417393NC_000913.3
# RefSeqWP_000606525NZ_LN832404.1
# SEQUENCE CAUTIONSequence=CAA47312.1; Type=Frameshift; Positions=Several; Evidence={ECO0000305};
# SIMILARITYBelongs to the SIMIBI class G3E GTPase family. ArgK/MeaB subfamily. {ECO0000305}.
# SUBUNITMonomer. Interacts with the methylmalonyl-CoA mutase ScpA. {ECO:0000269|PubMed18950999}.
# SUPFAMSSF52540SSF52540
# TIGRFAMsTIGR00750lao
# eggNOGCOG1703LUCA
# eggNOGENOG4105DJTBacteria
BLASTswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:ARGK_ECOLI
BioCycECOL316407:JW2885-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2885-MONOMER
BioCycEcoCyc:EG11445-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11445-MONOMER
BioCycMetaCyc:EG11445-MONOMERhttp://biocyc.org/getid?id=MetaCyc:EG11445-MONOMER
COGCOG1703http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1703
DOI10.1016/j.micres.2008.08.006http://dx.doi.org/10.1016/j.micres.2008.08.006
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:3.6.5.- {ECO:0000269|PubMed:18950999}http://www.genome.jp/dbget-bin/www_bget?EC:3.6.5.- {ECO:0000269|PubMed:18950999}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU28377http://www.ebi.ac.uk/ena/data/view/U28377
EMBLX66836http://www.ebi.ac.uk/ena/data/view/X66836
ENZYME3.6.5.- {ECO:0000269|PubMed:18950999}http://enzyme.expasy.org/EC/3.6.5.- {ECO:0000269|PubMed:18950999}
EchoBASEEB1415http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1415
EcoGeneEG11445http://www.ecogene.org/geneInfo.php?eg_id=EG11445
EnsemblBacteriaAAC75955http://www.ensemblgenomes.org/id/AAC75955
EnsemblBacteriaAAC75955http://www.ensemblgenomes.org/id/AAC75955
EnsemblBacteriaBAE76982http://www.ensemblgenomes.org/id/BAE76982
EnsemblBacteriaBAE76982http://www.ensemblgenomes.org/id/BAE76982
EnsemblBacteriaBAE76982http://www.ensemblgenomes.org/id/BAE76982
EnsemblBacteriab2918http://www.ensemblgenomes.org/id/b2918
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005622http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005622
GO_functionGO:0000155http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0000155
GO_functionGO:0003924http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003924
GO_functionGO:0005524http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005524
GO_functionGO:0005525http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005525
GOslim_componentGO:0005622http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005622
GOslim_functionGO:0003924http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003924
GOslim_functionGO:0004871http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004871
GOslim_functionGO:0016301http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016301
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
Gene3D1.10.287.130http://www.cathdb.info/version/latest/superfamily/1.10.287.130
Gene3D3.40.50.300http://www.cathdb.info/version/latest/superfamily/3.40.50.300
GeneID947412http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947412
HOGENOMHOG000003902http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000003902&db=HOGENOM6
InParanoidP27254http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P27254
IntActP27254http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P27254*
IntEnz3.6.5.- {ECO:0000269|PubMed:18950999}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=3.6.5.- {ECO:0000269|PubMed:18950999}
InterProIPR003661http://www.ebi.ac.uk/interpro/entry/IPR003661
InterProIPR005129http://www.ebi.ac.uk/interpro/entry/IPR005129
InterProIPR027417http://www.ebi.ac.uk/interpro/entry/IPR027417
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW2885http://www.genome.jp/dbget-bin/www_bget?ecj:JW2885
KEGG_Geneeco:b2918http://www.genome.jp/dbget-bin/www_bget?eco:b2918
KEGG_OrthologyKO:K07588http://www.genome.jp/dbget-bin/www_bget?KO:K07588
OMANKADGPHhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=NKADGPH
PDB2P67http://www.ebi.ac.uk/pdbe-srv/view/entry/2P67
PDBsum2P67http://www.ebi.ac.uk/pdbsum/2P67
PSORT-Bswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:ARGK_ECOLI
PSORT2swissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:ARGK_ECOLI
PSORTswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:ARGK_ECOLI
Phobiusswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:ARGK_ECOLI
PhylomeDBP27254http://phylomedb.org/?seqid=P27254
ProteinModelPortalP27254http://www.proteinmodelportal.org/query/uniprot/P27254
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed18950999http://www.ncbi.nlm.nih.gov/pubmed/18950999
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9733684http://www.ncbi.nlm.nih.gov/pubmed/9733684
RefSeqNP_417393http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417393
RefSeqWP_000606525http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000606525
SMRP27254http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P27254
STRING511145.b2918http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b2918&targetmode=cogs
STRINGCOG1703http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1703&targetmode=cogs
SUPFAMSSF52540http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF52540
TIGRFAMsTIGR00750http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00750
UniProtKB-ACP27254http://www.uniprot.org/uniprot/P27254
UniProtKBARGK_ECOLIhttp://www.uniprot.org/uniprot/ARGK_ECOLI
chargeswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:ARGK_ECOLI
eggNOGCOG1703http://eggnogapi.embl.de/nog_data/html/tree/COG1703
eggNOGENOG4105DJThttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105DJT
epestfindswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:ARGK_ECOLI
garnierswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:ARGK_ECOLI
helixturnhelixswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:ARGK_ECOLI
hmomentswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:ARGK_ECOLI
iepswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:ARGK_ECOLI
inforesidueswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:ARGK_ECOLI
octanolswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:ARGK_ECOLI
pepcoilswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:ARGK_ECOLI
pepdigestswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:ARGK_ECOLI
pepinfoswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:ARGK_ECOLI
pepnetswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:ARGK_ECOLI
pepstatsswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:ARGK_ECOLI
pepwheelswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:ARGK_ECOLI
pepwindowswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:ARGK_ECOLI
sigcleaveswissprot:ARGK_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:ARGK_ECOLI
DataBaseIDURL or Descriptions
# AltNameRIHA_ECOLICytidine/uridine-specific hydrolase
# BioGrid426164512
# ENZYME REGULATIONRIHA_ECOLISubject to catabolite repression.
# EcoGeneEG12701rihA
# FUNCTIONRIHA_ECOLIHydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively.
# GO_componentGO:0005829cytosol; IBA:GO_Central.
# GO_functionGO:0005509calcium ion binding; IDA:EcoliWiki.
# GO_functionGO:0008477purine nucleosidase activity; IBA:GO_Central.
# GO_functionGO:0045437uridine nucleosidase activity; IDA:EcoCyc.
# GO_functionGO:0047405pyrimidine-5'-nucleotide nucleosidase activity; IDA:EcoliWiki.
# GO_processGO:0006152purine nucleoside catabolic process; IBA:GO_Central.
# GO_processGO:0006206pyrimidine nucleobase metabolic process; IEA:UniProtKB-HAMAP.
# GO_processGO:0015949nucleobase-containing small molecule interconversion; IEA:InterPro.
# GO_processGO:0046133pyrimidine ribonucleoside catabolic process; IMP:EcoCyc.
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0016798hydrolase activity, acting on glycosyl bonds
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# GOslim_processGO:0034655nucleobase-containing compound catabolic process
# GOslim_processGO:0044281small molecule metabolic process
# Gene3D3.90.245.10-; 1.
# HAMAPMF_01431Pyrim_hydro_RihA
# IntActP4140915
# InterProIPR001910Inosine/uridine_hydrolase_dom
# InterProIPR015910I/U_nuclsd_hydro_CS
# InterProIPR022975Pyrim_hydro_RihA
# InterProIPR023186Inosine/uridine_hydrolase
# KEGG_Briteko01000Enzymes
# MISCELLANEOUSRIHA_ECOLIStrictly specific for ribonucleosides.
# OrganismRIHA_ECOLIEscherichia coli (strain K12)
# PANTHERPTHR12304PTHR12304
# PATRIC32116485VBIEscCol129921_0682
# PDB1YOEX-ray; 1.78 A; A=2-311
# PDB3G5IX-ray; 2.10 A; A/B/C/D=2-311
# PIRA64800A64800
# PROSITEPS01247IUNH
# PfamPF01156IU_nuc_hydro
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameRIHA_ECOLIPyrimidine-specific ribonucleoside hydrolase RihA
# RefSeqNP_415184NC_000913.3
# RefSeqWP_001207520NZ_LN832404.1
# SIMILARITYBelongs to the IUNH family. RihA subfamily. {ECO0000305}.
# SUPFAMSSF53590SSF53590
# eggNOGCOG1957LUCA
# eggNOGENOG4105DU0Bacteria
BLASTswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:RIHA_ECOLI
BioCycECOL316407:JW0646-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0646-MONOMER
BioCycEcoCyc:G6358-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6358-MONOMER
BioCycMetaCyc:G6358-MONOMERhttp://biocyc.org/getid?id=MetaCyc:G6358-MONOMER
COGCOG1957http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1957
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1074/jbc.M008300200http://dx.doi.org/10.1074/jbc.M008300200
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:3.2.-.-http://www.genome.jp/dbget-bin/www_bget?EC:3.2.-.-
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU10981http://www.ebi.ac.uk/ena/data/view/U10981
EMBLU82598http://www.ebi.ac.uk/ena/data/view/U82598
ENZYME3.2.-.-http://enzyme.expasy.org/EC/3.2.-.-
EchoBASEEB2563http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2563
EcoGeneEG12701http://www.ecogene.org/geneInfo.php?eg_id=EG12701
EnsemblBacteriaAAC73752http://www.ensemblgenomes.org/id/AAC73752
EnsemblBacteriaAAC73752http://www.ensemblgenomes.org/id/AAC73752
EnsemblBacteriaBAA35303http://www.ensemblgenomes.org/id/BAA35303
EnsemblBacteriaBAA35303http://www.ensemblgenomes.org/id/BAA35303
EnsemblBacteriaBAA35303http://www.ensemblgenomes.org/id/BAA35303
EnsemblBacteriab0651http://www.ensemblgenomes.org/id/b0651
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_functionGO:0005509http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005509
GO_functionGO:0008477http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008477
GO_functionGO:0045437http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0045437
GO_functionGO:0047405http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0047405
GO_processGO:0006152http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006152
GO_processGO:0006206http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006206
GO_processGO:0015949http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015949
GO_processGO:0046133http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046133
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0016798http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016798
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
GOslim_processGO:0034655http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034655
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
Gene3D3.90.245.10http://www.cathdb.info/version/latest/superfamily/3.90.245.10
GeneID945503http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945503
HAMAPMF_01431http://hamap.expasy.org/unirule/MF_01431
HOGENOMHOG000218839http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000218839&db=HOGENOM6
InParanoidP41409http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P41409
IntActP41409http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P41409*
IntEnz3.2http://www.ebi.ac.uk/intenz/query?cmd=Search&q=3.2
InterProIPR001910http://www.ebi.ac.uk/interpro/entry/IPR001910
InterProIPR015910http://www.ebi.ac.uk/interpro/entry/IPR015910
InterProIPR022975http://www.ebi.ac.uk/interpro/entry/IPR022975
InterProIPR023186http://www.ebi.ac.uk/interpro/entry/IPR023186
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW0646http://www.genome.jp/dbget-bin/www_bget?ecj:JW0646
KEGG_Geneeco:b0651http://www.genome.jp/dbget-bin/www_bget?eco:b0651
KEGG_OrthologyKO:K01250http://www.genome.jp/dbget-bin/www_bget?KO:K01250
OMAFLGRHINhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=FLGRHIN
PANTHERPTHR12304http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12304
PDB1YOEhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1YOE
PDB3G5Ihttp://www.ebi.ac.uk/pdbe-srv/view/entry/3G5I
PDBsum1YOEhttp://www.ebi.ac.uk/pdbsum/1YOE
PDBsum3G5Ihttp://www.ebi.ac.uk/pdbsum/3G5I
PROSITEPS01247http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS01247
PSORT-Bswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:RIHA_ECOLI
PSORT2swissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:RIHA_ECOLI
PSORTswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:RIHA_ECOLI
PfamPF01156http://pfam.xfam.org/family/PF01156
Phobiusswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:RIHA_ECOLI
PhylomeDBP41409http://phylomedb.org/?seqid=P41409
ProteinModelPortalP41409http://www.proteinmodelportal.org/query/uniprot/P41409
PubMed11027694http://www.ncbi.nlm.nih.gov/pubmed/11027694
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415184http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415184
RefSeqWP_001207520http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001207520
SMRP41409http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P41409
STRING511145.b0651http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0651&targetmode=cogs
STRINGCOG1957http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1957&targetmode=cogs
SUPFAMSSF53590http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF53590
UniProtKB-ACP41409http://www.uniprot.org/uniprot/P41409
UniProtKBRIHA_ECOLIhttp://www.uniprot.org/uniprot/RIHA_ECOLI
chargeswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:RIHA_ECOLI
eggNOGCOG1957http://eggnogapi.embl.de/nog_data/html/tree/COG1957
eggNOGENOG4105DU0http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105DU0
epestfindswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:RIHA_ECOLI
garnierswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:RIHA_ECOLI
helixturnhelixswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:RIHA_ECOLI
hmomentswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:RIHA_ECOLI
iepswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:RIHA_ECOLI
inforesidueswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:RIHA_ECOLI
octanolswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:RIHA_ECOLI
pepcoilswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:RIHA_ECOLI
pepdigestswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:RIHA_ECOLI
pepinfoswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:RIHA_ECOLI
pepnetswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:RIHA_ECOLI
pepstatsswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:RIHA_ECOLI
pepwheelswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:RIHA_ECOLI
pepwindowswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:RIHA_ECOLI
sigcleaveswissprot:RIHA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:RIHA_ECOLI
DataBaseIDURL or Descriptions
# BioGrid4263300313
# EcoGeneEG11188htrL
# FUNCTIONHTRL_ECOLIInvolved in lipopolysaccharide biosynthesis.
# GO_processGO:0009103lipopolysaccharide biosynthetic process; IEA:UniProtKB-KW.
# GOslim_processGO:0005975carbohydrate metabolic process
# GOslim_processGO:0006629lipid metabolic process
# GOslim_processGO:0009058biosynthetic process
# InterProIPR011735HtrL
# OrganismHTRL_ECOLIEscherichia coli (strain K12)
# PATRIC32122723VBIEscCol129921_3738
# PIRS47839S47839
# PfamPF09612HtrL_YibB
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameHTRL_ECOLIProtein HtrL
# RefSeqNP_418075NC_000913.3
# RefSeqWP_000842820NZ_LN832404.1
# SEQUENCE CAUTIONSequence=AAA91059.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=AAB18595.1; Type=Erroneous initiation; Evidence={ECO0000305};
# TIGRFAMsTIGR02192HtrL_YibB
# eggNOGENOG4108SEHBacteria
# eggNOGENOG4111H5FLUCA
BLASTswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:HTRL_ECOLI
BioCycECOL316407:JW5644-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW5644-MONOMER
BioCycEcoCyc:EG11188-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11188-MONOMER
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/16.8.3586http://dx.doi.org/10.1093/nar/16.8.3586
DOI10.1093/nar/22.13.2576http://dx.doi.org/10.1093/nar/22.13.2576
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM33577http://www.ebi.ac.uk/ena/data/view/M33577
EMBLM94888http://www.ebi.ac.uk/ena/data/view/M94888
EMBLU00039http://www.ebi.ac.uk/ena/data/view/U00039
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX06690http://www.ebi.ac.uk/ena/data/view/X06690
EchoBASEEB1174http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1174
EcoGeneEG11188http://www.ecogene.org/geneInfo.php?eg_id=EG11188
EnsemblBacteriaAAC76642http://www.ensemblgenomes.org/id/AAC76642
EnsemblBacteriaAAC76642http://www.ensemblgenomes.org/id/AAC76642
EnsemblBacteriaBAE77674http://www.ensemblgenomes.org/id/BAE77674
EnsemblBacteriaBAE77674http://www.ensemblgenomes.org/id/BAE77674
EnsemblBacteriaBAE77674http://www.ensemblgenomes.org/id/BAE77674
EnsemblBacteriab3618http://www.ensemblgenomes.org/id/b3618
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_processGO:0009103http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009103
GOslim_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GOslim_processGO:0006629http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006629
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GeneID948137http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=948137
HOGENOMHOG000054844http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000054844&db=HOGENOM6
InParanoidP25666http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P25666
InterProIPR011735http://www.ebi.ac.uk/interpro/entry/IPR011735
KEGG_Geneecj:JW5644http://www.genome.jp/dbget-bin/www_bget?ecj:JW5644
KEGG_Geneeco:b3618http://www.genome.jp/dbget-bin/www_bget?eco:b3618
OMAFFDIGRGhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=FFDIGRG
PSORT-Bswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:HTRL_ECOLI
PSORT2swissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:HTRL_ECOLI
PSORTswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:HTRL_ECOLI
PfamPF09612http://pfam.xfam.org/family/PF09612
Phobiusswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:HTRL_ECOLI
PhylomeDBP25666http://phylomedb.org/?seqid=P25666
ProteinModelPortalP25666http://www.proteinmodelportal.org/query/uniprot/P25666
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2198271http://www.ncbi.nlm.nih.gov/pubmed/2198271
PubMed3287333http://www.ncbi.nlm.nih.gov/pubmed/3287333
PubMed8041620http://www.ncbi.nlm.nih.gov/pubmed/8041620
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_418075http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_418075
RefSeqWP_000842820http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000842820
STRING511145.b3618http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3618&targetmode=cogs
TIGRFAMsTIGR02192http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR02192
UniProtKB-ACP25666http://www.uniprot.org/uniprot/P25666
UniProtKBHTRL_ECOLIhttp://www.uniprot.org/uniprot/HTRL_ECOLI
chargeswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:HTRL_ECOLI
eggNOGENOG4108SEHhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4108SEH
eggNOGENOG4111H5Fhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4111H5F
epestfindswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:HTRL_ECOLI
garnierswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:HTRL_ECOLI
helixturnhelixswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:HTRL_ECOLI
hmomentswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:HTRL_ECOLI
iepswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:HTRL_ECOLI
inforesidueswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:HTRL_ECOLI
octanolswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:HTRL_ECOLI
pepcoilswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:HTRL_ECOLI
pepdigestswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:HTRL_ECOLI
pepinfoswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:HTRL_ECOLI
pepnetswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:HTRL_ECOLI
pepstatsswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:HTRL_ECOLI
pepwheelswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:HTRL_ECOLI
pepwindowswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:HTRL_ECOLI
sigcleaveswissprot:HTRL_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:HTRL_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426119711
# EcoGeneEG12308yfhH
# GO_functionGO:0003677DNA binding; IEA:UniProtKB-KW.
# GO_functionGO:0003700transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
# GO_functionGO:0030246carbohydrate binding; IEA:InterPro.
# GO_processGO:0005975carbohydrate metabolic process; IEA:InterPro.
# GO_processGO:0006351transcription, DNA-templated; IEA:UniProtKB-KW.
# GOslim_functionGO:0001071nucleic acid binding transcription factor activity
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0003677DNA binding
# GOslim_processGO:0005975carbohydrate metabolic process
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# Gene3D1.10.10.10-; 1.
# InterProIPR000281HTH_RpiR
# InterProIPR001347SIS
# InterProIPR009057Homeodomain-like
# InterProIPR011991WHTH_DNA-bd_dom
# OrganismYFHH_ECOLIEscherichia coli (strain K12)
# PATRIC32120521VBIEscCol129921_2663
# PROSITEPS51071HTH_RPIR
# PROSITEPS51464SIS
# PfamPF01380SIS
# PfamPF01418HTH_6
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYFHH_ECOLIUncharacterized HTH-type transcriptional regulator YfhH
# RefSeqNP_417056NC_000913.3
# RefSeqWP_001013779NZ_LN832404.1
# SEQUENCE CAUTIONSequence=AAA79823.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=BAA10911.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO0000305};
# SIMILARITYContains 1 HTH rpiR-type DNA-binding domain. {ECO:0000255|PROSITE-ProRulePRU00390}.
# SIMILARITYContains 1 SIS domain. {ECO:0000255|PROSITE- ProRulePRU00797}.
# SUPFAMSSF46689SSF46689
# eggNOGCOG1737LUCA
# eggNOGENOG4106G6QBacteria
BLASTswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YFHH_ECOLI
BioCycECOL316407:JW2545-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2545-MONOMER
BioCycEcoCyc:EG12308-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG12308-MONOMER
DIPDIP-12050Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-12050N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/22.22.4756http://dx.doi.org/10.1093/nar/22.22.4756
DOI10.1111/j.1365-2958.1992.tb01540.xhttp://dx.doi.org/10.1111/j.1365-2958.1992.tb01540.x
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLD64044http://www.ebi.ac.uk/ena/data/view/D64044
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU36841http://www.ebi.ac.uk/ena/data/view/U36841
EMBLX72336http://www.ebi.ac.uk/ena/data/view/X72336
EchoBASEEB2214http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2214
EcoGeneEG12308http://www.ecogene.org/geneInfo.php?eg_id=EG12308
EnsemblBacteriaAAC75614http://www.ensemblgenomes.org/id/AAC75614
EnsemblBacteriaAAC75614http://www.ensemblgenomes.org/id/AAC75614
EnsemblBacteriaBAE76737http://www.ensemblgenomes.org/id/BAE76737
EnsemblBacteriaBAE76737http://www.ensemblgenomes.org/id/BAE76737
EnsemblBacteriaBAE76737http://www.ensemblgenomes.org/id/BAE76737
EnsemblBacteriab2561http://www.ensemblgenomes.org/id/b2561
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GO_functionGO:0003700http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003700
GO_functionGO:0030246http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030246
GO_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GO_processGO:0006351http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006351
GOslim_functionGO:0001071http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0001071
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GOslim_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
Gene3D1.10.10.10http://www.cathdb.info/version/latest/superfamily/1.10.10.10
GeneID947030http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947030
HOGENOMHOG000027157http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000027157&db=HOGENOM6
InParanoidP37767http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P37767
InterProIPR000281http://www.ebi.ac.uk/interpro/entry/IPR000281
InterProIPR001347http://www.ebi.ac.uk/interpro/entry/IPR001347
InterProIPR009057http://www.ebi.ac.uk/interpro/entry/IPR009057
InterProIPR011991http://www.ebi.ac.uk/interpro/entry/IPR011991
KEGG_Geneecj:JW2545http://www.genome.jp/dbget-bin/www_bget?ecj:JW2545
KEGG_Geneeco:b2561http://www.genome.jp/dbget-bin/www_bget?eco:b2561
OMAQDLEHAPhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=QDLEHAP
PROSITEPS51071http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51071
PROSITEPS51464http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS51464
PSORT-Bswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YFHH_ECOLI
PSORT2swissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YFHH_ECOLI
PSORTswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YFHH_ECOLI
PfamPF01380http://pfam.xfam.org/family/PF01380
PfamPF01418http://pfam.xfam.org/family/PF01418
Phobiusswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YFHH_ECOLI
PhylomeDBP37767http://phylomedb.org/?seqid=P37767
ProteinModelPortalP37767http://www.proteinmodelportal.org/query/uniprot/P37767
PubMed1602968http://www.ncbi.nlm.nih.gov/pubmed/1602968
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed7984428http://www.ncbi.nlm.nih.gov/pubmed/7984428
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_417056http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417056
RefSeqWP_001013779http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001013779
SMRP37767http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P37767
STRING511145.b2561http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b2561&targetmode=cogs
SUPFAMSSF46689http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF46689
UniProtKB-ACP37767http://www.uniprot.org/uniprot/P37767
UniProtKBYFHH_ECOLIhttp://www.uniprot.org/uniprot/YFHH_ECOLI
chargeswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YFHH_ECOLI
eggNOGCOG1737http://eggnogapi.embl.de/nog_data/html/tree/COG1737
eggNOGENOG4106G6Qhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4106G6Q
epestfindswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YFHH_ECOLI
garnierswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YFHH_ECOLI
helixturnhelixswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YFHH_ECOLI
hmomentswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YFHH_ECOLI
iepswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YFHH_ECOLI
inforesidueswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YFHH_ECOLI
octanolswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YFHH_ECOLI
pepcoilswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YFHH_ECOLI
pepdigestswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YFHH_ECOLI
pepinfoswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YFHH_ECOLI
pepnetswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YFHH_ECOLI
pepstatsswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YFHH_ECOLI
pepwheelswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YFHH_ECOLI
pepwindowswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YFHH_ECOLI
sigcleaveswissprot:YFHH_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YFHH_ECOLI
DataBaseIDURL or Descriptions
# BIOPHYSICOCHEMICAL PROPERTIESGUDD_ECOLIKinetic parameters KM=16 uM for idarate {ECO 0000269|PubMed 9772162}; KM=60 uM for glucarate {ECO 0000269|PubMed 9772162};
# BRENDA4.2.1.402026
# BioGrid426228712
# CATALYTIC ACTIVITYGUDD_ECOLID-glucarate = 5-dehydro-4-deoxy-D-glucarate + H(2)O.
# COFACTORGUDD_ECOLIName=Mg(2+); Xref=ChEBI CHEBI 18420; Evidence={ECO 0000269|PubMed 10769114};
# DrugBankDB02325Isopropyl Alcohol
# EcoGeneEG13167gudD
# FUNCTIONGUDD_ECOLICatalyzes the dehydration of glucarate to 5-keto-4- deoxy-D-glucarate (5-kdGluc). Also acts on L-idarate.
# GO_functionGO:0000287magnesium ion binding; IDA:UniProtKB.
# GO_functionGO:0008872glucarate dehydratase activity; IDA:UniProtKB.
# GO_processGO:0042838D-glucarate catabolic process; IDA:UniProtKB.
# GOslim_functionGO:0016829lyase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0005975carbohydrate metabolic process
# GOslim_processGO:0009056catabolic process
# GOslim_processGO:0044281small molecule metabolic process
# Gene3D3.20.20.120-; 1.
# Gene3D3.30.390.10-; 1.
# IntActP0AES23
# InterProIPR001354MR/MLE/MAL
# InterProIPR013342Mandelate_racemase_C
# InterProIPR017653Glucarate_dehydratase
# InterProIPR029017Enolase_N-like
# InterProIPR029065Enolase_C-like
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00053Ascorbate and aldarate metabolism
# OrganismGUDD_ECOLIEscherichia coli (strain K12)
# PANTHERPTHR13794PTHR13794; 2
# PATHWAYCarbohydrate acid metabolism; D-glucarate degradation; 2,5-dioxopentanoate from D-glucarate step 1/2.
# PATRIC32120990VBIEscCol129921_2887
# PDB1EC7X-ray; 1.90 A; A/B/C/D=1-446
# PDB1EC8X-ray; 1.90 A; A/B/C/D=1-446
# PDB1EC9X-ray; 2.00 A; A/B/C/D=1-446
# PDB1ECQX-ray; 2.00 A; A/B/C/D=1-446
# PDB1JCTX-ray; 2.75 A; A/B=1-446
# PDB1JDFX-ray; 2.00 A; A/B/C/D=1-446
# PDB3PWGX-ray; 2.00 A; A/B/C/D=1-446
# PDB3PWIX-ray; 2.23 A; A/B=1-446
# PDB4GYPX-ray; 2.10 A; A/B=1-446
# PIRG65060G65060
# PfamPF13378MR_MLE_C
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameGUDD_ECOLIGlucarate dehydratase
# RefSeqNP_417267NC_000913.3
# RefSeqWP_000098255NZ_LN832404.1
# SIMILARITYBelongs to the mandelate racemase/muconate lactonizing enzyme family. GlucD subfamily. {ECO0000305}.
# SMARTSM00922MR_MLE
# SUBUNITGUDD_ECOLIHomodimer. {ECO 0000269|PubMed 10769114, ECO 0000269|PubMed 11513584}.
# SUPFAMSSF51604SSF51604
# SUPFAMSSF54826SSF54826
# TIGRFAMsTIGR03247glucar-dehydr
# UniPathwayUPA00564UER00627
# eggNOGCOG4948LUCA
# eggNOGENOG4105EQXBacteria
BLASTswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:GUDD_ECOLI
BioCycECOL316407:JW2758-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2758-MONOMER
BioCycEcoCyc:GLUCARDEHYDRA-MONOMERhttp://biocyc.org/getid?id=EcoCyc:GLUCARDEHYDRA-MONOMER
BioCycMetaCyc:GLUCARDEHYDRA-MONOMERhttp://biocyc.org/getid?id=MetaCyc:GLUCARDEHYDRA-MONOMER
COGCOG4948http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4948
DOI10.1021/bi010733bhttp://dx.doi.org/10.1021/bi010733b
DOI10.1021/bi981124fhttp://dx.doi.org/10.1021/bi981124f
DOI10.1021/bi992782ihttp://dx.doi.org/10.1021/bi992782i
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/4.2.91http://dx.doi.org/10.1093/dnares/4.2.91
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DrugBankDB02325http://www.drugbank.ca/drugs/DB02325
EC_numberEC:4.2.1.40http://www.genome.jp/dbget-bin/www_bget?EC:4.2.1.40
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU29581http://www.ebi.ac.uk/ena/data/view/U29581
ENZYME4.2.1.40http://enzyme.expasy.org/EC/4.2.1.40
EchoBASEEB2959http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2959
EcoGeneEG13167http://www.ecogene.org/geneInfo.php?eg_id=EG13167
EnsemblBacteriaAAC75829http://www.ensemblgenomes.org/id/AAC75829
EnsemblBacteriaAAC75829http://www.ensemblgenomes.org/id/AAC75829
EnsemblBacteriaBAA16572http://www.ensemblgenomes.org/id/BAA16572
EnsemblBacteriaBAA16572http://www.ensemblgenomes.org/id/BAA16572
EnsemblBacteriaBAA16572http://www.ensemblgenomes.org/id/BAA16572
EnsemblBacteriab2787http://www.ensemblgenomes.org/id/b2787
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_functionGO:0000287http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0000287
GO_functionGO:0008872http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008872
GO_processGO:0042838http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042838
GOslim_functionGO:0016829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016829
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GOslim_processGO:0009056http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009056
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
Gene3D3.20.20.120http://www.cathdb.info/version/latest/superfamily/3.20.20.120
Gene3D3.30.390.10http://www.cathdb.info/version/latest/superfamily/3.30.390.10
GeneID947258http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947258
HOGENOMHOG000238021http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000238021&db=HOGENOM6
InParanoidP0AES2http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AES2
IntActP0AES2http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AES2*
IntEnz4.2.1.40http://www.ebi.ac.uk/intenz/query?cmd=Search&q=4.2.1.40
InterProIPR001354http://www.ebi.ac.uk/interpro/entry/IPR001354
InterProIPR013342http://www.ebi.ac.uk/interpro/entry/IPR013342
InterProIPR017653http://www.ebi.ac.uk/interpro/entry/IPR017653
InterProIPR029017http://www.ebi.ac.uk/interpro/entry/IPR029017
InterProIPR029065http://www.ebi.ac.uk/interpro/entry/IPR029065
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW2758http://www.genome.jp/dbget-bin/www_bget?ecj:JW2758
KEGG_Geneeco:b2787http://www.genome.jp/dbget-bin/www_bget?eco:b2787
KEGG_OrthologyKO:K01706http://www.genome.jp/dbget-bin/www_bget?KO:K01706
KEGG_Pathwayko00053http://www.genome.jp/kegg-bin/show_pathway?ko00053
KEGG_Reactionrn:R02752http://www.genome.jp/dbget-bin/www_bget?rn:R02752
KEGG_Reactionrn:R08056http://www.genome.jp/dbget-bin/www_bget?rn:R08056
OMARVAQMCNhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=RVAQMCN
PANTHERPTHR13794http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13794
PDB1EC7http://www.ebi.ac.uk/pdbe-srv/view/entry/1EC7
PDB1EC8http://www.ebi.ac.uk/pdbe-srv/view/entry/1EC8
PDB1EC9http://www.ebi.ac.uk/pdbe-srv/view/entry/1EC9
PDB1ECQhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1ECQ
PDB1JCThttp://www.ebi.ac.uk/pdbe-srv/view/entry/1JCT
PDB1JDFhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1JDF
PDB3PWGhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3PWG
PDB3PWIhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3PWI
PDB4GYPhttp://www.ebi.ac.uk/pdbe-srv/view/entry/4GYP
PDBsum1EC7http://www.ebi.ac.uk/pdbsum/1EC7
PDBsum1EC8http://www.ebi.ac.uk/pdbsum/1EC8
PDBsum1EC9http://www.ebi.ac.uk/pdbsum/1EC9
PDBsum1ECQhttp://www.ebi.ac.uk/pdbsum/1ECQ
PDBsum1JCThttp://www.ebi.ac.uk/pdbsum/1JCT
PDBsum1JDFhttp://www.ebi.ac.uk/pdbsum/1JDF
PDBsum3PWGhttp://www.ebi.ac.uk/pdbsum/3PWG
PDBsum3PWIhttp://www.ebi.ac.uk/pdbsum/3PWI
PDBsum4GYPhttp://www.ebi.ac.uk/pdbsum/4GYP
PSORT-Bswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:GUDD_ECOLI
PSORT2swissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:GUDD_ECOLI
PSORTswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:GUDD_ECOLI
PfamPF13378http://pfam.xfam.org/family/PF13378
Phobiusswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:GUDD_ECOLI
PhylomeDBP0AES2http://phylomedb.org/?seqid=P0AES2
ProteinModelPortalP0AES2http://www.proteinmodelportal.org/query/uniprot/P0AES2
PubMed10769114http://www.ncbi.nlm.nih.gov/pubmed/10769114
PubMed11513584http://www.ncbi.nlm.nih.gov/pubmed/11513584
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9205837http://www.ncbi.nlm.nih.gov/pubmed/9205837
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9772162http://www.ncbi.nlm.nih.gov/pubmed/9772162
RefSeqNP_417267http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417267
RefSeqWP_000098255http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000098255
SMARTSM00922http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00922
SMRP0AES2http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0AES2
STRING511145.b2787http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b2787&targetmode=cogs
STRINGCOG4948http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG4948&targetmode=cogs
SUPFAMSSF51604http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF51604
SUPFAMSSF54826http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF54826
TIGRFAMsTIGR03247http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR03247
UniProtKB-ACP0AES2http://www.uniprot.org/uniprot/P0AES2
UniProtKBGUDD_ECOLIhttp://www.uniprot.org/uniprot/GUDD_ECOLI
chargeswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:GUDD_ECOLI
eggNOGCOG4948http://eggnogapi.embl.de/nog_data/html/tree/COG4948
eggNOGENOG4105EQXhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105EQX
epestfindswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:GUDD_ECOLI
garnierswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:GUDD_ECOLI
helixturnhelixswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:GUDD_ECOLI
hmomentswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:GUDD_ECOLI
iepswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:GUDD_ECOLI
inforesidueswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:GUDD_ECOLI
octanolswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:GUDD_ECOLI
pepcoilswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:GUDD_ECOLI
pepdigestswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:GUDD_ECOLI
pepinfoswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:GUDD_ECOLI
pepnetswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:GUDD_ECOLI
pepstatsswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:GUDD_ECOLI
pepwheelswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:GUDD_ECOLI
pepwindowswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:GUDD_ECOLI
sigcleaveswissprot:GUDD_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:GUDD_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426335115
# EcoGeneEG14268flgD
# FUNCTIONFLGD_ECOLIRequired for flagellar hook formation. May act as a scaffolding protein.
# GO_componentGO:0005829cytosol; IDA:EcoCyc.
# GO_componentGO:0009424bacterial-type flagellum hook; IBA:GO_Central.
# GO_processGO:0044781bacterial-type flagellum organization; IEA:UniProtKB-KW.
# GO_processGO:0071978bacterial-type flagellum-dependent swarming motility; IBA:GO_Central.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005829cytosol
# GOslim_processGO:0008150biological_process
# GOslim_processGO:0048870cell motility
# IntActP759363
# InterProIPR005648FlgD
# InterProIPR025963FLgD_Tudor
# InterProIPR025965FlgD_Ig
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko02035 Bacterial motility proteins
# KEGG_Pathwayko02040Flagellar assembly
# OrganismFLGD_ECOLIEscherichia coli (strain K12)
# PATRIC32117391VBIEscCol129921_1118
# PIRH64850H64850
# PfamPF03963FlgD
# PfamPF13860FlgD_ig
# PfamPF13861FLgD_tudor
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameFLGD_ECOLIBasal-body rod modification protein FlgD
# RefSeqNP_415593NC_000913.3
# RefSeqWP_000020486NZ_LN832404.1
# SIMILARITYBelongs to the FlgD family. {ECO0000305}.
# eggNOGCOG1843LUCA
# eggNOGENOG4105W00Bacteria
BLASTswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:FLGD_ECOLI
BioCycECOL316407:JW1062-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1062-MONOMER
BioCycEcoCyc:G360-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G360-MONOMER
COGCOG1843http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1843
DIPDIP-9632Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9632N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB4016http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB4016
EcoGeneEG14268http://www.ecogene.org/geneInfo.php?eg_id=EG14268
EnsemblBacteriaAAC74159http://www.ensemblgenomes.org/id/AAC74159
EnsemblBacteriaAAC74159http://www.ensemblgenomes.org/id/AAC74159
EnsemblBacteriaBAA35883http://www.ensemblgenomes.org/id/BAA35883
EnsemblBacteriaBAA35883http://www.ensemblgenomes.org/id/BAA35883
EnsemblBacteriaBAA35883http://www.ensemblgenomes.org/id/BAA35883
EnsemblBacteriab1075http://www.ensemblgenomes.org/id/b1075
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_componentGO:0009424http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009424
GO_processGO:0044781http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044781
GO_processGO:0071978http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0071978
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
GOslim_processGO:0048870http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0048870
GeneID945813http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945813
HOGENOMHOG000265647http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000265647&db=HOGENOM6
InParanoidP75936http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P75936
IntActP75936http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P75936*
InterProIPR005648http://www.ebi.ac.uk/interpro/entry/IPR005648
InterProIPR025963http://www.ebi.ac.uk/interpro/entry/IPR025963
InterProIPR025965http://www.ebi.ac.uk/interpro/entry/IPR025965
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko02035http://www.genome.jp/dbget-bin/www_bget?ko02035
KEGG_Geneecj:JW1062http://www.genome.jp/dbget-bin/www_bget?ecj:JW1062
KEGG_Geneeco:b1075http://www.genome.jp/dbget-bin/www_bget?eco:b1075
KEGG_OrthologyKO:K02389http://www.genome.jp/dbget-bin/www_bget?KO:K02389
KEGG_Pathwayko02040http://www.genome.jp/kegg-bin/show_pathway?ko02040
OMAYTWNGKDhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=YTWNGKD
PSORT-Bswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:FLGD_ECOLI
PSORT2swissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:FLGD_ECOLI
PSORTswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:FLGD_ECOLI
PfamPF03963http://pfam.xfam.org/family/PF03963
PfamPF13860http://pfam.xfam.org/family/PF13860
PfamPF13861http://pfam.xfam.org/family/PF13861
Phobiusswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:FLGD_ECOLI
PhylomeDBP75936http://phylomedb.org/?seqid=P75936
ProteinModelPortalP75936http://www.proteinmodelportal.org/query/uniprot/P75936
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415593http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415593
RefSeqWP_000020486http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000020486
SMRP75936http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P75936
STRING511145.b1075http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1075&targetmode=cogs
STRINGCOG1843http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1843&targetmode=cogs
UniProtKB-ACP75936http://www.uniprot.org/uniprot/P75936
UniProtKBFLGD_ECOLIhttp://www.uniprot.org/uniprot/FLGD_ECOLI
chargeswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:FLGD_ECOLI
eggNOGCOG1843http://eggnogapi.embl.de/nog_data/html/tree/COG1843
eggNOGENOG4105W00http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105W00
epestfindswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:FLGD_ECOLI
garnierswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:FLGD_ECOLI
helixturnhelixswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:FLGD_ECOLI
hmomentswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:FLGD_ECOLI
iepswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:FLGD_ECOLI
inforesidueswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:FLGD_ECOLI
octanolswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:FLGD_ECOLI
pepcoilswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:FLGD_ECOLI
pepdigestswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:FLGD_ECOLI
pepinfoswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:FLGD_ECOLI
pepnetswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:FLGD_ECOLI
pepstatsswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:FLGD_ECOLI
pepwheelswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:FLGD_ECOLI
pepwindowswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:FLGD_ECOLI
sigcleaveswissprot:FLGD_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:FLGD_ECOLI
DataBaseIDURL or Descriptions
# AltNameSUFS_ECOLISelenocysteine beta-lyase
# AltNameSUFS_ECOLISelenocysteine lyase
# AltNameSUFS_ECOLISelenocysteine reductase
# BRENDA2.8.12026
# BRENDA4.4.1.162026
# BioGrid426028157
# CATALYTIC ACTIVITYSUFS_ECOLIL-cysteine + acceptor = L-alanine + S- sulfanyl-acceptor.
# CATALYTIC ACTIVITYSUFS_ECOLIL-selenocysteine + reduced acceptor = selenide + L-alanine + acceptor.
# COFACTORName=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI597326;
# ENZYME REGULATIONSUFS_ECOLIDisplays a strong preference for selenocysteine as a substrate in vitro and is only very sightly active using cysteine. The interactions with SufE and the SufBCD complex act synergistically to enhance, up to 50-fold, its cysteine desulfurase activity. {ECO 0000269|PubMed 12876288, ECO 0000269|PubMed 12941942, ECO 0000269|PubMed 14644425}.
# EcoGeneEG13962sufS
# FUNCTIONSUFS_ECOLICysteine desulfurases mobilize the sulfur from L- cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L-selenocysteine. Selenocysteine lyase activity is however unsure in vivo. {ECO 0000269|PubMed 10829016, ECO 0000269|PubMed 11997471, ECO 0000269|PubMed 12089140, ECO 0000269|PubMed 12876288, ECO 0000269|PubMed 12941942}.
# GO_componentGO:0005737cytoplasm; IEA:UniProtKB-SubCell.
# GO_functionGO:0009000selenocysteine lyase activity; IDA:EcoCyc.
# GO_functionGO:0030170pyridoxal phosphate binding; IDA:EcoCyc.
# GO_functionGO:0031071cysteine desulfurase activity; IDA:EcoCyc.
# GO_processGO:0001887selenium compound metabolic process; IGI:EcoCyc.
# GO_processGO:0006534cysteine metabolic process; IEA:InterPro.
# GO_processGO:0006790sulfur compound metabolic process; IDA:EcoCyc.
# GO_processGO:0016226iron-sulfur cluster assembly; IDA:EcoCyc.
# GO_processGO:0031162sulfur incorporation into metallo-sulfur cluster; IDA:EcoCyc.
# GOslim_componentGO:0005737cytoplasm
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0016829lyase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006464cellular protein modification process
# GOslim_processGO:0006520cellular amino acid metabolic process
# GOslim_processGO:0006790sulfur compound metabolic process
# GOslim_processGO:0008150biological_process
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0022607cellular component assembly
# GOslim_processGO:0051186cofactor metabolic process
# Gene3D3.40.640.10-; 1.
# Gene3D3.90.1150.10-; 1.
# HAMAPMF_01831SufS_aminotrans_5
# INDUCTIONSUFS_ECOLISuf operon is under both the Fe-dependent Fur repressor and the oxidative stress dependent OxyR activator.
# INTERACTIONSUFS_ECOLIP76194 sufE; NbExp=3; IntAct=EBI-1124981, EBI-1124973;
# IntActP7744414
# InterProIPR000192Aminotrans_V_dom
# InterProIPR010970Cys_dSase_SufS
# InterProIPR015421PyrdxlP-dep_Trfase_major_sub1
# InterProIPR015422PyrdxlP-dep_Trfase_major_sub2
# InterProIPR015424PyrdxlP-dep_Trfase
# InterProIPR020578Aminotrans_V_PyrdxlP_BS
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00450Selenocompound metabolism
# KEGG_Pathwayko00730Thiamine metabolism
# OrganismSUFS_ECOLIEscherichia coli (strain K12)
# PATHWAYSUFS_ECOLICofactor biosynthesis; iron-sulfur cluster biosynthesis.
# PATRIC32118666VBIEscCol129921_1751
# PDB1C0NX-ray; 2.80 A; A=1-406
# PDB1I29X-ray; 2.80 A; A=1-406
# PDB1JF9X-ray; 2.00 A; A=1-406
# PDB1KMJX-ray; 2.00 A; A=1-406
# PDB1KMKX-ray; 2.20 A; A=1-406
# PDB5DB5X-ray; 2.75 A; A/B=1-406
# PIRH64925H64925
# PROSITEPS00595AA_TRANSFER_CLASS_5
# PfamPF00266Aminotran_5
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameSUFS_ECOLICysteine desulfurase
# RefSeqNP_416195NC_000913.3
# RefSeqWP_000577988NZ_LN832404.1
# SIMILARITYBelongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily. {ECO0000305}.
# SUBCELLULAR LOCATIONSUFS_ECOLICytoplasm {ECO 0000250}.
# SUBUNITSUFS_ECOLIHomodimer. Interacts with SufE and the SufBCD complex composed of SufB, SufC and SufD. The interaction with SufE is required to mediate the direct transfer of the sulfur atom from the S-sulfanylcysteine. {ECO 0000269|PubMed 11827487, ECO 0000269|PubMed 12876288, ECO 0000269|PubMed 12941942, ECO 0000269|PubMed 14644425}.
# SUPFAMSSF53383SSF53383
# TIGRFAMsTIGR01979sufS
# eggNOGCOG0520LUCA
# eggNOGENOG4105C9BBacteria
BLASTswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:SUFS_ECOLI
BioCycECOL316407:JW1670-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1670-MONOMER
BioCycEcoCyc:G6906-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6906-MONOMER
BioCycMetaCyc:G6906-MONOMERhttp://biocyc.org/getid?id=MetaCyc:G6906-MONOMER
COGCOG0520http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0520
DIPDIP-9324Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9324N
DOI10.1006/jmbi.2001.5308http://dx.doi.org/10.1006/jmbi.2001.5308
DOI10.1016/S0014-5793(03)01244-4http://dx.doi.org/10.1016/S0014-5793(03)01244-4
DOI10.1021/bi991732ahttp://dx.doi.org/10.1021/bi991732a
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.102176099http://dx.doi.org/10.1073/pnas.102176099
DOI10.1074/jbc.274.21.14768http://dx.doi.org/10.1074/jbc.274.21.14768
DOI10.1074/jbc.C200365200http://dx.doi.org/10.1074/jbc.C200365200
DOI10.1074/jbc.M000926200http://dx.doi.org/10.1074/jbc.M000926200
DOI10.1074/jbc.M305953200http://dx.doi.org/10.1074/jbc.M305953200
DOI10.1074/jbc.M308004200http://dx.doi.org/10.1074/jbc.M308004200
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1093/oxfordjournals.jbchem.a003151http://dx.doi.org/10.1093/oxfordjournals.jbchem.a003151
DOI10.1093/oxfordjournals.jbchem.a022641http://dx.doi.org/10.1093/oxfordjournals.jbchem.a022641
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:2.8.1.7http://www.genome.jp/dbget-bin/www_bget?EC:2.8.1.7
EC_numberEC:4.4.1.16http://www.genome.jp/dbget-bin/www_bget?EC:4.4.1.16
EMBLAB055108http://www.ebi.ac.uk/ena/data/view/AB055108
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
ENZYME2.8.1.7http://enzyme.expasy.org/EC/2.8.1.7
ENZYME4.4.1.16http://enzyme.expasy.org/EC/4.4.1.16
EchoBASEEB3720http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3720
EcoGeneEG13962http://www.ecogene.org/geneInfo.php?eg_id=EG13962
EnsemblBacteriaAAC74750http://www.ensemblgenomes.org/id/AAC74750
EnsemblBacteriaAAC74750http://www.ensemblgenomes.org/id/AAC74750
EnsemblBacteriaBAA15457http://www.ensemblgenomes.org/id/BAA15457
EnsemblBacteriaBAA15457http://www.ensemblgenomes.org/id/BAA15457
EnsemblBacteriaBAA15457http://www.ensemblgenomes.org/id/BAA15457
EnsemblBacteriab1680http://www.ensemblgenomes.org/id/b1680
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GO_functionGO:0009000http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009000
GO_functionGO:0030170http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030170
GO_functionGO:0031071http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0031071
GO_processGO:0001887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0001887
GO_processGO:0006534http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006534
GO_processGO:0006790http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006790
GO_processGO:0016226http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016226
GO_processGO:0031162http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0031162
GOslim_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0016829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016829
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006464http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006464
GOslim_processGO:0006520http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006520
GOslim_processGO:0006790http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006790
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0022607http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022607
GOslim_processGO:0051186http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0051186
Gene3D3.40.640.10http://www.cathdb.info/version/latest/superfamily/3.40.640.10
Gene3D3.90.1150.10http://www.cathdb.info/version/latest/superfamily/3.90.1150.10
GeneID946185http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946185
HAMAPMF_01831http://hamap.expasy.org/unirule/MF_01831
HOGENOMHOG000017511http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000017511&db=HOGENOM6
InParanoidP77444http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P77444
IntActP77444http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P77444*
IntEnz2.8.1.7http://www.ebi.ac.uk/intenz/query?cmd=Search&q=2.8.1.7
IntEnz4.4.1.16http://www.ebi.ac.uk/intenz/query?cmd=Search&q=4.4.1.16
InterProIPR000192http://www.ebi.ac.uk/interpro/entry/IPR000192
InterProIPR010970http://www.ebi.ac.uk/interpro/entry/IPR010970
InterProIPR015421http://www.ebi.ac.uk/interpro/entry/IPR015421
InterProIPR015422http://www.ebi.ac.uk/interpro/entry/IPR015422
InterProIPR015424http://www.ebi.ac.uk/interpro/entry/IPR015424
InterProIPR020578http://www.ebi.ac.uk/interpro/entry/IPR020578
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW1670http://www.genome.jp/dbget-bin/www_bget?ecj:JW1670
KEGG_Geneeco:b1680http://www.genome.jp/dbget-bin/www_bget?eco:b1680
KEGG_OrthologyKO:K11717http://www.genome.jp/dbget-bin/www_bget?KO:K11717
KEGG_Pathwayko00450http://www.genome.jp/kegg-bin/show_pathway?ko00450
KEGG_Pathwayko00730http://www.genome.jp/kegg-bin/show_pathway?ko00730
KEGG_Reactionrn:R03599http://www.genome.jp/dbget-bin/www_bget?rn:R03599
KEGG_Reactionrn:R09366http://www.genome.jp/dbget-bin/www_bget?rn:R09366
OMAAEKVHGKhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=AEKVHGK
PDB1C0Nhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1C0N
PDB1I29http://www.ebi.ac.uk/pdbe-srv/view/entry/1I29
PDB1JF9http://www.ebi.ac.uk/pdbe-srv/view/entry/1JF9
PDB1KMJhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1KMJ
PDB1KMKhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1KMK
PDB5DB5http://www.ebi.ac.uk/pdbe-srv/view/entry/5DB5
PDBsum1C0Nhttp://www.ebi.ac.uk/pdbsum/1C0N
PDBsum1I29http://www.ebi.ac.uk/pdbsum/1I29
PDBsum1JF9http://www.ebi.ac.uk/pdbsum/1JF9
PDBsum1KMJhttp://www.ebi.ac.uk/pdbsum/1KMJ
PDBsum1KMKhttp://www.ebi.ac.uk/pdbsum/1KMK
PDBsum5DB5http://www.ebi.ac.uk/pdbsum/5DB5
PROSITEPS00595http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00595
PSORT-Bswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:SUFS_ECOLI
PSORT2swissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:SUFS_ECOLI
PSORTswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:SUFS_ECOLI
PfamPF00266http://pfam.xfam.org/family/PF00266
Phobiusswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:SUFS_ECOLI
PhylomeDBP77444http://phylomedb.org/?seqid=P77444
ProteinModelPortalP77444http://www.proteinmodelportal.org/query/uniprot/P77444
PubMed10322040http://www.ncbi.nlm.nih.gov/pubmed/10322040
PubMed10329673http://www.ncbi.nlm.nih.gov/pubmed/10329673
PubMed10684605http://www.ncbi.nlm.nih.gov/pubmed/10684605
PubMed10739946http://www.ncbi.nlm.nih.gov/pubmed/10739946
PubMed10829016http://www.ncbi.nlm.nih.gov/pubmed/10829016
PubMed11827487http://www.ncbi.nlm.nih.gov/pubmed/11827487
PubMed11983074http://www.ncbi.nlm.nih.gov/pubmed/11983074
PubMed11997471http://www.ncbi.nlm.nih.gov/pubmed/11997471
PubMed12089140http://www.ncbi.nlm.nih.gov/pubmed/12089140
PubMed12876288http://www.ncbi.nlm.nih.gov/pubmed/12876288
PubMed12941942http://www.ncbi.nlm.nih.gov/pubmed/12941942
PubMed14644425http://www.ncbi.nlm.nih.gov/pubmed/14644425
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416195http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416195
RefSeqWP_000577988http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000577988
SMRP77444http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P77444
STRING511145.b1680http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1680&targetmode=cogs
STRINGCOG0520http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0520&targetmode=cogs
SUPFAMSSF53383http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF53383
TIGRFAMsTIGR01979http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR01979
UniProtKB-ACP77444http://www.uniprot.org/uniprot/P77444
UniProtKBSUFS_ECOLIhttp://www.uniprot.org/uniprot/SUFS_ECOLI
chargeswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:SUFS_ECOLI
eggNOGCOG0520http://eggnogapi.embl.de/nog_data/html/tree/COG0520
eggNOGENOG4105C9Bhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105C9B
epestfindswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:SUFS_ECOLI
garnierswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:SUFS_ECOLI
helixturnhelixswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:SUFS_ECOLI
hmomentswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:SUFS_ECOLI
iepswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:SUFS_ECOLI
inforesidueswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:SUFS_ECOLI
octanolswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:SUFS_ECOLI
pepcoilswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:SUFS_ECOLI
pepdigestswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:SUFS_ECOLI
pepinfoswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:SUFS_ECOLI
pepnetswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:SUFS_ECOLI
pepstatsswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:SUFS_ECOLI
pepwheelswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:SUFS_ECOLI
pepwindowswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:SUFS_ECOLI
sigcleaveswissprot:SUFS_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:SUFS_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426113016
# CDDcd01392HTH_LacI
# EcoGeneEG10557malI
# FUNCTIONMALI_ECOLIRepressor for the malX and malY genes. Also regulates its own expression. Binds maltose as an inducer. {ECO 0000269|PubMed 1856179}.
# GO_functionGO:0003677DNA binding; IEA:UniProtKB-KW.
# GO_processGO:0006351transcription, DNA-templated; IEA:UniProtKB-KW.
# GO_processGO:0045892negative regulation of transcription, DNA-templated; IMP:EcoCyc.
# GOslim_functionGO:0003677DNA binding
# GOslim_processGO:0008150biological_process
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# Gene3D1.10.260.40-; 1.
# IntActP188116
# InterProIPR000843HTH_LacI
# InterProIPR001761Peripla_BP/Lac1_sug-bd_dom
# InterProIPR010982Lambda_DNA-bd_dom
# InterProIPR028082Peripla_BP_I
# KEGG_Briteko03000Transcription factors
# OrganismMALI_ECOLIEscherichia coli (strain K12)
# PATRIC32118542VBIEscCol129921_1691
# PIRF64918RPECML
# PROSITEPS00356HTH_LACI_1
# PROSITEPS50932HTH_LACI_2
# PfamPF00356LacI
# PfamPF00532Peripla_BP_1
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameMALI_ECOLIMaltose regulon regulatory protein MalI
# RefSeqNP_416137NC_000913.3
# RefSeqWP_000179510NZ_LN832404.1
# SIMILARITYContains 1 HTH lacI-type DNA-binding domain. {ECO:0000255|PROSITE-ProRulePRU00111}.
# SMARTSM00354HTH_LACI
# SUPFAMSSF47413SSF47413
# SUPFAMSSF53822SSF53822
# eggNOGCOG1609LUCA
# eggNOGENOG4107P2SBacteria
BLASTswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:MALI_ECOLI
BioCycECOL316407:JW1612-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1612-MONOMER
BioCycEcoCyc:PD00361http://biocyc.org/getid?id=EcoCyc:PD00361
COGCOG1609http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1609
DIPDIP-10143Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-10143N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM28539http://www.ebi.ac.uk/ena/data/view/M28539
EMBLM60722http://www.ebi.ac.uk/ena/data/view/M60722
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB0552http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0552
EcoGeneEG10557http://www.ecogene.org/geneInfo.php?eg_id=EG10557
EnsemblBacteriaAAC74692http://www.ensemblgenomes.org/id/AAC74692
EnsemblBacteriaAAC74692http://www.ensemblgenomes.org/id/AAC74692
EnsemblBacteriaBAA15371http://www.ensemblgenomes.org/id/BAA15371
EnsemblBacteriaBAA15371http://www.ensemblgenomes.org/id/BAA15371
EnsemblBacteriaBAA15371http://www.ensemblgenomes.org/id/BAA15371
EnsemblBacteriab1620http://www.ensemblgenomes.org/id/b1620
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GO_processGO:0006351http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006351
GO_processGO:0045892http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0045892
GOslim_functionGO:0003677http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003677
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
Gene3D1.10.260.40http://www.cathdb.info/version/latest/superfamily/1.10.260.40
GeneID947104http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947104
HOGENOMHOG000220179http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000220179&db=HOGENOM6
InParanoidP18811http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P18811
IntActP18811http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P18811*
InterProIPR000843http://www.ebi.ac.uk/interpro/entry/IPR000843
InterProIPR001761http://www.ebi.ac.uk/interpro/entry/IPR001761
InterProIPR010982http://www.ebi.ac.uk/interpro/entry/IPR010982
InterProIPR028082http://www.ebi.ac.uk/interpro/entry/IPR028082
KEGG_Briteko03000http://www.genome.jp/dbget-bin/www_bget?ko03000
KEGG_Geneecj:JW1612http://www.genome.jp/dbget-bin/www_bget?ecj:JW1612
KEGG_Geneeco:b1620http://www.genome.jp/dbget-bin/www_bget?eco:b1620
KEGG_OrthologyKO:K16136http://www.genome.jp/dbget-bin/www_bget?KO:K16136
OMAWVLECAShttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=WVLECAS
PROSITEPS00356http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00356
PROSITEPS50932http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50932
PSORT-Bswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:MALI_ECOLI
PSORT2swissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:MALI_ECOLI
PSORTswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:MALI_ECOLI
PfamPF00356http://pfam.xfam.org/family/PF00356
PfamPF00532http://pfam.xfam.org/family/PF00532
Phobiusswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:MALI_ECOLI
PhylomeDBP18811http://phylomedb.org/?seqid=P18811
ProteinModelPortalP18811http://www.proteinmodelportal.org/query/uniprot/P18811
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed1856179http://www.ncbi.nlm.nih.gov/pubmed/1856179
PubMed2670898http://www.ncbi.nlm.nih.gov/pubmed/2670898
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416137http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416137
RefSeqWP_000179510http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000179510
SMARTSM00354http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00354
SMRP18811http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P18811
STRING511145.b1620http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1620&targetmode=cogs
STRINGCOG1609http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1609&targetmode=cogs
SUPFAMSSF47413http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF47413
SUPFAMSSF53822http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF53822
UniProtKB-ACP18811http://www.uniprot.org/uniprot/P18811
UniProtKBMALI_ECOLIhttp://www.uniprot.org/uniprot/MALI_ECOLI
chargeswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:MALI_ECOLI
eggNOGCOG1609http://eggnogapi.embl.de/nog_data/html/tree/COG1609
eggNOGENOG4107P2Shttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4107P2S
epestfindswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:MALI_ECOLI
garnierswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:MALI_ECOLI
helixturnhelixswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:MALI_ECOLI
hmomentswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:MALI_ECOLI
iepswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:MALI_ECOLI
inforesidueswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:MALI_ECOLI
octanolswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:MALI_ECOLI
pepcoilswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:MALI_ECOLI
pepdigestswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:MALI_ECOLI
pepinfoswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:MALI_ECOLI
pepnetswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:MALI_ECOLI
pepstatsswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:MALI_ECOLI
pepwheelswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:MALI_ECOLI
pepwindowswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:MALI_ECOLI
sigcleaveswissprot:MALI_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:MALI_ECOLI
DataBaseIDURL or Descriptions
# BioGrid4263000209
# EcoGeneEG11124ompW
# FUNCTIONOMPW_ECOLIActs as a receptor for colicin S4. {ECO 0000269|PubMed 10348872}.
# GO_componentGO:0009279cell outer membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GOslim_componentGO:0005575cellular_component
# Gene3D2.40.160.20-; 1.
# INTERACTIONOMPW_ECOLIP0AC47 frdB; NbExp=2; IntAct=EBI-1132929, EBI-906724;
# IntActP0A9155
# InterProIPR005618OMPW
# InterProIPR011250OMP/PagP_b-brl
# OrganismOMPW_ECOLIEscherichia coli (strain K12)
# PATRIC32117772VBIEscCol129921_1306
# PDB2F1TX-ray; 3.00 A; A/B/C=22-212
# PDB2F1VX-ray; 2.70 A; A/B/C/D/E/F=22-212
# PIRS07797S07797
# PIRT45501T45501
# PfamPF03922OmpW
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameOMPW_ECOLIOuter membrane protein W
# RefSeqNP_415772NC_000913.3
# RefSeqWP_000737226NZ_LN832404.1
# SIMILARITYBelongs to the OmpW/AlkL family. {ECO0000305}.
# SUBCELLULAR LOCATIONOMPW_ECOLICell outer membrane.
# SUPFAMSSF56925SSF56925
# TCDB1.B.39.1the bacterial porin, ompw (ompw) family
# eggNOGCOG3047LUCA
# eggNOGENOG4105EIFBacteria
BLASTswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:OMPW_ECOLI
BioCycECOL316407:JW1248-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1248-MONOMER
BioCycEcoCyc:EG11124-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11124-MONOMER
COGCOG3047http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3047
DOI10.1002/elps.1150190539http://dx.doi.org/10.1002/elps.1150190539
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU24195http://www.ebi.ac.uk/ena/data/view/U24195
EMBLU24196http://www.ebi.ac.uk/ena/data/view/U24196
EMBLU24197http://www.ebi.ac.uk/ena/data/view/U24197
EMBLU24198http://www.ebi.ac.uk/ena/data/view/U24198
EMBLU24199http://www.ebi.ac.uk/ena/data/view/U24199
EMBLU24200http://www.ebi.ac.uk/ena/data/view/U24200
EMBLU24201http://www.ebi.ac.uk/ena/data/view/U24201
EMBLU24202http://www.ebi.ac.uk/ena/data/view/U24202
EMBLU24203http://www.ebi.ac.uk/ena/data/view/U24203
EMBLU24204http://www.ebi.ac.uk/ena/data/view/U24204
EMBLU24205http://www.ebi.ac.uk/ena/data/view/U24205
EMBLU24206http://www.ebi.ac.uk/ena/data/view/U24206
EMBLX13583http://www.ebi.ac.uk/ena/data/view/X13583
EchoBASEEB1114http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1114
EcoGeneEG11124http://www.ecogene.org/geneInfo.php?eg_id=EG11124
EnsemblBacteriaAAC74338http://www.ensemblgenomes.org/id/AAC74338
EnsemblBacteriaAAC74338http://www.ensemblgenomes.org/id/AAC74338
EnsemblBacteriaBAA14788http://www.ensemblgenomes.org/id/BAA14788
EnsemblBacteriaBAA14788http://www.ensemblgenomes.org/id/BAA14788
EnsemblBacteriaBAA14788http://www.ensemblgenomes.org/id/BAA14788
EnsemblBacteriab1256http://www.ensemblgenomes.org/id/b1256
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0009279http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009279
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
Gene3D2.40.160.20http://www.cathdb.info/version/latest/superfamily/2.40.160.20
GeneID945128http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945128
HOGENOMHOG000217796http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000217796&db=HOGENOM6
InParanoidP0A915http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0A915
IntActP0A915http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0A915*
InterProIPR005618http://www.ebi.ac.uk/interpro/entry/IPR005618
InterProIPR011250http://www.ebi.ac.uk/interpro/entry/IPR011250
KEGG_Geneecj:JW1248http://www.genome.jp/dbget-bin/www_bget?ecj:JW1248
KEGG_Geneeco:b1256http://www.genome.jp/dbget-bin/www_bget?eco:b1256
KEGG_OrthologyKO:K07275http://www.genome.jp/dbget-bin/www_bget?KO:K07275
OMADYMLTDNhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=DYMLTDN
PDB2F1Thttp://www.ebi.ac.uk/pdbe-srv/view/entry/2F1T
PDB2F1Vhttp://www.ebi.ac.uk/pdbe-srv/view/entry/2F1V
PDBsum2F1Thttp://www.ebi.ac.uk/pdbsum/2F1T
PDBsum2F1Vhttp://www.ebi.ac.uk/pdbsum/2F1V
PSORT-Bswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:OMPW_ECOLI
PSORT2swissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:OMPW_ECOLI
PSORTswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:OMPW_ECOLI
PfamPF03922http://pfam.xfam.org/family/PF03922
Phobiusswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:OMPW_ECOLI
PhylomeDBP0A915http://phylomedb.org/?seqid=P0A915
ProteinModelPortalP0A915http://www.proteinmodelportal.org/query/uniprot/P0A915
PubMed10348872http://www.ncbi.nlm.nih.gov/pubmed/10348872
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed3058546http://www.ncbi.nlm.nih.gov/pubmed/3058546
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9629924http://www.ncbi.nlm.nih.gov/pubmed/9629924
RefSeqNP_415772http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415772
RefSeqWP_000737226http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000737226
SMRP0A915http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0A915
STRING511145.b1256http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1256&targetmode=cogs
STRINGCOG3047http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG3047&targetmode=cogs
SUPFAMSSF56925http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF56925
TCDB1.B.39.1http://www.tcdb.org/search/result.php?tc=1.B.39.1
UniProtKB-ACP0A915http://www.uniprot.org/uniprot/P0A915
UniProtKBOMPW_ECOLIhttp://www.uniprot.org/uniprot/OMPW_ECOLI
chargeswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:OMPW_ECOLI
eggNOGCOG3047http://eggnogapi.embl.de/nog_data/html/tree/COG3047
eggNOGENOG4105EIFhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105EIF
epestfindswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:OMPW_ECOLI
garnierswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:OMPW_ECOLI
helixturnhelixswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:OMPW_ECOLI
hmomentswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:OMPW_ECOLI
iepswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:OMPW_ECOLI
inforesidueswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:OMPW_ECOLI
octanolswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:OMPW_ECOLI
pepcoilswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:OMPW_ECOLI
pepdigestswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:OMPW_ECOLI
pepinfoswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:OMPW_ECOLI
pepnetswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:OMPW_ECOLI
pepstatsswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:OMPW_ECOLI
pepwheelswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:OMPW_ECOLI
pepwindowswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:OMPW_ECOLI
sigcleaveswissprot:OMPW_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:OMPW_ECOLI
DataBaseIDURL or Descriptions
# BRENDA5.4.99.622026
# BioGrid42612367
# CATALYTIC ACTIVITYBeta-D-allopyranose = beta-D-allofuranose. {ECO:0000269|PubMed15060078}.
# CATALYTIC ACTIVITYBeta-D-ribopyranose = beta-D-ribofuranose. {ECO:0000269|PubMed15060078}.
# CAUTIONRBSD_ECOLIWas originally thought (PubMed 3011793) to be a high affinity ribose transport protein, but further analysis (PubMed 15060078) shows that it is a D-ribose pyranase. {ECO 0000305|PubMed 15060078, ECO 0000305|PubMed 3011793}.
# EcoGeneEG10817rbsD
# FUNCTIONRBSD_ECOLICatalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose. It also catalyzes the conversion between beta-allofuranose and beta-allopyranose. {ECO 0000269|PubMed 15060078}.
# GO_componentGO:0005829cytosol; IDA:EcoCyc.
# GO_functionGO:0016866intramolecular transferase activity; IDA:EcoCyc.
# GO_functionGO:0016872intramolecular lyase activity; IEA:UniProtKB-HAMAP.
# GO_functionGO:0042802identical protein binding; IDA:EcoCyc.
# GO_functionGO:0048029monosaccharide binding; IEA:InterPro.
# GO_processGO:0019303D-ribose catabolic process; IMP:EcoCyc.
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0016853isomerase activity
# GOslim_processGO:0005975carbohydrate metabolic process
# GOslim_processGO:0009056catabolic process
# GOslim_processGO:0044281small molecule metabolic process
# Gene3D3.40.1650.10-; 1.
# HAMAPMF_01661D_rib_pyranase
# InterProIPR007721RbsD_FucU
# InterProIPR023064D-ribose_pyranase
# InterProIPR023750RbsD-like
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko02010ABC transporters
# OrganismRBSD_ECOLIEscherichia coli (strain K12)
# PATHWAYCarbohydrate metabolism; D-ribose degradation; D-ribose 5-phosphate from beta-D-ribopyranose step 1/2.
# PATRIC32122995VBIEscCol129921_3873
# PIRE65178E65178
# PfamPF05025RbsD_FucU
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameRBSD_ECOLID-ribose pyranase
# RefSeqNP_418204NC_000913.3
# RefSeqWP_001301979NZ_LN832404.1
# SEQUENCE CAUTIONSequence=AAA62101.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO0000305};
# SIMILARITYBelongs to the RbsD / FucU family. RbsD subfamily. {ECO0000305}.
# SUBCELLULAR LOCATIONRBSD_ECOLICytoplasm {ECO 0000305}.
# SUBUNITRBSD_ECOLIHomodecamer. {ECO 0000269|PubMed 12738765, ECO 0000269|PubMed 16731978}.
# SUPFAMSSF102546SSF102546
# UniPathwayUPA00916UER00888
# eggNOGCOG1869LUCA
# eggNOGENOG4105MRBBacteria
BLASTswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:RBSD_ECOLI
BioCycECOL316407:JW5857-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW5857-MONOMER
BioCycEcoCyc:EG10817-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG10817-MONOMER
BioCycMetaCyc:EG10817-MONOMERhttp://biocyc.org/getid?id=MetaCyc:EG10817-MONOMER
COGCOG1869http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1869
DOI10.1006/geno.1993.1230http://dx.doi.org/10.1006/geno.1993.1230
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1074/jbc.M304523200http://dx.doi.org/10.1074/jbc.M304523200
DOI10.1074/jbc.M402016200http://dx.doi.org/10.1074/jbc.M402016200
DOI10.1107/S0907444901003109http://dx.doi.org/10.1107/S0907444901003109
DOI10.1110/ps.062175806http://dx.doi.org/10.1110/ps.062175806
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1266/ggs.82.291http://dx.doi.org/10.1266/ggs.82.291
EC_numberEC:5.4.99.62 {ECO:0000269|PubMed:15060078}http://www.genome.jp/dbget-bin/www_bget?EC:5.4.99.62 {ECO:0000269|PubMed:15060078}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLL10328http://www.ebi.ac.uk/ena/data/view/L10328
EMBLM13169http://www.ebi.ac.uk/ena/data/view/M13169
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX68551http://www.ebi.ac.uk/ena/data/view/X68551
ENZYME5.4.99.62 {ECO:0000269|PubMed:15060078}http://enzyme.expasy.org/EC/5.4.99.62 {ECO:0000269|PubMed:15060078}
EchoBASEEB0810http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0810
EcoGeneEG10817http://www.ecogene.org/geneInfo.php?eg_id=EG10817
EnsemblBacteriaAAC76771http://www.ensemblgenomes.org/id/AAC76771
EnsemblBacteriaAAC76771http://www.ensemblgenomes.org/id/AAC76771
EnsemblBacteriaBAE77540http://www.ensemblgenomes.org/id/BAE77540
EnsemblBacteriaBAE77540http://www.ensemblgenomes.org/id/BAE77540
EnsemblBacteriaBAE77540http://www.ensemblgenomes.org/id/BAE77540
EnsemblBacteriab3748http://www.ensemblgenomes.org/id/b3748
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_functionGO:0016866http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016866
GO_functionGO:0016872http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016872
GO_functionGO:0042802http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042802
GO_functionGO:0048029http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0048029
GO_processGO:0019303http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0019303
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0016853http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016853
GOslim_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GOslim_processGO:0009056http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009056
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
Gene3D3.40.1650.10http://www.cathdb.info/version/latest/superfamily/3.40.1650.10
GeneID948267http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=948267
HAMAPMF_01661http://hamap.expasy.org/unirule/MF_01661
HOGENOMHOG000219040http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000219040&db=HOGENOM6
InParanoidP04982http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P04982
IntEnz5.4.99.62 {ECO:0000269|PubMed:15060078}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=5.4.99.62 {ECO:0000269|PubMed:15060078}
InterProIPR007721http://www.ebi.ac.uk/interpro/entry/IPR007721
InterProIPR023064http://www.ebi.ac.uk/interpro/entry/IPR023064
InterProIPR023750http://www.ebi.ac.uk/interpro/entry/IPR023750
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW5857http://www.genome.jp/dbget-bin/www_bget?ecj:JW5857
KEGG_Geneeco:b3748http://www.genome.jp/dbget-bin/www_bget?eco:b3748
KEGG_OrthologyKO:K06726http://www.genome.jp/dbget-bin/www_bget?KO:K06726
KEGG_Pathwayko02010http://www.genome.jp/kegg-bin/show_pathway?ko02010
KEGG_Reactionrn:R08247http://www.genome.jp/dbget-bin/www_bget?rn:R08247
OMAIIRTGEChttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=IIRTGEC
PSORT-Bswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:RBSD_ECOLI
PSORT2swissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:RBSD_ECOLI
PSORTswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:RBSD_ECOLI
PfamPF05025http://pfam.xfam.org/family/PF05025
Phobiusswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:RBSD_ECOLI
PhylomeDBP04982http://phylomedb.org/?seqid=P04982
ProteinModelPortalP04982http://www.proteinmodelportal.org/query/uniprot/P04982
PubMed11320319http://www.ncbi.nlm.nih.gov/pubmed/11320319
PubMed12738765http://www.ncbi.nlm.nih.gov/pubmed/12738765
PubMed15060078http://www.ncbi.nlm.nih.gov/pubmed/15060078
PubMed16731978http://www.ncbi.nlm.nih.gov/pubmed/16731978
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed17895580http://www.ncbi.nlm.nih.gov/pubmed/17895580
PubMed3011793http://www.ncbi.nlm.nih.gov/pubmed/3011793
PubMed7686882http://www.ncbi.nlm.nih.gov/pubmed/7686882
PubMed8226635http://www.ncbi.nlm.nih.gov/pubmed/8226635
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_418204http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_418204
RefSeqWP_001301979http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001301979
SMRP04982http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P04982
STRING511145.b3748http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3748&targetmode=cogs
STRINGCOG1869http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1869&targetmode=cogs
SUPFAMSSF102546http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF102546
UniProtKB-ACP04982http://www.uniprot.org/uniprot/P04982
UniProtKBRBSD_ECOLIhttp://www.uniprot.org/uniprot/RBSD_ECOLI
chargeswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:RBSD_ECOLI
eggNOGCOG1869http://eggnogapi.embl.de/nog_data/html/tree/COG1869
eggNOGENOG4105MRBhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105MRB
epestfindswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:RBSD_ECOLI
garnierswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:RBSD_ECOLI
helixturnhelixswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:RBSD_ECOLI
hmomentswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:RBSD_ECOLI
iepswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:RBSD_ECOLI
inforesidueswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:RBSD_ECOLI
octanolswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:RBSD_ECOLI
pepcoilswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:RBSD_ECOLI
pepdigestswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:RBSD_ECOLI
pepinfoswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:RBSD_ECOLI
pepnetswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:RBSD_ECOLI
pepstatsswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:RBSD_ECOLI
pepwheelswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:RBSD_ECOLI
pepwindowswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:RBSD_ECOLI
sigcleaveswissprot:RBSD_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:RBSD_ECOLI
DataBaseIDURL or Descriptions
# BRENDA3.1.1.582026
# BioGrid4263226121
# DISRUPTION PHENOTYPEPGAA_ECOLIDeletion of pgaA does not prevent PGA synthesis but does block its export. The synthesized PGA is retained in the periplasm and accumulates at the cell poles. Disruption of the pga operon causes severe and persistent defects in the biofilm formation process. {ECO 0000269|PubMed 15090514, ECO 0000269|PubMed 18359807}.
# DOMAINPGAA_ECOLIContains a predicted C-terminal beta-barrel porin domain and a N-terminal periplasmic superhelical domain containing tetratricopeptide repeats, which may mediate protein-protein interactions, perhaps with PgaB. {ECO 0000269|PubMed 18359807}.
# EcoGeneEG13865pgaA
# FUNCTIONPGAA_ECOLIExports the biofilm adhesin polysaccharide poly-beta- 1,6-N-acetyl-D-glucosamine (PGA) across the outer membrane. The PGA transported seems to be partially N-deacetylated since N- deacetylation of PGA by PgaB is needed for PGA export through the PgaA porin.
# FUNCTIONPGAA_ECOLIRequired for the synthesis of the beta-1,6-GlcNAc polysaccharide (PGA or poly-GlcNAc) that seems to serve as a biofilm adhesin.
# GO_componentGO:0009279cell outer membrane; IEA:UniProtKB-SubCell.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0022891substrate-specific transmembrane transporter activity; IMP:EcoCyc.
# GO_processGO:0006810transport; IMP:EcoCyc.
# GO_processGO:0044010single-species biofilm formation; IMP:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# GOslim_processGO:0008150biological_process
# Gene3D1.25.40.10-; 2.
# INDUCTIONLevels of this protein are negatively controlled by the second messenger ppGpp (at protein level) at a post- transcriptional level. Increased levels of c-di-GMP lead to decreased levels of PgaA. {ECO:0000269|PubMed19460094}.
# InterProIPR011990TPR-like_helical_dom
# InterProIPR013026TPR-contain_dom
# InterProIPR019734TPR_repeat
# InterProIPR023870PGA_export_porin_PgaA
# OrganismPGAA_ECOLIEscherichia coli (strain K12)
# PATRIC32117281VBIEscCol129921_1064
# PDB4Y25X-ray; 2.82 A; A=511-807
# PIRF64844F64844
# PROSITEPS50005TPR
# PROSITEPS50293TPR_REGION
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNamePGAA_ECOLIPoly-beta-1,6-N-acetyl-D-glucosamine export protein
# RefSeqNP_415543NC_000913.3
# RefSeqWP_000287458NZ_LN832404.1
# SIMILARITYContains 3 TPR repeats. {ECO:0000255|PROSITE- ProRulePRU00339}.
# SMARTSM00028TPR
# SUBCELLULAR LOCATIONPGAA_ECOLICell outer membrane {ECO 0000305|PubMed 18359807}; Multi-pass membrane protein {ECO 0000305|PubMed 18359807}.
# SUPFAMSSF48452SSF48452; 2
# TCDB1.B.55.1the poly acetyl glucosamine porin (pgaa) family
# TIGRFAMsTIGR03939PGA_TPR_OMP
# eggNOGENOG4108TUYBacteria
# eggNOGENOG4111HEPLUCA
BLASTswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:PGAA_ECOLI
BioCycECOL316407:JW1010-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1010-MONOMER
BioCycEcoCyc:G6531-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6531-MONOMER
BioCycMetaCyc:G6531-MONOMERhttp://biocyc.org/getid?id=MetaCyc:G6531-MONOMER
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1111/j.1365-2958.2009.06739.xhttp://dx.doi.org/10.1111/j.1365-2958.2009.06739.x
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1128/JB.01920-07http://dx.doi.org/10.1128/JB.01920-07
DOI10.1128/JB.186.9.2724-2734.2004http://dx.doi.org/10.1128/JB.186.9.2724-2734.2004
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB3625http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3625
EcoGeneEG13865http://www.ecogene.org/geneInfo.php?eg_id=EG13865
EnsemblBacteriaAAC74109http://www.ensemblgenomes.org/id/AAC74109
EnsemblBacteriaAAC74109http://www.ensemblgenomes.org/id/AAC74109
EnsemblBacteriaBAA35806http://www.ensemblgenomes.org/id/BAA35806
EnsemblBacteriaBAA35806http://www.ensemblgenomes.org/id/BAA35806
EnsemblBacteriaBAA35806http://www.ensemblgenomes.org/id/BAA35806
EnsemblBacteriab1024http://www.ensemblgenomes.org/id/b1024
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0009279http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009279
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0022891http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022891
GO_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GO_processGO:0044010http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044010
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0008150http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008150
Gene3D1.25.40.10http://www.cathdb.info/version/latest/superfamily/1.25.40.10
GeneID945596http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945596
HOGENOMHOG000118896http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000118896&db=HOGENOM6
IntActP69434http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P69434*
InterProIPR011990http://www.ebi.ac.uk/interpro/entry/IPR011990
InterProIPR013026http://www.ebi.ac.uk/interpro/entry/IPR013026
InterProIPR019734http://www.ebi.ac.uk/interpro/entry/IPR019734
InterProIPR023870http://www.ebi.ac.uk/interpro/entry/IPR023870
KEGG_Geneecj:JW1010http://www.genome.jp/dbget-bin/www_bget?ecj:JW1010
KEGG_Geneeco:b1024http://www.genome.jp/dbget-bin/www_bget?eco:b1024
KEGG_OrthologyKO:K11935http://www.genome.jp/dbget-bin/www_bget?KO:K11935
OMAIDAVLYShttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=IDAVLYS
PDB4Y25http://www.ebi.ac.uk/pdbe-srv/view/entry/4Y25
PDBsum4Y25http://www.ebi.ac.uk/pdbsum/4Y25
PROSITEPS50005http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50005
PROSITEPS50293http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50293
PSORT-Bswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:PGAA_ECOLI
PSORT2swissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:PGAA_ECOLI
PSORTswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:PGAA_ECOLI
Phobiusswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:PGAA_ECOLI
ProteinModelPortalP69434http://www.proteinmodelportal.org/query/uniprot/P69434
PubMed15090514http://www.ncbi.nlm.nih.gov/pubmed/15090514
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed18359807http://www.ncbi.nlm.nih.gov/pubmed/18359807
PubMed19460094http://www.ncbi.nlm.nih.gov/pubmed/19460094
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415543http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415543
RefSeqWP_000287458http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000287458
SMARTSM00028http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00028
SMRP69434http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P69434
STRING511145.b1024http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1024&targetmode=cogs
SUPFAMSSF48452http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF48452
TCDB1.B.55.1http://www.tcdb.org/search/result.php?tc=1.B.55.1
TIGRFAMsTIGR03939http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR03939
UniProtKB-ACP69434http://www.uniprot.org/uniprot/P69434
UniProtKBPGAA_ECOLIhttp://www.uniprot.org/uniprot/PGAA_ECOLI
chargeswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:PGAA_ECOLI
eggNOGENOG4108TUYhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4108TUY
eggNOGENOG4111HEPhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4111HEP
epestfindswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:PGAA_ECOLI
garnierswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:PGAA_ECOLI
helixturnhelixswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:PGAA_ECOLI
hmomentswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:PGAA_ECOLI
iepswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:PGAA_ECOLI
inforesidueswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:PGAA_ECOLI
octanolswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:PGAA_ECOLI
pepcoilswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:PGAA_ECOLI
pepdigestswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:PGAA_ECOLI
pepinfoswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:PGAA_ECOLI
pepnetswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:PGAA_ECOLI
pepstatsswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:PGAA_ECOLI
pepwheelswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:PGAA_ECOLI
pepwindowswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:PGAA_ECOLI
sigcleaveswissprot:PGAA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:PGAA_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426065517
# EcoGeneEG13702ycbJ
# InterProIPR002575Aminoglycoside_PTrfase
# InterProIPR011009Kinase-like_dom
# OrganismYCBJ_ECOLIEscherichia coli (strain K12)
# PATRIC32117051VBIEscCol129921_0950
# PIRF64831F64831
# PfamPF01636APH
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYCBJ_ECOLIUncharacterized protein YcbJ
# RefSeqNP_415439NC_000913.3
# RefSeqWP_000436922NZ_LN832404.1
# SUPFAMSSF56112SSF56112
# eggNOGENOG4107VR7Bacteria
# eggNOGENOG410XRNMLUCA
BLASTswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YCBJ_ECOLI
BioCycECOL316407:JW0902-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0902-MONOMER
BioCycEcoCyc:G6473-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6473-MONOMER
DIPDIP-48267Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-48267N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLJ02614http://www.ebi.ac.uk/ena/data/view/J02614
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB3466http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3466
EcoGeneEG13702http://www.ecogene.org/geneInfo.php?eg_id=EG13702
EnsemblBacteriaAAC74005http://www.ensemblgenomes.org/id/AAC74005
EnsemblBacteriaAAC74005http://www.ensemblgenomes.org/id/AAC74005
EnsemblBacteriaBAA35665http://www.ensemblgenomes.org/id/BAA35665
EnsemblBacteriaBAA35665http://www.ensemblgenomes.org/id/BAA35665
EnsemblBacteriaBAA35665http://www.ensemblgenomes.org/id/BAA35665
EnsemblBacteriab0919http://www.ensemblgenomes.org/id/b0919
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GeneID945545http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945545
HOGENOMHOG000118773http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000118773&db=HOGENOM6
IntActP0AB03http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0AB03*
InterProIPR002575http://www.ebi.ac.uk/interpro/entry/IPR002575
InterProIPR011009http://www.ebi.ac.uk/interpro/entry/IPR011009
KEGG_Geneecj:JW0902http://www.genome.jp/dbget-bin/www_bget?ecj:JW0902
KEGG_Geneeco:b0919http://www.genome.jp/dbget-bin/www_bget?eco:b0919
OMAWYQQRVEhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=WYQQRVE
PSORT-Bswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YCBJ_ECOLI
PSORT2swissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YCBJ_ECOLI
PSORTswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YCBJ_ECOLI
PfamPF01636http://pfam.xfam.org/family/PF01636
Phobiusswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YCBJ_ECOLI
ProteinModelPortalP0AB03http://www.proteinmodelportal.org/query/uniprot/P0AB03
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed3023327http://www.ncbi.nlm.nih.gov/pubmed/3023327
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415439http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415439
RefSeqWP_000436922http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000436922
SMRP0AB03http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0AB03
STRING511145.b0919http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0919&targetmode=cogs
SUPFAMSSF56112http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF56112
UniProtKB-ACP0AB03http://www.uniprot.org/uniprot/P0AB03
UniProtKBYCBJ_ECOLIhttp://www.uniprot.org/uniprot/YCBJ_ECOLI
chargeswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YCBJ_ECOLI
eggNOGENOG4107VR7http://eggnogapi.embl.de/nog_data/html/tree/ENOG4107VR7
eggNOGENOG410XRNMhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG410XRNM
epestfindswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YCBJ_ECOLI
garnierswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YCBJ_ECOLI
helixturnhelixswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YCBJ_ECOLI
hmomentswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YCBJ_ECOLI
iepswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YCBJ_ECOLI
inforesidueswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YCBJ_ECOLI
octanolswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YCBJ_ECOLI
pepcoilswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YCBJ_ECOLI
pepdigestswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YCBJ_ECOLI
pepinfoswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YCBJ_ECOLI
pepnetswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YCBJ_ECOLI
pepstatsswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YCBJ_ECOLI
pepwheelswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YCBJ_ECOLI
pepwindowswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YCBJ_ECOLI
sigcleaveswissprot:YCBJ_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YCBJ_ECOLI
DataBaseIDURL or Descriptions
# AltNameNFSA_ECOLIModulator of drug activity A
# BIOPHYSICOCHEMICAL PROPERTIESNFSA_ECOLIKinetic parameters KM=11 uM for NADPH {ECO 0000269|PubMed 8755878}; KM=5.5 uM for nitrofurazone {ECO 0000269|PubMed 8755878};
# BioGrid425999110
# CATALYTIC ACTIVITYAn oxidized nitroaromatic compound + NADPH = a reduced nitroaromatic compound + NADP(+). {ECO:0000269|PubMed8755878}.
# CDDcd02146NfsA_FRP
# COFACTORNFSA_ECOLIName=FMN; Xref=ChEBI CHEBI 58210; Evidence={ECO 0000269|PubMed 11034992, ECO 0000269|PubMed 8755878}; Note=Binds 1 FMN per monomer. {ECO 0000269|PubMed 11034992};
# DrugBankDB00698Nitrofurantoin
# EcoGeneEG11261nfsA
# FUNCTIONNFSA_ECOLICatalyzes the reduction of nitroaromatic compounds using NADPH. Has a broad electron acceptor specificity. Reduces nitrofurazone by a ping-pong bi-bi mechanism possibly to generate a two-electron transfer product. Major oxygen-insensitive nitroreductase in E.coli. {ECO 0000269|PubMed 8755878}.
# GO_componentGO:0005829cytosol; IDA:EcoCyc.
# GO_functionGO:0010181FMN binding; IDA:EcoCyc.
# GO_functionGO:0016657oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor; IDA:EcoCyc.
# GO_functionGO:0034567chromate reductase activity; IDA:EcoCyc.
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0016491oxidoreductase activity
# GOslim_functionGO:0043167ion binding
# Gene3D3.40.109.10-; 1.
# INTERACTIONNFSA_ECOLIP28630 holA; NbExp=3; IntAct=EBI-1120624, EBI-549153;
# IntActP171175
# InterProIPR000415Nitroreductase-like
# InterProIPR016446Flavin_OxRdtase_Frp
# InterProIPR029479Nitroreductase
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00633Nitrotoluene degradation
# OrganismNFSA_ECOLIEscherichia coli (strain K12)
# PATRIC32116907VBIEscCol129921_0879
# PDB1F5VX-ray; 1.70 A; A/B=1-240
# PIRI80318I80318
# PIRSFPIRSF005426Frp
# PfamPF00881Nitroreductase
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameOxygen-insensitive NADPH nitroreductase {ECO0000305}
# RefSeqNP_415372NC_000913.3
# RefSeqWP_000189159NZ_LN832404.1
# SEQUENCE CAUTIONSequence=CAA33867.1; Type=Frameshift; Positions=155, 161, 187; Evidence={ECO0000305};
# SIMILARITYBelongs to the flavin oxidoreductase frp family. {ECO0000305}.
# SUBUNITHomodimer. {ECO:0000269|PubMed11034992}.
# SUPFAMSSF55469SSF55469
# eggNOGCOG0778LUCA
# eggNOGENOG4108DBCBacteria
BLASTswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:NFSA_ECOLI
BioCycECOL316407:JW0835-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0835-MONOMER
BioCycEcoCyc:EG11261-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11261-MONOMER
BioCycMetaCyc:EG11261-MONOMERhttp://biocyc.org/getid?id=MetaCyc:EG11261-MONOMER
COGCOG0778http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0778
DIPDIP-10334Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-10334N
DOI10.1007/BF02464894http://dx.doi.org/10.1007/BF02464894
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.92.19.8950http://dx.doi.org/10.1073/pnas.92.19.8950
DOI10.1074/jbc.M002617200http://dx.doi.org/10.1074/jbc.M002617200
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DrugBankDB00698http://www.drugbank.ca/drugs/DB00698
EC_numberEC:1.-.-.- {ECO:0000269|PubMed:8755878}http://www.genome.jp/dbget-bin/www_bget?EC:1.-.-.- {ECO:0000269|PubMed:8755878}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLD38308http://www.ebi.ac.uk/ena/data/view/D38308
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU18655http://www.ebi.ac.uk/ena/data/view/U18655
EMBLX15859http://www.ebi.ac.uk/ena/data/view/X15859
ENZYME1.-.-.- {ECO:0000269|PubMed:8755878}http://enzyme.expasy.org/EC/1.-.-.- {ECO:0000269|PubMed:8755878}
EchoBASEEB1241http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1241
EcoGeneEG11261http://www.ecogene.org/geneInfo.php?eg_id=EG11261
EnsemblBacteriaAAC73938http://www.ensemblgenomes.org/id/AAC73938
EnsemblBacteriaAAC73938http://www.ensemblgenomes.org/id/AAC73938
EnsemblBacteriaBAA35562http://www.ensemblgenomes.org/id/BAA35562
EnsemblBacteriaBAA35562http://www.ensemblgenomes.org/id/BAA35562
EnsemblBacteriaBAA35562http://www.ensemblgenomes.org/id/BAA35562
EnsemblBacteriab0851http://www.ensemblgenomes.org/id/b0851
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_functionGO:0010181http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0010181
GO_functionGO:0016657http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016657
GO_functionGO:0034567http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034567
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
Gene3D3.40.109.10http://www.cathdb.info/version/latest/superfamily/3.40.109.10
GeneID945483http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945483
HOGENOMHOG000272869http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000272869&db=HOGENOM6
InParanoidP17117http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P17117
IntActP17117http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P17117*
IntEnz1.-.-.- {ECO:0000269|PubMed:8755878}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=1.-.-.- {ECO:0000269|PubMed:8755878}
InterProIPR000415http://www.ebi.ac.uk/interpro/entry/IPR000415
InterProIPR016446http://www.ebi.ac.uk/interpro/entry/IPR016446
InterProIPR029479http://www.ebi.ac.uk/interpro/entry/IPR029479
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW0835http://www.genome.jp/dbget-bin/www_bget?ecj:JW0835
KEGG_Geneeco:b0851http://www.genome.jp/dbget-bin/www_bget?eco:b0851
KEGG_OrthologyKO:K10678http://www.genome.jp/dbget-bin/www_bget?KO:K10678
KEGG_Pathwayko00633http://www.genome.jp/kegg-bin/show_pathway?ko00633
KEGG_Reactionrn:R08014http://www.genome.jp/dbget-bin/www_bget?rn:R08014
KEGG_Reactionrn:R08017http://www.genome.jp/dbget-bin/www_bget?rn:R08017
KEGG_Reactionrn:R08042http://www.genome.jp/dbget-bin/www_bget?rn:R08042
OMAAYYKERShttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=AYYKERS
PDB1F5Vhttp://www.ebi.ac.uk/pdbe-srv/view/entry/1F5V
PDBsum1F5Vhttp://www.ebi.ac.uk/pdbsum/1F5V
PSORT-Bswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:NFSA_ECOLI
PSORT2swissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:NFSA_ECOLI
PSORTswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:NFSA_ECOLI
PfamPF00881http://pfam.xfam.org/family/PF00881
Phobiusswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:NFSA_ECOLI
PhylomeDBP17117http://phylomedb.org/?seqid=P17117
ProteinModelPortalP17117http://www.proteinmodelportal.org/query/uniprot/P17117
PubMed11034992http://www.ncbi.nlm.nih.gov/pubmed/11034992
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2570347http://www.ncbi.nlm.nih.gov/pubmed/2570347
PubMed7568050http://www.ncbi.nlm.nih.gov/pubmed/7568050
PubMed8755878http://www.ncbi.nlm.nih.gov/pubmed/8755878
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9440535http://www.ncbi.nlm.nih.gov/pubmed/9440535
RefSeqNP_415372http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415372
RefSeqWP_000189159http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000189159
SMRP17117http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P17117
STRING511145.b0851http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0851&targetmode=cogs
STRINGCOG0778http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0778&targetmode=cogs
SUPFAMSSF55469http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF55469
UniProtKB-ACP17117http://www.uniprot.org/uniprot/P17117
UniProtKBNFSA_ECOLIhttp://www.uniprot.org/uniprot/NFSA_ECOLI
chargeswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:NFSA_ECOLI
eggNOGCOG0778http://eggnogapi.embl.de/nog_data/html/tree/COG0778
eggNOGENOG4108DBChttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4108DBC
epestfindswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:NFSA_ECOLI
garnierswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:NFSA_ECOLI
helixturnhelixswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:NFSA_ECOLI
hmomentswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:NFSA_ECOLI
iepswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:NFSA_ECOLI
inforesidueswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:NFSA_ECOLI
octanolswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:NFSA_ECOLI
pepcoilswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:NFSA_ECOLI
pepdigestswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:NFSA_ECOLI
pepinfoswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:NFSA_ECOLI
pepnetswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:NFSA_ECOLI
pepstatsswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:NFSA_ECOLI
pepwheelswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:NFSA_ECOLI
pepwindowswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:NFSA_ECOLI
sigcleaveswissprot:NFSA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:NFSA_ECOLI
DataBaseIDURL or Descriptions
# BRENDA1.1.1.942026
# BioGrid4261265401
# CATALYTIC ACTIVITYGLPD_ECOLIsn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.
# COFACTORName=FAD; Xref=ChEBI:CHEBI57692;
# EcoGeneEG10394glpD
# FUNCTIONGLPD_ECOLIConversion of glycerol 3-phosphate to dihydroxyacetone. Uses molecular oxygen or nitrate as electron acceptor.
# GO_componentGO:0005887integral component of plasma membrane; IDA:EcoCyc.
# GO_componentGO:0009331glycerol-3-phosphate dehydrogenase complex; IDA:EcoCyc.
# GO_functionGLPD_ECOLIGO 0052590 sn-glycerol-3-phosphate ubiquinone oxidoreductase activity; IDA EcoCyc.
# GO_functionGLPD_ECOLIGO 0052591 sn-glycerol-3-phosphate ubiquinone-8 oxidoreductase activity; IEA UniProtKB-EC.
# GO_functionGO:0009055electron carrier activity; IDA:EcoCyc.
# GO_functionGO:0071949FAD binding; IDA:EcoCyc.
# GO_processGO:0019563glycerol catabolic process; IEA:UniProtKB-UniPathway.
# GO_processGO:0046168glycerol-3-phosphate catabolic process; IMP:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0016491oxidoreductase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0005975carbohydrate metabolic process
# GOslim_processGO:0009056catabolic process
# GOslim_processGO:0044281small molecule metabolic process
# Gene3D3.50.50.60-; 1.
# IntActP1303590
# InterProIPR000447G3P_DH_FAD-dep
# InterProIPR006076FAD-dep_OxRdtase
# InterProIPR023753FAD/NAD-binding_dom
# InterProIPR031656DAO_C
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00564Glycerophospholipid metabolism
# MISCELLANEOUSThere are two sn-glycerol-3-phosphate dehydrogenase isozymes in E.coli one is aerobic, the other anaerobic.
# OrganismGLPD_ECOLIEscherichia coli (strain K12)
# PATHWAYPolyol metabolism; glycerol degradation via glycerol kinase pathway; glycerone phosphate from sn-glycerol 3-phosphate (aerobic route) step 1/1.
# PATRIC32122288VBIEscCol129921_3521
# PDB2QCUX-ray; 1.75 A; A/B=1-501
# PDB2R45X-ray; 2.30 A; A/B=1-501
# PDB2R46X-ray; 2.10 A; A/B=1-501
# PDB2R4EX-ray; 2.10 A; A/B=1-501
# PDB2R4JX-ray; 1.96 A; A/B=1-501
# PIRA39186DEECGD
# PRINTSPR01001FADG3PDH
# PROSITEPS00977FAD_G3PDH_1
# PROSITEPS00978FAD_G3PDH_2
# PfamPF01266DAO
# PfamPF16901DAO_C
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameGLPD_ECOLIAerobic glycerol-3-phosphate dehydrogenase
# RefSeqNP_417884NC_000913.3
# RefSeqWP_000448136NZ_LN832404.1
# SEQUENCE CAUTIONSequence=AAA23888.1; Type=Erroneous initiation; Evidence={ECO0000305};
# SIMILARITYBelongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. {ECO0000305}.
# SUBCELLULAR LOCATIONGLPD_ECOLICytoplasm.
# SUPFAMSSF51905SSF51905; 2
# UniPathwayUPA00618UER00674
# eggNOGCOG0578LUCA
# eggNOGENOG4105C6VBacteria
BLASTswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:GLPD_ECOLI
BioCycECOL316407:JW3389-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3389-MONOMER
BioCycEcoCyc:AERGLYC3PDEHYDROG-MONOMERhttp://biocyc.org/getid?id=EcoCyc:AERGLYC3PDEHYDROG-MONOMER
BioCycMetaCyc:AERGLYC3PDEHYDROG-MONOMERhttp://biocyc.org/getid?id=MetaCyc:AERGLYC3PDEHYDROG-MONOMER
COGCOG0578http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0578
DIPDIP-9793Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9793N
DOI10.1002/elps.1150180805http://dx.doi.org/10.1002/elps.1150180805
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/16.15.7732http://dx.doi.org/10.1093/nar/16.15.7732
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:1.1.5.3http://www.genome.jp/dbget-bin/www_bget?EC:1.1.5.3
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLD00425http://www.ebi.ac.uk/ena/data/view/D00425
EMBLM21277http://www.ebi.ac.uk/ena/data/view/M21277
EMBLM54940http://www.ebi.ac.uk/ena/data/view/M54940
EMBLM55989http://www.ebi.ac.uk/ena/data/view/M55989
EMBLM96795http://www.ebi.ac.uk/ena/data/view/M96795
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU18997http://www.ebi.ac.uk/ena/data/view/U18997
ENZYME1.1.5.3http://enzyme.expasy.org/EC/1.1.5.3
EchoBASEEB0389http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0389
EcoGeneEG10394http://www.ecogene.org/geneInfo.php?eg_id=EG10394
EnsemblBacteriaAAC76451http://www.ensemblgenomes.org/id/AAC76451
EnsemblBacteriaAAC76451http://www.ensemblgenomes.org/id/AAC76451
EnsemblBacteriaBAE77866http://www.ensemblgenomes.org/id/BAE77866
EnsemblBacteriaBAE77866http://www.ensemblgenomes.org/id/BAE77866
EnsemblBacteriaBAE77866http://www.ensemblgenomes.org/id/BAE77866
EnsemblBacteriab3426http://www.ensemblgenomes.org/id/b3426
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005887http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005887
GO_componentGO:0009331http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009331
GO_functionGO:0009055http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009055
GO_functionGO:0052590http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0052590
GO_functionGO:0052591http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0052591
GO_functionGO:0071949http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0071949
GO_processGO:0019563http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0019563
GO_processGO:0046168http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046168
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GOslim_processGO:0009056http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009056
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
Gene3D3.50.50.60http://www.cathdb.info/version/latest/superfamily/3.50.50.60
GeneID947934http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947934
HOGENOMHOG000004811http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000004811&db=HOGENOM6
InParanoidP13035http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P13035
IntActP13035http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P13035*
IntEnz1.1.5.3http://www.ebi.ac.uk/intenz/query?cmd=Search&q=1.1.5.3
InterProIPR000447http://www.ebi.ac.uk/interpro/entry/IPR000447
InterProIPR006076http://www.ebi.ac.uk/interpro/entry/IPR006076
InterProIPR023753http://www.ebi.ac.uk/interpro/entry/IPR023753
InterProIPR031656http://www.ebi.ac.uk/interpro/entry/IPR031656
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW3389http://www.genome.jp/dbget-bin/www_bget?ecj:JW3389
KEGG_Geneeco:b3426http://www.genome.jp/dbget-bin/www_bget?eco:b3426
KEGG_OrthologyKO:K00111http://www.genome.jp/dbget-bin/www_bget?KO:K00111
KEGG_Pathwayko00564http://www.genome.jp/kegg-bin/show_pathway?ko00564
KEGG_Reactionrn:R00848http://www.genome.jp/dbget-bin/www_bget?rn:R00848
MINTMINT-1248675http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1248675
OMAPWVAKFIhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=PWVAKFI
PDB2QCUhttp://www.ebi.ac.uk/pdbe-srv/view/entry/2QCU
PDB2R45http://www.ebi.ac.uk/pdbe-srv/view/entry/2R45
PDB2R46http://www.ebi.ac.uk/pdbe-srv/view/entry/2R46
PDB2R4Ehttp://www.ebi.ac.uk/pdbe-srv/view/entry/2R4E
PDB2R4Jhttp://www.ebi.ac.uk/pdbe-srv/view/entry/2R4J
PDBsum2QCUhttp://www.ebi.ac.uk/pdbsum/2QCU
PDBsum2R45http://www.ebi.ac.uk/pdbsum/2R45
PDBsum2R46http://www.ebi.ac.uk/pdbsum/2R46
PDBsum2R4Ehttp://www.ebi.ac.uk/pdbsum/2R4E
PDBsum2R4Jhttp://www.ebi.ac.uk/pdbsum/2R4J
PRINTSPR01001http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR01001
PROSITEPS00977http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00977
PROSITEPS00978http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00978
PSORT-Bswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:GLPD_ECOLI
PSORT2swissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:GLPD_ECOLI
PSORTswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:GLPD_ECOLI
PfamPF01266http://pfam.xfam.org/family/PF01266
PfamPF16901http://pfam.xfam.org/family/PF16901
Phobiusswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:GLPD_ECOLI
PhylomeDBP13035http://phylomedb.org/?seqid=P13035
ProteinModelPortalP13035http://www.proteinmodelportal.org/query/uniprot/P13035
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed1987111http://www.ncbi.nlm.nih.gov/pubmed/1987111
PubMed3045087http://www.ncbi.nlm.nih.gov/pubmed/3045087
PubMed3045764http://www.ncbi.nlm.nih.gov/pubmed/3045764
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9298644http://www.ncbi.nlm.nih.gov/pubmed/9298644
RefSeqNP_417884http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417884
RefSeqWP_000448136http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000448136
SMRP13035http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P13035
STRING511145.b3426http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3426&targetmode=cogs
STRINGCOG0578http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0578&targetmode=cogs
SUPFAMSSF51905http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF51905
SWISS-2DPAGEP13035http://world-2dpage.expasy.org/swiss-2dpage/protein/ac=P13035
UniProtKB-ACP13035http://www.uniprot.org/uniprot/P13035
UniProtKBGLPD_ECOLIhttp://www.uniprot.org/uniprot/GLPD_ECOLI
chargeswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:GLPD_ECOLI
eggNOGCOG0578http://eggnogapi.embl.de/nog_data/html/tree/COG0578
eggNOGENOG4105C6Vhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105C6V
epestfindswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:GLPD_ECOLI
garnierswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:GLPD_ECOLI
helixturnhelixswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:GLPD_ECOLI
hmomentswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:GLPD_ECOLI
iepswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:GLPD_ECOLI
inforesidueswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:GLPD_ECOLI
octanolswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:GLPD_ECOLI
pepcoilswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:GLPD_ECOLI
pepdigestswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:GLPD_ECOLI
pepinfoswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:GLPD_ECOLI
pepnetswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:GLPD_ECOLI
pepstatsswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:GLPD_ECOLI
pepwheelswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:GLPD_ECOLI
pepwindowswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:GLPD_ECOLI
sigcleaveswissprot:GLPD_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:GLPD_ECOLI
DataBaseIDURL or Descriptions
# BioGrid425998611
# CATALYTIC ACTIVITYYLIE_ECOLICyclic di-3',5'-guanylate + H(2)O = 5'- phosphoguanylyl(3'->5')guanosine.
# CDDcd01948EAL
# DISRUPTION PHENOTYPECells lacking this gene have a weak reduction in swarm size. {ECO:0000269|PubMed20303158}.
# EcoGeneEG13476yliE
# FUNCTIONYLIE_ECOLIOverexpression reduces biofilm formation. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria. {ECO 0000269|PubMed 19460094}.
# GO_functionGO:0071111cyclic-guanylate-specific phosphodiesterase activity; IEA:UniProtKB-EC.
# GOslim_functionGO:0003674molecular_function
# Gene3D3.20.20.450-; 1.
# InterProIPR001633EAL_dom
# InterProIPR033418CHASE9
# OrganismYLIE_ECOLIEscherichia coli (strain K12)
# PATRIC32116869VBIEscCol129921_0860
# PIRA64821A64821
# PROSITEPS50883EAL
# PfamPF00563EAL
# PfamPF17153CHASE9
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYLIE_ECOLIPutative cyclic di-GMP phosphodiesterase YliE
# RefSeqNP_415354NC_000913.3
# RefSeqWP_001360263NZ_LN832404.1
# SIMILARITYContains 1 EAL domain. {ECO:0000255|PROSITE- ProRulePRU00074}.
# SMARTSM00052EAL
# SUPFAMSSF141868SSF141868
# eggNOGENOG4105BZUBacteria
# eggNOGENOG410XNMHLUCA
BLASTswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YLIE_ECOLI
BioCycECOL316407:JW0817-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0817-MONOMER
BioCycEcoCyc:G6433-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6433-MONOMER
DOI10.1016/j.cell.2010.01.018http://dx.doi.org/10.1016/j.cell.2010.01.018
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1111/j.1365-2958.2009.06739.xhttp://dx.doi.org/10.1111/j.1365-2958.2009.06739.x
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:3.1.4.52http://www.genome.jp/dbget-bin/www_bget?EC:3.1.4.52
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
ENZYME3.1.4.52http://enzyme.expasy.org/EC/3.1.4.52
EchoBASEEB3249http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3249
EcoGeneEG13476http://www.ecogene.org/geneInfo.php?eg_id=EG13476
EnsemblBacteriaAAC73920http://www.ensemblgenomes.org/id/AAC73920
EnsemblBacteriaAAC73920http://www.ensemblgenomes.org/id/AAC73920
EnsemblBacteriaBAA35528http://www.ensemblgenomes.org/id/BAA35528
EnsemblBacteriaBAA35528http://www.ensemblgenomes.org/id/BAA35528
EnsemblBacteriaBAA35528http://www.ensemblgenomes.org/id/BAA35528
EnsemblBacteriab0833http://www.ensemblgenomes.org/id/b0833
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_functionGO:0071111http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0071111
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
Gene3D3.20.20.450http://www.cathdb.info/version/latest/superfamily/3.20.20.450
GeneID945462http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945462
HOGENOMHOG000118172http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000118172&db=HOGENOM6
IntEnz3.1.4.52http://www.ebi.ac.uk/intenz/query?cmd=Search&q=3.1.4.52
InterProIPR001633http://www.ebi.ac.uk/interpro/entry/IPR001633
InterProIPR033418http://www.ebi.ac.uk/interpro/entry/IPR033418
KEGG_Geneecj:JW0817http://www.genome.jp/dbget-bin/www_bget?ecj:JW0817
KEGG_Geneeco:b0833http://www.genome.jp/dbget-bin/www_bget?eco:b0833
OMAGFLLHINhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=GFLLHIN
PROSITEPS50883http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50883
PSORT-Bswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YLIE_ECOLI
PSORT2swissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YLIE_ECOLI
PSORTswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YLIE_ECOLI
PfamPF00563http://pfam.xfam.org/family/PF00563
PfamPF17153http://pfam.xfam.org/family/PF17153
Phobiusswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YLIE_ECOLI
PhylomeDBP75800http://phylomedb.org/?seqid=P75800
ProteinModelPortalP75800http://www.proteinmodelportal.org/query/uniprot/P75800
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed19460094http://www.ncbi.nlm.nih.gov/pubmed/19460094
PubMed20303158http://www.ncbi.nlm.nih.gov/pubmed/20303158
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415354http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415354
RefSeqWP_001360263http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001360263
SMARTSM00052http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00052
SMRP75800http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P75800
STRING511145.b0833http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0833&targetmode=cogs
SUPFAMSSF141868http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF141868
UniProtKB-ACP75800http://www.uniprot.org/uniprot/P75800
UniProtKBYLIE_ECOLIhttp://www.uniprot.org/uniprot/YLIE_ECOLI
chargeswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YLIE_ECOLI
eggNOGENOG4105BZUhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105BZU
eggNOGENOG410XNMHhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG410XNMH
epestfindswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YLIE_ECOLI
garnierswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YLIE_ECOLI
helixturnhelixswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YLIE_ECOLI
hmomentswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YLIE_ECOLI
iepswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YLIE_ECOLI
inforesidueswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YLIE_ECOLI
octanolswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YLIE_ECOLI
pepcoilswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YLIE_ECOLI
pepdigestswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YLIE_ECOLI
pepinfoswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YLIE_ECOLI
pepnetswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YLIE_ECOLI
pepstatsswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YLIE_ECOLI
pepwheelswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YLIE_ECOLI
pepwindowswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YLIE_ECOLI
sigcleaveswissprot:YLIE_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YLIE_ECOLI
DataBaseIDURL or Descriptions
# AltNameMCP3_ECOLIRibose and galactose chemoreceptor protein
# BioGrid4261384311
# CDDcd00181Tar_Tsr_LBD
# CDDcd06225HAMP
# EcoGeneEG11018trg
# FUNCTIONMCP3_ECOLIChemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. Attractants increase the level of methylation while repellents decrease the level of methylation, the methyl groups are added by the methyltransferase CheR and removed by the methylesterase CheB.
# FUNCTIONMCP3_ECOLIMediates taxis to the sugars ribose and galactose via an interaction with the periplasmic ribose- or galactose-binding proteins.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0004888transmembrane signaling receptor activity; IMP:EcoCyc.
# GO_processGO:0006935chemotaxis; IMP:EcoCyc.
# GO_processGO:0007165signal transduction; IMP:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0004871signal transducer activity
# GOslim_processGO:0007165signal transduction
# GOslim_processGO:0040011locomotion
# Gene3D1.20.120.30-; 1.
# INTERACTIONMCP3_ECOLIP45543 frlD; NbExp=5; IntAct=EBI-557436, EBI-562037;
# IntActP057045
# InterProIPR003122Chemotax_Me-accpt_rcpt_lig-bd
# InterProIPR003660HAMP_dom
# InterProIPR004089MCPsignal_dom
# InterProIPR004090Chemotax_Me-accpt_rcpt
# InterProIPR004091Chemotax_Me-accpt_rcpt_Me-site
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko02035 Bacterial motility proteins
# KEGG_Pathwayko02020Two-component system
# KEGG_Pathwayko02030Bacterial chemotaxis
# OrganismMCP3_ECOLIEscherichia coli (strain K12)
# PATRIC32118128VBIEscCol129921_1484
# PIRH64893QREC3M
# PRINTSPR00260CHEMTRNSDUCR
# PROSITEPS00538CHEMOTAXIS_TRANSDUC_1
# PROSITEPS50111CHEMOTAXIS_TRANSDUC_2
# PROSITEPS50885HAMP
# PfamPF00015MCPsignal
# PfamPF00672HAMP
# PfamPF02203TarH
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameMCP3_ECOLIMethyl-accepting chemotaxis protein III
# RefSeqNP_415938NC_000913.3
# RefSeqWP_001098559NZ_LN832404.1
# SIMILARITYContains 1 HAMP domain. {ECO:0000255|PROSITE- ProRulePRU00102}.
# SIMILARITYContains 1 methyl-accepting transducer domain. {ECO:0000255|PROSITE-ProRulePRU00284}.
# SMARTSM00283MA
# SMARTSM00304HAMP
# SMARTSM00319TarH
# SUBCELLULAR LOCATIONMCP3_ECOLICell inner membrane {ECO 0000269|PubMed 15919996, ECO 0000269|PubMed 22380631}; Multi- pass membrane protein {ECO 0000269|PubMed 15919996, ECO 0000269|PubMed 22380631}. Note=Found predominantly at cell poles.
# SUPFAMSSF47170SSF47170
# eggNOGCOG0840LUCA
# eggNOGENOG4105C8QBacteria
BLASTswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:MCP3_ECOLI
BioCycECOL316407:JW1417-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1417-MONOMER
BioCycEcoCyc:TRG-MONOMERhttp://biocyc.org/getid?id=EcoCyc:TRG-MONOMER
COGCOG0840http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0840
DIPDIP-11027Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-11027N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1073/pnas.81.11.3287http://dx.doi.org/10.1073/pnas.81.11.3287
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1111/j.1365-2958.2012.08021.xhttp://dx.doi.org/10.1111/j.1365-2958.2012.08021.x
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLK02073http://www.ebi.ac.uk/ena/data/view/K02073
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB1011http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1011
EcoGeneEG11018http://www.ecogene.org/geneInfo.php?eg_id=EG11018
EnsemblBacteriaAAC74503http://www.ensemblgenomes.org/id/AAC74503
EnsemblBacteriaAAC74503http://www.ensemblgenomes.org/id/AAC74503
EnsemblBacteriaBAA15044http://www.ensemblgenomes.org/id/BAA15044
EnsemblBacteriaBAA15044http://www.ensemblgenomes.org/id/BAA15044
EnsemblBacteriaBAA15044http://www.ensemblgenomes.org/id/BAA15044
EnsemblBacteriab1421http://www.ensemblgenomes.org/id/b1421
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0004888http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004888
GO_processGO:0006935http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006935
GO_processGO:0007165http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0007165
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0004871http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004871
GOslim_processGO:0007165http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0007165
GOslim_processGO:0040011http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0040011
Gene3D1.20.120.30http://www.cathdb.info/version/latest/superfamily/1.20.120.30
GeneID945995http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945995
HOGENOMHOG000148074http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000148074&db=HOGENOM6
InParanoidP05704http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P05704
IntActP05704http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P05704*
InterProIPR003122http://www.ebi.ac.uk/interpro/entry/IPR003122
InterProIPR003660http://www.ebi.ac.uk/interpro/entry/IPR003660
InterProIPR004089http://www.ebi.ac.uk/interpro/entry/IPR004089
InterProIPR004090http://www.ebi.ac.uk/interpro/entry/IPR004090
InterProIPR004091http://www.ebi.ac.uk/interpro/entry/IPR004091
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko02035http://www.genome.jp/dbget-bin/www_bget?ko02035
KEGG_Geneecj:JW1417http://www.genome.jp/dbget-bin/www_bget?ecj:JW1417
KEGG_Geneeco:b1421http://www.genome.jp/dbget-bin/www_bget?eco:b1421
KEGG_OrthologyKO:K05876http://www.genome.jp/dbget-bin/www_bget?KO:K05876
KEGG_Pathwayko02020http://www.genome.jp/kegg-bin/show_pathway?ko02020
KEGG_Pathwayko02030http://www.genome.jp/kegg-bin/show_pathway?ko02030
MINTMINT-1228342http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1228342
OMANRHLQQMhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=NRHLQQM
PRINTSPR00260http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00260
PROSITEPS00538http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00538
PROSITEPS50111http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50111
PROSITEPS50885http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS50885
PSORT-Bswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:MCP3_ECOLI
PSORT2swissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:MCP3_ECOLI
PSORTswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:MCP3_ECOLI
PfamPF00015http://pfam.xfam.org/family/PF00015
PfamPF00672http://pfam.xfam.org/family/PF00672
PfamPF02203http://pfam.xfam.org/family/PF02203
Phobiusswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:MCP3_ECOLI
PhylomeDBP05704http://phylomedb.org/?seqid=P05704
ProteinModelPortalP05704http://www.proteinmodelportal.org/query/uniprot/P05704
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed22380631http://www.ncbi.nlm.nih.gov/pubmed/22380631
PubMed6300110http://www.ncbi.nlm.nih.gov/pubmed/6300110
PubMed6374654http://www.ncbi.nlm.nih.gov/pubmed/6374654
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415938http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415938
RefSeqWP_001098559http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001098559
SMARTSM00283http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00283
SMARTSM00304http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00304
SMARTSM00319http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00319
SMRP05704http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P05704
STRING511145.b1421http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1421&targetmode=cogs
STRINGCOG0840http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0840&targetmode=cogs
SUPFAMSSF47170http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF47170
UniProtKB-ACP05704http://www.uniprot.org/uniprot/P05704
UniProtKBMCP3_ECOLIhttp://www.uniprot.org/uniprot/MCP3_ECOLI
chargeswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:MCP3_ECOLI
eggNOGCOG0840http://eggnogapi.embl.de/nog_data/html/tree/COG0840
eggNOGENOG4105C8Qhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105C8Q
epestfindswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:MCP3_ECOLI
garnierswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:MCP3_ECOLI
helixturnhelixswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:MCP3_ECOLI
hmomentswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:MCP3_ECOLI
iepswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:MCP3_ECOLI
inforesidueswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:MCP3_ECOLI
octanolswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:MCP3_ECOLI
pepcoilswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:MCP3_ECOLI
pepdigestswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:MCP3_ECOLI
pepinfoswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:MCP3_ECOLI
pepnetswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:MCP3_ECOLI
pepstatsswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:MCP3_ECOLI
pepwheelswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:MCP3_ECOLI
pepwindowswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:MCP3_ECOLI
sigcleaveswissprot:MCP3_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:MCP3_ECOLI
DataBaseIDURL or Descriptions
# AltNameLYXK_ECOLI3-dehydro-L-gulonate kinase
# BIOPHYSICOCHEMICAL PROPERTIESLYXK_ECOLIKinetic parameters KM=0.8 mM for L-xylulose {ECO 0000269|PubMed 7961955}; KM=0.4 mM for ATP {ECO 0000269|PubMed 7961955}; Vmax=33 umol/min/mg enzyme with L-xylulose as substrate {ECO 0000269|PubMed 7961955}; pH dependence Optimum pH is 8.4 with L-xylulose as substrate. {ECO 0000269|PubMed 7961955};
# BioGrid42625507
# CATALYTIC ACTIVITYLYXK_ECOLIATP + 3-dehydro-L-gulonate = ADP + 3-dehydro- L-gulonate 6-phosphate.
# CATALYTIC ACTIVITYLYXK_ECOLIATP + L-xylulose = ADP + L-xylulose 5- phosphate.
# EcoGeneEG12284lyx
# FUNCTIONLYXK_ECOLICatalyzes the phosphorylation of L-xylulose and 3-keto- L-gulonate. Is involved in L-lyxose utilization via xylulose, and may also be involved in the utilization of 2,3-diketo-L-gulonate. {ECO 0000269|PubMed 11741871, ECO 0000269|PubMed 7961955}.
# GO_componentGO:0005737cytoplasm; IBA:GO_Central.
# GO_functionGO:0005524ATP binding; IEA:UniProtKB-KW.
# GO_functionGO:0008744L-xylulokinase activity; IDA:EcoCyc.
# GO_processGO:0019324L-lyxose metabolic process; IMP:EcoCyc.
# GOslim_componentGO:0005737cytoplasm
# GOslim_functionGO:0016301kinase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0005975carbohydrate metabolic process
# GOslim_processGO:0044281small molecule metabolic process
# IntActP376772
# InterProIPR000577Carb_kinase_FGGY
# InterProIPR018483Carb_kinase_FGGY_CS
# InterProIPR018484Carb_kinase_FGGY_N
# InterProIPR018485Carb_kinase_FGGY_C
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00040Pentose and glucuronate interconversions
# KEGG_Pathwayko00053Ascorbate and aldarate metabolism
# OrganismLYXK_ECOLIEscherichia coli (strain K12)
# PATRIC32122636VBIEscCol129921_3695
# PIRS47801S47801
# PIRSFPIRSF000538GlpK
# PROSITEPS00445FGGY_KINASES_2
# PfamPF00370FGGY_N
# PfamPF02782FGGY_C
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameLYXK_ECOLIL-xylulose/3-keto-L-gulonate kinase
# RefSeqNP_418037NC_000913.3
# RefSeqWP_000196054NZ_LN832404.1
# SIMILARITYBelongs to the FGGY kinase family. {ECO0000305}.
# SUBUNITHomodimer. {ECO:0000269|PubMed7961955}.
# eggNOGCOG1070LUCA
# eggNOGENOG4105CMGBacteria
BLASTswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:LYXK_ECOLI
BioCycECOL316407:JW3552-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3552-MONOMER
BioCycEcoCyc:LYXK-MONOMERhttp://biocyc.org/getid?id=EcoCyc:LYXK-MONOMER
BioCycMetaCyc:LYXK-MONOMERhttp://biocyc.org/getid?id=MetaCyc:LYXK-MONOMER
COGCOG1070http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1070
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/22.13.2576http://dx.doi.org/10.1093/nar/22.13.2576
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1128/JB.184.1.302-306.2002http://dx.doi.org/10.1128/JB.184.1.302-306.2002
EC_numberEC:2.7.1.-http://www.genome.jp/dbget-bin/www_bget?EC:2.7.1.-
EC_numberEC:2.7.1.53http://www.genome.jp/dbget-bin/www_bget?EC:2.7.1.53
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00039http://www.ebi.ac.uk/ena/data/view/U00039
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
ENZYME2.7.1.-http://enzyme.expasy.org/EC/2.7.1.-
ENZYME2.7.1.53http://enzyme.expasy.org/EC/2.7.1.53
EchoBASEEB2192http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2192
EcoGeneEG12284http://www.ecogene.org/geneInfo.php?eg_id=EG12284
EnsemblBacteriaAAC76604http://www.ensemblgenomes.org/id/AAC76604
EnsemblBacteriaAAC76604http://www.ensemblgenomes.org/id/AAC76604
EnsemblBacteriaBAE77713http://www.ensemblgenomes.org/id/BAE77713
EnsemblBacteriaBAE77713http://www.ensemblgenomes.org/id/BAE77713
EnsemblBacteriaBAE77713http://www.ensemblgenomes.org/id/BAE77713
EnsemblBacteriab3580http://www.ensemblgenomes.org/id/b3580
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GO_functionGO:0005524http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005524
GO_functionGO:0008744http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008744
GO_processGO:0019324http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0019324
GOslim_componentGO:0005737http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005737
GOslim_functionGO:0016301http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016301
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
GeneID948101http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=948101
HOGENOMHOG000222135http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000222135&db=HOGENOM6
InParanoidP37677http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P37677
IntActP37677http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P37677*
IntEnz2.7.1.53http://www.ebi.ac.uk/intenz/query?cmd=Search&q=2.7.1.53
IntEnz2.7.1http://www.ebi.ac.uk/intenz/query?cmd=Search&q=2.7.1
InterProIPR000577http://www.ebi.ac.uk/interpro/entry/IPR000577
InterProIPR018483http://www.ebi.ac.uk/interpro/entry/IPR018483
InterProIPR018484http://www.ebi.ac.uk/interpro/entry/IPR018484
InterProIPR018485http://www.ebi.ac.uk/interpro/entry/IPR018485
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW3552http://www.genome.jp/dbget-bin/www_bget?ecj:JW3552
KEGG_Geneeco:b3580http://www.genome.jp/dbget-bin/www_bget?eco:b3580
KEGG_OrthologyKO:K00880http://www.genome.jp/dbget-bin/www_bget?KO:K00880
KEGG_Pathwayko00040http://www.genome.jp/kegg-bin/show_pathway?ko00040
KEGG_Pathwayko00053http://www.genome.jp/kegg-bin/show_pathway?ko00053
KEGG_Reactionrn:R01901http://www.genome.jp/dbget-bin/www_bget?rn:R01901
KEGG_Reactionrn:R07127http://www.genome.jp/dbget-bin/www_bget?rn:R07127
OMAACEETNIhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=ACEETNI
PROSITEPS00445http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00445
PSORT-Bswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:LYXK_ECOLI
PSORT2swissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:LYXK_ECOLI
PSORTswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:LYXK_ECOLI
PfamPF00370http://pfam.xfam.org/family/PF00370
PfamPF02782http://pfam.xfam.org/family/PF02782
Phobiusswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:LYXK_ECOLI
PhylomeDBP37677http://phylomedb.org/?seqid=P37677
ProteinModelPortalP37677http://www.proteinmodelportal.org/query/uniprot/P37677
PubMed11741871http://www.ncbi.nlm.nih.gov/pubmed/11741871
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed7961955http://www.ncbi.nlm.nih.gov/pubmed/7961955
PubMed8041620http://www.ncbi.nlm.nih.gov/pubmed/8041620
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_418037http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_418037
RefSeqWP_000196054http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000196054
SMRP37677http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P37677
STRING511145.b3580http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3580&targetmode=cogs
STRINGCOG1070http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1070&targetmode=cogs
UniProtKB-ACP37677http://www.uniprot.org/uniprot/P37677
UniProtKBLYXK_ECOLIhttp://www.uniprot.org/uniprot/LYXK_ECOLI
chargeswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:LYXK_ECOLI
eggNOGCOG1070http://eggnogapi.embl.de/nog_data/html/tree/COG1070
eggNOGENOG4105CMGhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105CMG
epestfindswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:LYXK_ECOLI
garnierswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:LYXK_ECOLI
helixturnhelixswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:LYXK_ECOLI
hmomentswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:LYXK_ECOLI
iepswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:LYXK_ECOLI
inforesidueswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:LYXK_ECOLI
octanolswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:LYXK_ECOLI
pepcoilswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:LYXK_ECOLI
pepdigestswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:LYXK_ECOLI
pepinfoswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:LYXK_ECOLI
pepnetswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:LYXK_ECOLI
pepstatsswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:LYXK_ECOLI
pepwheelswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:LYXK_ECOLI
pepwindowswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:LYXK_ECOLI
sigcleaveswissprot:LYXK_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:LYXK_ECOLI
DataBaseIDURL or Descriptions
# BioGrid425957644
# EcoGeneEG11759yciK
# GO_componentGO:0005622intracellular; IBA:GO_Central.
# GO_functionGO:0016491oxidoreductase activity; IBA:GO_Central.
# GO_processGO:1901575organic substance catabolic process; IBA:GO_Central.
# GOslim_componentGO:0005622intracellular
# GOslim_functionGO:0016491oxidoreductase activity
# GOslim_processGO:0009056catabolic process
# Gene3D3.40.50.720-; 1.
# IntActP318086
# InterProIPR002347SDR_fam
# InterProIPR016040NAD(P)-bd_dom
# InterProIPR020904Sc_DH/Rdtase_CS
# OrganismYCIK_ECOLIEscherichia coli (strain K12)
# PANTHERPTHR24322PTHR24322; 2
# PATRIC32117800VBIEscCol129921_1320
# PDB3E9QX-ray; 1.70 A; A/B=1-252
# PDB3F1KX-ray; 2.60 A; A=1-252
# PDB3F1LX-ray; 0.95 A; A/B=1-252
# PIRB64875B64875
# PRINTSPR00081GDHRDH
# PROSITEPS00061ADH_SHORT
# PfamPF00106adh_short
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYCIK_ECOLIUncharacterized oxidoreductase YciK
# RefSeqNP_415787NC_000913.3
# RefSeqWP_000559286NZ_LN832404.1
# SEQUENCE CAUTIONSequence=AAB59991.1; Type=Frameshift; Positions=115; Evidence={ECO:0000305}; Sequence=AAB59992.1; Type=Frameshift; Positions=115; Evidence={ECO0000305};
# SIMILARITYBelongs to the short-chain dehydrogenases/reductases (SDR) family. {ECO0000305}.
# SUPFAMSSF51735SSF51735
# eggNOGCOG1028LUCA
# eggNOGENOG4105UBKBacteria
BLASTswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YCIK_ECOLI
BioCycECOL316407:JW1263-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1263-MONOMER
BioCycEcoCyc:EG11759-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11759-MONOMER
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:1.-.-.-http://www.genome.jp/dbget-bin/www_bget?EC:1.-.-.-
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM73320http://www.ebi.ac.uk/ena/data/view/M73320
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU17433http://www.ebi.ac.uk/ena/data/view/U17433
EMBLU17433http://www.ebi.ac.uk/ena/data/view/U17433
ENZYME1.-.-.-http://enzyme.expasy.org/EC/1.-.-.-
EchoBASEEB1709http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1709
EcoGeneEG11759http://www.ecogene.org/geneInfo.php?eg_id=EG11759
EnsemblBacteriaAAC74353http://www.ensemblgenomes.org/id/AAC74353
EnsemblBacteriaAAC74353http://www.ensemblgenomes.org/id/AAC74353
EnsemblBacteriaBAA14808http://www.ensemblgenomes.org/id/BAA14808
EnsemblBacteriaBAA14808http://www.ensemblgenomes.org/id/BAA14808
EnsemblBacteriaBAA14808http://www.ensemblgenomes.org/id/BAA14808
EnsemblBacteriab1271http://www.ensemblgenomes.org/id/b1271
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005622http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005622
GO_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GO_processGO:1901575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:1901575
GOslim_componentGO:0005622http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005622
GOslim_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GOslim_processGO:0009056http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009056
Gene3D3.40.50.720http://www.cathdb.info/version/latest/superfamily/3.40.50.720
GeneID945838http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945838
InParanoidP31808http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P31808
IntActP31808http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P31808*
IntEnz1http://www.ebi.ac.uk/intenz/query?cmd=Search&q=1
InterProIPR002347http://www.ebi.ac.uk/interpro/entry/IPR002347
InterProIPR016040http://www.ebi.ac.uk/interpro/entry/IPR016040
InterProIPR020904http://www.ebi.ac.uk/interpro/entry/IPR020904
KEGG_Geneecj:JW1263http://www.genome.jp/dbget-bin/www_bget?ecj:JW1263
KEGG_Geneeco:b1271http://www.genome.jp/dbget-bin/www_bget?eco:b1271
OMALAHEYEDhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=LAHEYED
PANTHERPTHR24322http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24322
PDB3E9Qhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3E9Q
PDB3F1Khttp://www.ebi.ac.uk/pdbe-srv/view/entry/3F1K
PDB3F1Lhttp://www.ebi.ac.uk/pdbe-srv/view/entry/3F1L
PDBsum3E9Qhttp://www.ebi.ac.uk/pdbsum/3E9Q
PDBsum3F1Khttp://www.ebi.ac.uk/pdbsum/3F1K
PDBsum3F1Lhttp://www.ebi.ac.uk/pdbsum/3F1L
PRINTSPR00081http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00081
PROSITEPS00061http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00061
PSORT-Bswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YCIK_ECOLI
PSORT2swissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YCIK_ECOLI
PSORTswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YCIK_ECOLI
PfamPF00106http://pfam.xfam.org/family/PF00106
Phobiusswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YCIK_ECOLI
PhylomeDBP31808http://phylomedb.org/?seqid=P31808
ProteinModelPortalP31808http://www.proteinmodelportal.org/query/uniprot/P31808
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed1885549http://www.ncbi.nlm.nih.gov/pubmed/1885549
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415787http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415787
RefSeqWP_000559286http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000559286
SMRP31808http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P31808
STRING511145.b1271http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1271&targetmode=cogs
SUPFAMSSF51735http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF51735
UniProtKB-ACP31808http://www.uniprot.org/uniprot/P31808
UniProtKBYCIK_ECOLIhttp://www.uniprot.org/uniprot/YCIK_ECOLI
chargeswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YCIK_ECOLI
eggNOGCOG1028http://eggnogapi.embl.de/nog_data/html/tree/COG1028
eggNOGENOG4105UBKhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105UBK
epestfindswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YCIK_ECOLI
garnierswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YCIK_ECOLI
helixturnhelixswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YCIK_ECOLI
hmomentswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YCIK_ECOLI
iepswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YCIK_ECOLI
inforesidueswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YCIK_ECOLI
octanolswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YCIK_ECOLI
pepcoilswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YCIK_ECOLI
pepdigestswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YCIK_ECOLI
pepinfoswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YCIK_ECOLI
pepnetswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YCIK_ECOLI
pepstatsswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YCIK_ECOLI
pepwheelswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YCIK_ECOLI
pepwindowswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YCIK_ECOLI
sigcleaveswissprot:YCIK_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YCIK_ECOLI
DataBaseIDURL or Descriptions
# AltNameLIVH_ECOLILIV-I protein H
# BioGrid426249423
# EcoGeneEG10538livH
# FUNCTIONLIVH_ECOLIPart of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0015658branched-chain amino acid transmembrane transporter activity; IMP:EcoCyc.
# GO_processGO:0015803branched-chain amino acid transport; IMP:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# InterProIPR001851ABC_transp_permease
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko02000 M00237 Branched-chain amino acid transport system
# KEGG_Briteko02000 Transporters
# KEGG_Pathwayko02010ABC transporters
# OrganismLIVH_ECOLIEscherichia coli (strain K12)
# PATRIC32122356VBIEscCol129921_3555
# PIRS47676QRECLH
# PfamPF02653BPD_transp_2
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameLIVH_ECOLIHigh-affinity branched-chain amino acid transport system permease protein LivH
# RefSeqNP_417914NC_000913.3
# RefSeqWP_001295111NZ_LN832404.1
# SIMILARITYBelongs to the binding-protein-dependent transport system permease family. LivHM subfamily. {ECO0000305}.
# SUBCELLULAR LOCATIONLIVH_ECOLICell inner membrane; Multi-pass membrane protein.
# TCDB3.A.1.4the atp-binding cassette (abc) superfamily
# eggNOGCOG0559LUCA
# eggNOGENOG4105C32Bacteria
BLASTswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:LIVH_ECOLI
BioCycECOL316407:JW3422-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3422-MONOMER
BioCycEcoCyc:LIVH-MONOMERhttp://biocyc.org/getid?id=EcoCyc:LIVH-MONOMER
BioCycMetaCyc:LIVH-MONOMERhttp://biocyc.org/getid?id=MetaCyc:LIVH-MONOMER
COGCOG0559http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0559
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/22.13.2576http://dx.doi.org/10.1093/nar/22.13.2576
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLJ05516http://www.ebi.ac.uk/ena/data/view/J05516
EMBLU00039http://www.ebi.ac.uk/ena/data/view/U00039
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB0533http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0533
EcoGeneEG10538http://www.ecogene.org/geneInfo.php?eg_id=EG10538
EnsemblBacteriaAAC76482http://www.ensemblgenomes.org/id/AAC76482
EnsemblBacteriaAAC76482http://www.ensemblgenomes.org/id/AAC76482
EnsemblBacteriaBAE77836http://www.ensemblgenomes.org/id/BAE77836
EnsemblBacteriaBAE77836http://www.ensemblgenomes.org/id/BAE77836
EnsemblBacteriaBAE77836http://www.ensemblgenomes.org/id/BAE77836
EnsemblBacteriab3457http://www.ensemblgenomes.org/id/b3457
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0015658http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015658
GO_processGO:0015803http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015803
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GeneID947965http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947965
HOGENOMHOG000202530http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000202530&db=HOGENOM6
InParanoidP0AEX7http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0AEX7
InterProIPR001851http://www.ebi.ac.uk/interpro/entry/IPR001851
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW3422http://www.genome.jp/dbget-bin/www_bget?ecj:JW3422
KEGG_Geneeco:b3457http://www.genome.jp/dbget-bin/www_bget?eco:b3457
KEGG_OrthologyKO:K01997http://www.genome.jp/dbget-bin/www_bget?KO:K01997
KEGG_Pathwayko02010http://www.genome.jp/kegg-bin/show_pathway?ko02010
OMALMYYGVAhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=LMYYGVA
PSORT-Bswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:LIVH_ECOLI
PSORT2swissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:LIVH_ECOLI
PSORTswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:LIVH_ECOLI
PfamPF02653http://pfam.xfam.org/family/PF02653
Phobiusswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:LIVH_ECOLI
PhylomeDBP0AEX7http://phylomedb.org/?seqid=P0AEX7
ProteinModelPortalP0AEX7http://www.proteinmodelportal.org/query/uniprot/P0AEX7
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2195019http://www.ncbi.nlm.nih.gov/pubmed/2195019
PubMed3009409http://www.ncbi.nlm.nih.gov/pubmed/3009409
PubMed8041620http://www.ncbi.nlm.nih.gov/pubmed/8041620
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_417914http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417914
RefSeqWP_001295111http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001295111
STRING511145.b3457http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3457&targetmode=cogs
STRINGCOG0559http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0559&targetmode=cogs
TCDB3.A.1.4http://www.tcdb.org/search/result.php?tc=3.A.1.4
UniProtKB-ACP0AEX7http://www.uniprot.org/uniprot/P0AEX7
UniProtKBLIVH_ECOLIhttp://www.uniprot.org/uniprot/LIVH_ECOLI
chargeswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:LIVH_ECOLI
eggNOGCOG0559http://eggnogapi.embl.de/nog_data/html/tree/COG0559
eggNOGENOG4105C32http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105C32
epestfindswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:LIVH_ECOLI
garnierswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:LIVH_ECOLI
helixturnhelixswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:LIVH_ECOLI
hmomentswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:LIVH_ECOLI
iepswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:LIVH_ECOLI
inforesidueswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:LIVH_ECOLI
octanolswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:LIVH_ECOLI
pepcoilswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:LIVH_ECOLI
pepdigestswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:LIVH_ECOLI
pepinfoswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:LIVH_ECOLI
pepnetswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:LIVH_ECOLI
pepstatsswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:LIVH_ECOLI
pepwheelswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:LIVH_ECOLI
pepwindowswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:LIVH_ECOLI
sigcleaveswissprot:LIVH_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:LIVH_ECOLI
DataBaseIDURL or Descriptions
# BioGrid4261046249
# EcoGeneEG11977fliR
# FUNCTIONFLIR_ECOLIRole in flagellar biosynthesis.
# GO_componentGO:0005622intracellular; IEA:GOC.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0009425bacterial-type flagellum basal body; IEA:UniProtKB-SubCell.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_processGO:0006605protein targeting; IEA:InterPro.
# GO_processGO:0044780bacterial-type flagellum assembly; IEA:InterPro.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005622intracellular
# GOslim_componentGO:0005886plasma membrane
# GOslim_processGO:0006605protein targeting
# GOslim_processGO:0022607cellular component assembly
# IntActP331354
# InterProIPR002010T3SS_IM_R
# InterProIPR006303FliR
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko02035 Bacterial motility proteins
# KEGG_Briteko02044 Secretion system
# KEGG_Pathwayko02040Flagellar assembly
# OrganismFLIR_ECOLIEscherichia coli (strain K12)
# PATRIC32119229VBIEscCol129921_2029
# PIRC64959C64959
# PRINTSPR00953TYPE3IMRPROT
# PfamPF01311Bac_export_1
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameFLIR_ECOLIFlagellar biosynthetic protein FliR
# RefSeqNP_416460NC_000913.3
# RefSeqWP_000942319NZ_LN832404.1
# SIMILARITYBelongs to the FliR/MopE/SpaR family. {ECO0000305}.
# SUBCELLULAR LOCATIONFLIR_ECOLICell inner membrane {ECO 0000269|PubMed 15919996}; Multi-pass membrane protein {ECO 0000269|PubMed 15919996}. Bacterial flagellum basal body {ECO 0000269|PubMed 15919996}.
# TIGRFAMsTIGR01400fliR
# eggNOGCOG1684LUCA
# eggNOGENOG4105D19Bacteria
BLASTswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:FLIR_ECOLI
BioCycECOL316407:JW1934-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1934-MONOMER
BioCycEcoCyc:EG11977-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11977-MONOMER
COGCOG1684http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1684
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.379http://dx.doi.org/10.1093/dnares/3.6.379
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLL22182http://www.ebi.ac.uk/ena/data/view/L22182
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB1920http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1920
EcoGeneEG11977http://www.ecogene.org/geneInfo.php?eg_id=EG11977
EnsemblBacteriaAAC75017http://www.ensemblgenomes.org/id/AAC75017
EnsemblBacteriaAAC75017http://www.ensemblgenomes.org/id/AAC75017
EnsemblBacteriaBAA15775http://www.ensemblgenomes.org/id/BAA15775
EnsemblBacteriaBAA15775http://www.ensemblgenomes.org/id/BAA15775
EnsemblBacteriaBAA15775http://www.ensemblgenomes.org/id/BAA15775
EnsemblBacteriab1950http://www.ensemblgenomes.org/id/b1950
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005622http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005622
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0009425http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009425
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_processGO:0006605http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006605
GO_processGO:0044780http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044780
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005622http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005622
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_processGO:0006605http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006605
GOslim_processGO:0022607http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022607
GeneID946464http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946464
HOGENOMHOG000253545http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000253545&db=HOGENOM6
InParanoidP33135http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P33135
IntActP33135http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P33135*
InterProIPR002010http://www.ebi.ac.uk/interpro/entry/IPR002010
InterProIPR006303http://www.ebi.ac.uk/interpro/entry/IPR006303
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko02035http://www.genome.jp/dbget-bin/www_bget?ko02035
KEGG_Briteko02044http://www.genome.jp/dbget-bin/www_bget?ko02044
KEGG_Geneecj:JW1934http://www.genome.jp/dbget-bin/www_bget?ecj:JW1934
KEGG_Geneeco:b1950http://www.genome.jp/dbget-bin/www_bget?eco:b1950
KEGG_OrthologyKO:K02421http://www.genome.jp/dbget-bin/www_bget?KO:K02421
KEGG_Pathwayko02040http://www.genome.jp/kegg-bin/show_pathway?ko02040
OMANLAFGVMhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=NLAFGVM
PRINTSPR00953http://umber.sbs.man.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&prints_accn=PR00953
PSORT-Bswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:FLIR_ECOLI
PSORT2swissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:FLIR_ECOLI
PSORTswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:FLIR_ECOLI
PfamPF01311http://pfam.xfam.org/family/PF01311
Phobiusswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:FLIR_ECOLI
PhylomeDBP33135http://phylomedb.org/?seqid=P33135
ProteinModelPortalP33135http://www.proteinmodelportal.org/query/uniprot/P33135
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8282695http://www.ncbi.nlm.nih.gov/pubmed/8282695
PubMed9097040http://www.ncbi.nlm.nih.gov/pubmed/9097040
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416460http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416460
RefSeqWP_000942319http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000942319
STRING511145.b1950http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1950&targetmode=cogs
STRINGCOG1684http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1684&targetmode=cogs
TIGRFAMsTIGR01400http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR01400
UniProtKB-ACP33135http://www.uniprot.org/uniprot/P33135
UniProtKBFLIR_ECOLIhttp://www.uniprot.org/uniprot/FLIR_ECOLI
chargeswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:FLIR_ECOLI
eggNOGCOG1684http://eggnogapi.embl.de/nog_data/html/tree/COG1684
eggNOGENOG4105D19http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105D19
epestfindswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:FLIR_ECOLI
garnierswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:FLIR_ECOLI
helixturnhelixswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:FLIR_ECOLI
hmomentswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:FLIR_ECOLI
iepswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:FLIR_ECOLI
inforesidueswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:FLIR_ECOLI
octanolswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:FLIR_ECOLI
pepcoilswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:FLIR_ECOLI
pepdigestswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:FLIR_ECOLI
pepinfoswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:FLIR_ECOLI
pepnetswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:FLIR_ECOLI
pepstatsswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:FLIR_ECOLI
pepwheelswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:FLIR_ECOLI
pepwindowswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:FLIR_ECOLI
sigcleaveswissprot:FLIR_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:FLIR_ECOLI
DataBaseIDURL or Descriptions
# AltNameDEOB_ECOLIPhosphodeoxyribomutase
# BRENDA5.4.22026
# BioGrid42631608
# CATALYTIC ACTIVITYDEOB_ECOLI2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy- alpha-D-ribose 5-phosphate.
# CATALYTIC ACTIVITYDEOB_ECOLIAlpha-D-ribose 1-phosphate = D-ribose 5- phosphate.
# COFACTORDEOB_ECOLIName=Mn(2+); Xref=ChEBI CHEBI 29035; Evidence={ECO 0000305}; Note=Binds 1 or 2 manganese ions. {ECO 0000305};
# EcoGeneEG10220deoB
# FUNCTIONDEOB_ECOLIPhosphotransfer between the C1 and C5 carbon atoms of pentose.
# GO_componentGO:0005829cytosol; IDA:EcoCyc.
# GO_functionGO:0000287magnesium ion binding; IEA:InterPro.
# GO_functionGO:0008973phosphopentomutase activity; IDA:EcoCyc.
# GO_functionGO:0030145manganese ion binding; IEA:UniProtKB-HAMAP.
# GO_processGO:00060155-phosphoribose 1-diphosphate biosynthetic process; IEA:UniProtKB-UniPathway.
# GO_processGO:0006974cellular response to DNA damage stimulus; IEP:EcoliWiki.
# GO_processGO:0009264deoxyribonucleotide catabolic process; IEA:UniProtKB-HAMAP.
# GO_processGO:0043094cellular metabolic compound salvage; IEA:InterPro.
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0016853isomerase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006950response to stress
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034655nucleobase-containing compound catabolic process
# GOslim_processGO:0044281small molecule metabolic process
# Gene3D3.30.70.1250-; 1.
# Gene3D3.40.720.10-; 2.
# HAMAPMF_00740Phosphopentomut
# IntActP0A6K66
# InterProIPR006124Metalloenzyme
# InterProIPR010045DeoB
# InterProIPR017849Alkaline_Pase-like_a/b/a
# InterProIPR017850Alkaline_phosphatase_core
# InterProIPR024052Phosphopentomutase_DeoB_cap
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00030Pentose phosphate pathway
# KEGG_Pathwayko00230Purine metabolism
# OrganismDEOB_ECOLIEscherichia coli (strain K12)
# PATHWAYMetabolic intermediate biosynthesis; 5-phospho-alpha-D- ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1- diphosphate from D-ribose 5-phosphate (route II) step 1/3.
# PATRIC32124382VBIEscCol129921_4531
# PIRS56607S56607
# PIRSFPIRSF001491Ppentomutase
# PfamPF01676Metalloenzyme
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameDEOB_ECOLIPhosphopentomutase
# RefSeqNP_418800NC_000913.3
# RefSeqWP_000816471NZ_LN832404.1
# SIMILARITYBelongs to the phosphopentomutase family. {ECO0000305}.
# SUBCELLULAR LOCATIONDEOB_ECOLICytoplasm.
# SUPFAMSSF143856SSF143856
# SUPFAMSSF53649SSF53649; 2
# TIGRFAMsTIGR01696deoB
# UniPathwayUPA00087UER00173
# eggNOGCOG1015LUCA
# eggNOGENOG4105CZGBacteria
BLASTswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:DEOB_ECOLI
BioCycECOL316407:JW4346-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW4346-MONOMER
BioCycEcoCyc:PPENTOMUT-MONOMERhttp://biocyc.org/getid?id=EcoCyc:PPENTOMUT-MONOMER
BioCycMetaCyc:PPENTOMUT-MONOMERhttp://biocyc.org/getid?id=MetaCyc:PPENTOMUT-MONOMER
COGCOG1015http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1015
DIPDIP-48057Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-48057N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1074/mcp.M800187-MCP200http://dx.doi.org/10.1074/mcp.M800187-MCP200
DOI10.1093/nar/12.13.5211http://dx.doi.org/10.1093/nar/12.13.5211
DOI10.1093/nar/23.12.2105http://dx.doi.org/10.1093/nar/23.12.2105
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:5.4.2.7http://www.genome.jp/dbget-bin/www_bget?EC:5.4.2.7
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU14003http://www.ebi.ac.uk/ena/data/view/U14003
EMBLX00742http://www.ebi.ac.uk/ena/data/view/X00742
ENZYME5.4.2.7http://enzyme.expasy.org/EC/5.4.2.7
EchoBASEEB0216http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0216
EcoGeneEG10220http://www.ecogene.org/geneInfo.php?eg_id=EG10220
EnsemblBacteriaAAC77336http://www.ensemblgenomes.org/id/AAC77336
EnsemblBacteriaAAC77336http://www.ensemblgenomes.org/id/AAC77336
EnsemblBacteriaBAE78372http://www.ensemblgenomes.org/id/BAE78372
EnsemblBacteriaBAE78372http://www.ensemblgenomes.org/id/BAE78372
EnsemblBacteriaBAE78372http://www.ensemblgenomes.org/id/BAE78372
EnsemblBacteriab4383http://www.ensemblgenomes.org/id/b4383
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_functionGO:0000287http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0000287
GO_functionGO:0008973http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008973
GO_functionGO:0030145http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030145
GO_processGO:0006015http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006015
GO_processGO:0006974http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006974
GO_processGO:0009264http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009264
GO_processGO:0043094http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043094
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0016853http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016853
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006950http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006950
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034655http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034655
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
Gene3D3.30.70.1250http://www.cathdb.info/version/latest/superfamily/3.30.70.1250
Gene3D3.40.720.10http://www.cathdb.info/version/latest/superfamily/3.40.720.10
GeneID948910http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=948910
HAMAPMF_00740http://hamap.expasy.org/unirule/MF_00740
HOGENOMHOG000008159http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000008159&db=HOGENOM6
InParanoidP0A6K6http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P0A6K6
IntActP0A6K6http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P0A6K6*
IntEnz5.4.2.7http://www.ebi.ac.uk/intenz/query?cmd=Search&q=5.4.2.7
InterProIPR006124http://www.ebi.ac.uk/interpro/entry/IPR006124
InterProIPR010045http://www.ebi.ac.uk/interpro/entry/IPR010045
InterProIPR017849http://www.ebi.ac.uk/interpro/entry/IPR017849
InterProIPR017850http://www.ebi.ac.uk/interpro/entry/IPR017850
InterProIPR024052http://www.ebi.ac.uk/interpro/entry/IPR024052
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW4346http://www.genome.jp/dbget-bin/www_bget?ecj:JW4346
KEGG_Geneeco:b4383http://www.genome.jp/dbget-bin/www_bget?eco:b4383
KEGG_OrthologyKO:K01839http://www.genome.jp/dbget-bin/www_bget?KO:K01839
KEGG_Pathwayko00030http://www.genome.jp/kegg-bin/show_pathway?ko00030
KEGG_Pathwayko00230http://www.genome.jp/kegg-bin/show_pathway?ko00230
KEGG_Reactionrn:R01057http://www.genome.jp/dbget-bin/www_bget?rn:R01057
KEGG_Reactionrn:R02749http://www.genome.jp/dbget-bin/www_bget?rn:R02749
OMAYLGNCHAhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=YLGNCHA
PSORT-Bswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:DEOB_ECOLI
PSORT2swissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:DEOB_ECOLI
PSORTswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:DEOB_ECOLI
PfamPF01676http://pfam.xfam.org/family/PF01676
Phobiusswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:DEOB_ECOLI
PhylomeDBP0A6K6http://phylomedb.org/?seqid=P0A6K6
ProteinModelPortalP0A6K6http://www.proteinmodelportal.org/query/uniprot/P0A6K6
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed18723842http://www.ncbi.nlm.nih.gov/pubmed/18723842
PubMed6087276http://www.ncbi.nlm.nih.gov/pubmed/6087276
PubMed7610040http://www.ncbi.nlm.nih.gov/pubmed/7610040
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_418800http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_418800
RefSeqWP_000816471http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000816471
SMRP0A6K6http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P0A6K6
STRING511145.b4383http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b4383&targetmode=cogs
STRINGCOG1015http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1015&targetmode=cogs
SUPFAMSSF143856http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF143856
SUPFAMSSF53649http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF53649
TIGRFAMsTIGR01696http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR01696
UniProtKB-ACP0A6K6http://www.uniprot.org/uniprot/P0A6K6
UniProtKBDEOB_ECOLIhttp://www.uniprot.org/uniprot/DEOB_ECOLI
chargeswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:DEOB_ECOLI
eggNOGCOG1015http://eggnogapi.embl.de/nog_data/html/tree/COG1015
eggNOGENOG4105CZGhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105CZG
epestfindswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:DEOB_ECOLI
garnierswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:DEOB_ECOLI
helixturnhelixswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:DEOB_ECOLI
hmomentswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:DEOB_ECOLI
iepswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:DEOB_ECOLI
inforesidueswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:DEOB_ECOLI
octanolswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:DEOB_ECOLI
pepcoilswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:DEOB_ECOLI
pepdigestswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:DEOB_ECOLI
pepinfoswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:DEOB_ECOLI
pepnetswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:DEOB_ECOLI
pepstatsswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:DEOB_ECOLI
pepwheelswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:DEOB_ECOLI
pepwindowswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:DEOB_ECOLI
sigcleaveswissprot:DEOB_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:DEOB_ECOLI
DataBaseIDURL or Descriptions
# BioGrid42609537
# EcoGeneEG14275ycgY
# IntActP7601210
# OrganismYCGY_ECOLIEscherichia coli (strain K12)
# PATRIC32117640VBIEscCol129921_1242
# PIRA64866A64866
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYCGY_ECOLIUncharacterized protein YcgY
# RefSeqNP_415714NC_000913.3
# RefSeqWP_000615067NZ_LN832404.1
BLASTswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YCGY_ECOLI
BioCycECOL316407:JW1185-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1185-MONOMER
BioCycEcoCyc:G6625-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6625-MONOMER
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB4023http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB4023
EcoGeneEG14275http://www.ecogene.org/geneInfo.php?eg_id=EG14275
EnsemblBacteriaAAC74280http://www.ensemblgenomes.org/id/AAC74280
EnsemblBacteriaAAC74280http://www.ensemblgenomes.org/id/AAC74280
EnsemblBacteriaBAE76391http://www.ensemblgenomes.org/id/BAE76391
EnsemblBacteriaBAE76391http://www.ensemblgenomes.org/id/BAE76391
EnsemblBacteriaBAE76391http://www.ensemblgenomes.org/id/BAE76391
EnsemblBacteriab1196http://www.ensemblgenomes.org/id/b1196
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GeneID945761http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945761
HOGENOMHOG000009434http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000009434&db=HOGENOM6
IntActP76012http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P76012*
KEGG_Geneecj:JW1185http://www.genome.jp/dbget-bin/www_bget?ecj:JW1185
KEGG_Geneeco:b1196http://www.genome.jp/dbget-bin/www_bget?eco:b1196
OMAQRRCKSPhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=QRRCKSP
PSORT-Bswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YCGY_ECOLI
PSORT2swissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YCGY_ECOLI
PSORTswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YCGY_ECOLI
Phobiusswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YCGY_ECOLI
ProteinModelPortalP76012http://www.proteinmodelportal.org/query/uniprot/P76012
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415714http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415714
RefSeqWP_000615067http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000615067
STRING511145.b1196http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1196&targetmode=cogs
UniProtKB-ACP76012http://www.uniprot.org/uniprot/P76012
UniProtKBYCGY_ECOLIhttp://www.uniprot.org/uniprot/YCGY_ECOLI
chargeswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YCGY_ECOLI
epestfindswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YCGY_ECOLI
garnierswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YCGY_ECOLI
helixturnhelixswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YCGY_ECOLI
hmomentswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YCGY_ECOLI
iepswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YCGY_ECOLI
inforesidueswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YCGY_ECOLI
octanolswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YCGY_ECOLI
pepcoilswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YCGY_ECOLI
pepdigestswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YCGY_ECOLI
pepinfoswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YCGY_ECOLI
pepnetswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YCGY_ECOLI
pepstatsswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YCGY_ECOLI
pepwheelswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YCGY_ECOLI
pepwindowswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YCGY_ECOLI
sigcleaveswissprot:YCGY_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YCGY_ECOLI
DataBaseIDURL or Descriptions
# AltNameMolybdenum cofactor biosynthesis protein A {ECO:0000255|HAMAP-RuleMF_01225}
# BioGrid42599515
# CATALYTIC ACTIVITYGTP + S-adenosyl-L-methionine + reduced electron acceptor = (8S)-3',8-cyclo-7,8-dihydroguanosine 5'- triphosphate + 5'-deoxyadenosine + L-methionine + oxidized electron acceptor. {ECO:0000255|HAMAP-RuleMF_01225}.
# COFACTORMOAA_ECOLIName=[4Fe-4S] cluster; Xref=ChEBI CHEBI 49883; Evidence={ECO 0000255|HAMAP-Rule MF_01225}; Note=Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate. {ECO 0000255|HAMAP-Rule MF_01225};
# EcoGeneEG11595moaA
# FUNCTIONMOAA_ECOLICatalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. {ECO 0000255|HAMAP- Rule MF_01225}.
# FUNCTIONMOAA_ECOLICatalyzes, together with MoaC, the conversion of 5'-GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z).
# GO_componentGO:0019008molybdopterin synthase complex; IEA:InterPro.
# GO_functionGO:0005525GTP binding; IEA:UniProtKB-KW.
# GO_functionGO:0016829lyase activity; IEA:UniProtKB-KW.
# GO_functionGO:0046872metal ion binding; IEA:UniProtKB-KW.
# GO_functionGO:00515394 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
# GO_processGO:0006777Mo-molybdopterin cofactor biosynthetic process; IEA:UniProtKB-HAMAP.
# GO_processGO:0009408response to heat; IMP:EcoCyc.
# GO_processGO:0032324molybdopterin cofactor biosynthetic process; IMP:EcoCyc.
# GOslim_componentGO:0043234protein complex
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0016829lyase activity
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006950response to stress
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# GOslim_processGO:0044281small molecule metabolic process
# GOslim_processGO:0051186cofactor metabolic process
# Gene3D3.20.20.70-; 1.
# HAMAPMF_01225_BMoaA_B
# INDUCTIONMOAA_ECOLIBy anaerobiosis, repressed by the molybdenum cofactor.
# IntActP3074513
# InterProIPR000385MoaA_NifB_PqqE_Fe-S-bd_CS
# InterProIPR006638Elp3/MiaB/NifB
# InterProIPR007197rSAM
# InterProIPR010505Mob_synth_C
# InterProIPR013483MoaA
# InterProIPR013785Aldolase_TIM
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Pathwayko00790Folate biosynthesis
# KEGG_Pathwayko04122Sulfur relay system
# OrganismMOAA_ECOLIEscherichia coli (strain K12)
# PATHWAYCofactor biosynthesis; molybdopterin biosynthesis. {ECO:0000255|HAMAP-RuleMF_01225}.
# PATRIC32116763VBIEscCol129921_0807
# PIRS31879S31879
# PROSITEPS01305MOAA_NIFB_PQQE
# PfamPF04055Radical_SAM
# PfamPF06463Mob_synth_C
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameGTP 3',8-cyclase {ECO:0000255|HAMAP-RuleMF_01225}
# RefSeqNP_415302NC_000913.3
# RefSeqWP_001350494NZ_LN832404.1
# SIMILARITYBelongs to the radical SAM superfamily. MoaA family. {ECO:0000255|HAMAP-RuleMF_01225}.
# SMARTSM00729Elp3
# SUBUNITMonomer and homodimer. {ECO:0000255|HAMAP-RuleMF_01225}.
# TIGRFAMsTIGR02666moaA
# eggNOGCOG2896LUCA
# eggNOGENOG4105CM1Bacteria
BLASTswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:MOAA_ECOLI
BioCycECOL316407:JW0764-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0764-MONOMER
BioCycEcoCyc:EG11595-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11595-MONOMER
BioCycMetaCyc:EG11595-MONOMERhttp://biocyc.org/getid?id=MetaCyc:EG11595-MONOMER
COGCOG2896http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2896
DIPDIP-10228Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-10228N
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.3.137http://dx.doi.org/10.1093/dnares/3.3.137
DOI10.1111/j.1365-2958.1993.tb01652.xhttp://dx.doi.org/10.1111/j.1365-2958.1993.tb01652.x
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:4.1.99.22 {ECO:0000255|HAMAP-Rule:MF_01225}http://www.genome.jp/dbget-bin/www_bget?EC:4.1.99.22 {ECO:0000255|HAMAP-Rule:MF_01225}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX70420http://www.ebi.ac.uk/ena/data/view/X70420
ENZYME4.1.99.22 {ECO:0000255|HAMAP-Rule:MF_01225}http://enzyme.expasy.org/EC/4.1.99.22 {ECO:0000255|HAMAP-Rule:MF_01225}
EchoBASEEB1552http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1552
EcoGeneEG11595http://www.ecogene.org/geneInfo.php?eg_id=EG11595
EnsemblBacteriaAAC73868http://www.ensemblgenomes.org/id/AAC73868
EnsemblBacteriaAAC73868http://www.ensemblgenomes.org/id/AAC73868
EnsemblBacteriaBAA35439http://www.ensemblgenomes.org/id/BAA35439
EnsemblBacteriaBAA35439http://www.ensemblgenomes.org/id/BAA35439
EnsemblBacteriaBAA35439http://www.ensemblgenomes.org/id/BAA35439
EnsemblBacteriab0781http://www.ensemblgenomes.org/id/b0781
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0019008http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0019008
GO_functionGO:0005525http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005525
GO_functionGO:0016829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016829
GO_functionGO:0046872http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046872
GO_functionGO:0051539http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0051539
GO_processGO:0006777http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006777
GO_processGO:0009408http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009408
GO_processGO:0032324http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0032324
GOslim_componentGO:0043234http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043234
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0016829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016829
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006950http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006950
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
GOslim_processGO:0051186http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0051186
Gene3D3.20.20.70http://www.cathdb.info/version/latest/superfamily/3.20.20.70
GeneID945392http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945392
HAMAPMF_01225_Bhttp://hamap.expasy.org/unirule/MF_01225_B
HOGENOMHOG000228682http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000228682&db=HOGENOM6
InParanoidP30745http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P30745
IntActP30745http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P30745*
IntEnz4.1.99.22 {ECO:0000255|HAMAP-Rule:MF_01225}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=4.1.99.22 {ECO:0000255|HAMAP-Rule:MF_01225}
InterProIPR000385http://www.ebi.ac.uk/interpro/entry/IPR000385
InterProIPR006638http://www.ebi.ac.uk/interpro/entry/IPR006638
InterProIPR007197http://www.ebi.ac.uk/interpro/entry/IPR007197
InterProIPR010505http://www.ebi.ac.uk/interpro/entry/IPR010505
InterProIPR013483http://www.ebi.ac.uk/interpro/entry/IPR013483
InterProIPR013785http://www.ebi.ac.uk/interpro/entry/IPR013785
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Geneecj:JW0764http://www.genome.jp/dbget-bin/www_bget?ecj:JW0764
KEGG_Geneeco:b0781http://www.genome.jp/dbget-bin/www_bget?eco:b0781
KEGG_OrthologyKO:K03639http://www.genome.jp/dbget-bin/www_bget?KO:K03639
KEGG_Pathwayko00790http://www.genome.jp/kegg-bin/show_pathway?ko00790
KEGG_Pathwayko04122http://www.genome.jp/kegg-bin/show_pathway?ko04122
KEGG_Reactionrn:R09394http://www.genome.jp/dbget-bin/www_bget?rn:R09394
MINTMINT-1229909http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1229909
OMAGWIHQIRhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=GWIHQIR
PROSITEPS01305http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS01305
PSORT-Bswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:MOAA_ECOLI
PSORT2swissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:MOAA_ECOLI
PSORTswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:MOAA_ECOLI
PfamPF04055http://pfam.xfam.org/family/PF04055
PfamPF06463http://pfam.xfam.org/family/PF06463
Phobiusswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:MOAA_ECOLI
PhylomeDBP30745http://phylomedb.org/?seqid=P30745
ProteinModelPortalP30745http://www.proteinmodelportal.org/query/uniprot/P30745
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed8361352http://www.ncbi.nlm.nih.gov/pubmed/8361352
PubMed8905232http://www.ncbi.nlm.nih.gov/pubmed/8905232
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415302http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415302
RefSeqWP_001350494http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001350494
SMARTSM00729http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00729
SMRP30745http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P30745
STRING511145.b0781http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0781&targetmode=cogs
STRINGCOG2896http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG2896&targetmode=cogs
TIGRFAMsTIGR02666http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR02666
UniProtKB-ACP30745http://www.uniprot.org/uniprot/P30745
UniProtKBMOAA_ECOLIhttp://www.uniprot.org/uniprot/MOAA_ECOLI
chargeswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:MOAA_ECOLI
eggNOGCOG2896http://eggnogapi.embl.de/nog_data/html/tree/COG2896
eggNOGENOG4105CM1http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105CM1
epestfindswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:MOAA_ECOLI
garnierswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:MOAA_ECOLI
helixturnhelixswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:MOAA_ECOLI
hmomentswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:MOAA_ECOLI
iepswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:MOAA_ECOLI
inforesidueswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:MOAA_ECOLI
octanolswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:MOAA_ECOLI
pepcoilswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:MOAA_ECOLI
pepdigestswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:MOAA_ECOLI
pepinfoswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:MOAA_ECOLI
pepnetswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:MOAA_ECOLI
pepstatsswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:MOAA_ECOLI
pepwheelswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:MOAA_ECOLI
pepwindowswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:MOAA_ECOLI
sigcleaveswissprot:MOAA_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:MOAA_ECOLI
DataBaseIDURL or Descriptions
# BRENDA1.2.1.392026
# BioGrid426181311
# CATALYTIC ACTIVITYFEAB_ECOLIPhenylacetaldehyde + NAD(+) + H(2)O = phenylacetate + NADH.
# EcoGeneEG13179feaB
# FUNCTIONFEAB_ECOLIActs almost equally well on phenylacetaldehyde, 4- hydroxyphenylacetaldehyde and 3,4-dihydroxyphenylacetaldehyde.
# GO_functionGO:0008957phenylacetaldehyde dehydrogenase activity; IDA:EcoliWiki.
# GO_functionGO:0016491oxidoreductase activity; IDA:EcoliWiki.
# GO_functionGO:00471064-hydroxyphenylacetaldehyde dehydrogenase activity; IDA:EcoliWiki.
# GO_processGO:0006559L-phenylalanine catabolic process; IEA:UniProtKB-UniPathway.
# GO_processGO:0009435NAD biosynthetic process; IDA:EcoliWiki.
# GO_processGO:00461964-nitrophenol catabolic process; IDA:EcoliWiki.
# GOslim_functionGO:0016491oxidoreductase activity
# GOslim_processGO:0006520cellular amino acid metabolic process
# GOslim_processGO:0009056catabolic process
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0034641cellular nitrogen compound metabolic process
# GOslim_processGO:0044281small molecule metabolic process
# GOslim_processGO:0051186cofactor metabolic process
# Gene3D3.40.309.10-; 1.
# Gene3D3.40.605.10-; 1.
# InterProIPR015590Aldehyde_DH_dom
# InterProIPR016160Ald_DH_CS_CYS
# InterProIPR016161Ald_DH/histidinol_DH
# InterProIPR016162Ald_DH_N
# InterProIPR016163Ald_DH_C
# InterProIPR029510Ald_DH_CS_GLU
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko01000 Enzymes
# KEGG_Pathwayko00360Phenylalanine metabolism
# KEGG_Pathwayko00643Styrene degradation
# MISCELLANEOUSFEAB_ECOLICan also use NADP, but prefers NAD.
# OrganismFEAB_ECOLIEscherichia coli (strain K12)
# PATHWAYAmino-acid degradation; L-phenylalanine degradation; phenylacetate from L-phenylalanine step 3/3.
# PATRIC32118056VBIEscCol129921_1448
# PIRD64889D64889
# PROSITEPS00070ALDEHYDE_DEHYDR_CYS
# PROSITEPS00687ALDEHYDE_DEHYDR_GLU
# PfamPF00171Aldedh
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameFEAB_ECOLIPhenylacetaldehyde dehydrogenase
# RefSeqNP_415903NC_000913.3
# RefSeqWP_000138615NZ_LN832404.1
# SIMILARITYBelongs to the aldehyde dehydrogenase family. {ECO0000305}.
# SUBUNITFEAB_ECOLIHomodimer.
# SUPFAMSSF53720SSF53720
# UniPathwayUPA00139UER00724
# eggNOGCOG1012LUCA
# eggNOGENOG4105C26Bacteria
BLASTswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:FEAB_ECOLI
BioCycECOL316407:JW1380-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW1380-MONOMER
BioCycEcoCyc:PHENDEHYD-MONOMERhttp://biocyc.org/getid?id=EcoCyc:PHENDEHYD-MONOMER
BioCycMetaCyc:PHENDEHYD-MONOMERhttp://biocyc.org/getid?id=MetaCyc:PHENDEHYD-MONOMER
COGCOG1012http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1012
DIPDIP-9581Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9581N
DOI10.1016/S0014-5793(97)00228-7http://dx.doi.org/10.1016/S0014-5793(97)00228-7
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/dnares/3.6.363http://dx.doi.org/10.1093/dnares/3.6.363
DOI10.1099/00221287-143-2-513http://dx.doi.org/10.1099/00221287-143-2-513
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:1.2.1.39http://www.genome.jp/dbget-bin/www_bget?EC:1.2.1.39
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLD23670http://www.ebi.ac.uk/ena/data/view/D23670
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLX97453http://www.ebi.ac.uk/ena/data/view/X97453
EMBLX99402http://www.ebi.ac.uk/ena/data/view/X99402
ENZYME1.2.1.39http://enzyme.expasy.org/EC/1.2.1.39
EchoBASEEB2971http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2971
EcoGeneEG13179http://www.ecogene.org/geneInfo.php?eg_id=EG13179
EnsemblBacteriaAAC74467http://www.ensemblgenomes.org/id/AAC74467
EnsemblBacteriaAAC74467http://www.ensemblgenomes.org/id/AAC74467
EnsemblBacteriaBAA14992http://www.ensemblgenomes.org/id/BAA14992
EnsemblBacteriaBAA14992http://www.ensemblgenomes.org/id/BAA14992
EnsemblBacteriaBAA14992http://www.ensemblgenomes.org/id/BAA14992
EnsemblBacteriab1385http://www.ensemblgenomes.org/id/b1385
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_functionGO:0008957http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0008957
GO_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GO_functionGO:0047106http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0047106
GO_processGO:0006559http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006559
GO_processGO:0009435http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009435
GO_processGO:0046196http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0046196
GOslim_functionGO:0016491http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016491
GOslim_processGO:0006520http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006520
GOslim_processGO:0009056http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009056
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0034641http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0034641
GOslim_processGO:0044281http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0044281
GOslim_processGO:0051186http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0051186
Gene3D3.40.309.10http://www.cathdb.info/version/latest/superfamily/3.40.309.10
Gene3D3.40.605.10http://www.cathdb.info/version/latest/superfamily/3.40.605.10
GeneID945933http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945933
HOGENOMHOG000271505http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000271505&db=HOGENOM6
InParanoidP80668http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P80668
IntActP80668http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P80668*
IntEnz1.2.1.39http://www.ebi.ac.uk/intenz/query?cmd=Search&q=1.2.1.39
InterProIPR015590http://www.ebi.ac.uk/interpro/entry/IPR015590
InterProIPR016160http://www.ebi.ac.uk/interpro/entry/IPR016160
InterProIPR016161http://www.ebi.ac.uk/interpro/entry/IPR016161
InterProIPR016162http://www.ebi.ac.uk/interpro/entry/IPR016162
InterProIPR016163http://www.ebi.ac.uk/interpro/entry/IPR016163
InterProIPR029510http://www.ebi.ac.uk/interpro/entry/IPR029510
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Geneecj:JW1380http://www.genome.jp/dbget-bin/www_bget?ecj:JW1380
KEGG_Geneeco:b1385http://www.genome.jp/dbget-bin/www_bget?eco:b1385
KEGG_OrthologyKO:K00146http://www.genome.jp/dbget-bin/www_bget?KO:K00146
KEGG_Pathwayko00360http://www.genome.jp/kegg-bin/show_pathway?ko00360
KEGG_Pathwayko00643http://www.genome.jp/kegg-bin/show_pathway?ko00643
KEGG_Reactionrn:R02536http://www.genome.jp/dbget-bin/www_bget?rn:R02536
MINTMINT-1256983http://mint.bio.uniroma2.it/mint/search/search.do?queryType=protein&interactorAc=MINT-1256983
OMAINISRAFhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=INISRAF
PROSITEPS00070http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00070
PROSITEPS00687http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00687
PSORT-Bswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:FEAB_ECOLI
PSORT2swissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:FEAB_ECOLI
PSORTswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:FEAB_ECOLI
PfamPF00171http://pfam.xfam.org/family/PF00171
Phobiusswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:FEAB_ECOLI
PhylomeDBP80668http://phylomedb.org/?seqid=P80668
ProteinModelPortalP80668http://www.proteinmodelportal.org/query/uniprot/P80668
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9043126http://www.ncbi.nlm.nih.gov/pubmed/9043126
PubMed9097039http://www.ncbi.nlm.nih.gov/pubmed/9097039
PubMed9109378http://www.ncbi.nlm.nih.gov/pubmed/9109378
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415903http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415903
RefSeqWP_000138615http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000138615
SMRP80668http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P80668
STRING511145.b1385http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1385&targetmode=cogs
STRINGCOG1012http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1012&targetmode=cogs
SUPFAMSSF53720http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF53720
UniProtKB-ACP80668http://www.uniprot.org/uniprot/P80668
UniProtKBFEAB_ECOLIhttp://www.uniprot.org/uniprot/FEAB_ECOLI
chargeswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:FEAB_ECOLI
eggNOGCOG1012http://eggnogapi.embl.de/nog_data/html/tree/COG1012
eggNOGENOG4105C26http://eggnogapi.embl.de/nog_data/html/tree/ENOG4105C26
epestfindswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:FEAB_ECOLI
garnierswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:FEAB_ECOLI
helixturnhelixswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:FEAB_ECOLI
hmomentswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:FEAB_ECOLI
iepswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:FEAB_ECOLI
inforesidueswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:FEAB_ECOLI
octanolswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:FEAB_ECOLI
pepcoilswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:FEAB_ECOLI
pepdigestswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:FEAB_ECOLI
pepinfoswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:FEAB_ECOLI
pepnetswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:FEAB_ECOLI
pepstatsswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:FEAB_ECOLI
pepwheelswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:FEAB_ECOLI
pepwindowswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:FEAB_ECOLI
sigcleaveswissprot:FEAB_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:FEAB_ECOLI
DataBaseIDURL or Descriptions
# BioGrid4259898146
# EcoGeneEG10297fepE
# FUNCTIONFEPE_ECOLIPart of the ferric enterobactin transport system.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_functionGO:0015620ferric-enterobactin transmembrane transporter activity; IMP:EcoCyc.
# GO_processGO:0009103lipopolysaccharide biosynthetic process; IEA:InterPro.
# GO_processGO:0015685ferric-enterobactin transport; IMP:EcoCyc.
# GO_processGO:0055072iron ion homeostasis; IEA:UniProtKB-KW.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0005975carbohydrate metabolic process
# GOslim_processGO:0006629lipid metabolic process
# GOslim_processGO:0006810transport
# GOslim_processGO:0009058biosynthetic process
# GOslim_processGO:0042592homeostatic process
# INDUCTIONRepressed by H-NS, induced by LeuO. A monocistronic operon. {ECO:0000269|PubMed19429622}.
# IntActP262669
# InterProIPR003856LipoPS_biosynth
# OrganismFEPE_ECOLIEscherichia coli (strain K12)
# PATRIC32116350VBIEscCol129921_0615
# PIRS34703S34703
# PfamPF02706Wzz
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameFEPE_ECOLIFerric enterobactin transport protein FepE
# RefSeqNP_415119NC_000913.3
# RefSeqWP_000096692NZ_LN832404.1
# SIMILARITYBelongs to the WzzB/Cld/Rol family. {ECO0000305}.
# SUBCELLULAR LOCATIONFEPE_ECOLICell inner membrane; Multi-pass membrane protein.
# eggNOGCOG3765LUCA
# eggNOGENOG4108QY5Bacteria
BLASTswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:FEPE_ECOLI
BioCycECOL316407:JW0579-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW0579-MONOMER
BioCycEcoCyc:EG10297-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG10297-MONOMER
DIPDIP-9596Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9596N
DOI10.1021/bi00225a027http://dx.doi.org/10.1021/bi00225a027
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1128/JB.00108-09http://dx.doi.org/10.1128/JB.00108-09
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM60177http://www.ebi.ac.uk/ena/data/view/M60177
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU82598http://www.ebi.ac.uk/ena/data/view/U82598
EMBLX74129http://www.ebi.ac.uk/ena/data/view/X74129
EchoBASEEB0293http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0293
EcoGeneEG10297http://www.ecogene.org/geneInfo.php?eg_id=EG10297
EnsemblBacteriaAAC73688http://www.ensemblgenomes.org/id/AAC73688
EnsemblBacteriaAAC73688http://www.ensemblgenomes.org/id/AAC73688
EnsemblBacteriaBAE76342http://www.ensemblgenomes.org/id/BAE76342
EnsemblBacteriaBAE76342http://www.ensemblgenomes.org/id/BAE76342
EnsemblBacteriaBAE76342http://www.ensemblgenomes.org/id/BAE76342
EnsemblBacteriab0587http://www.ensemblgenomes.org/id/b0587
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0015620http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015620
GO_processGO:0009103http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009103
GO_processGO:0015685http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015685
GO_processGO:0055072http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055072
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0005975http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005975
GOslim_processGO:0006629http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006629
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
GOslim_processGO:0042592http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042592
GeneID945180http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945180
HOGENOMHOG000117856http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000117856&db=HOGENOM6
InParanoidP26266http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P26266
IntActP26266http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P26266*
InterProIPR003856http://www.ebi.ac.uk/interpro/entry/IPR003856
KEGG_Geneecj:JW0579http://www.genome.jp/dbget-bin/www_bget?ecj:JW0579
KEGG_Geneeco:b0587http://www.genome.jp/dbget-bin/www_bget?eco:b0587
OMARKQDAVMhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=RKQDAVM
PSORT-Bswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:FEPE_ECOLI
PSORT2swissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:FEPE_ECOLI
PSORTswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:FEPE_ECOLI
PfamPF02706http://pfam.xfam.org/family/PF02706
Phobiusswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:FEPE_ECOLI
PhylomeDBP26266http://phylomedb.org/?seqid=P26266
ProteinModelPortalP26266http://www.proteinmodelportal.org/query/uniprot/P26266
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed1826089http://www.ncbi.nlm.nih.gov/pubmed/1826089
PubMed19429622http://www.ncbi.nlm.nih.gov/pubmed/19429622
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_415119http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_415119
RefSeqWP_000096692http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000096692
SMRP26266http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P26266
STRING511145.b0587http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b0587&targetmode=cogs
UniProtKB-ACP26266http://www.uniprot.org/uniprot/P26266
UniProtKBFEPE_ECOLIhttp://www.uniprot.org/uniprot/FEPE_ECOLI
chargeswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:FEPE_ECOLI
eggNOGCOG3765http://eggnogapi.embl.de/nog_data/html/tree/COG3765
eggNOGENOG4108QY5http://eggnogapi.embl.de/nog_data/html/tree/ENOG4108QY5
epestfindswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:FEPE_ECOLI
garnierswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:FEPE_ECOLI
helixturnhelixswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:FEPE_ECOLI
hmomentswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:FEPE_ECOLI
iepswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:FEPE_ECOLI
inforesidueswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:FEPE_ECOLI
octanolswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:FEPE_ECOLI
pepcoilswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:FEPE_ECOLI
pepdigestswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:FEPE_ECOLI
pepinfoswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:FEPE_ECOLI
pepnetswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:FEPE_ECOLI
pepstatsswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:FEPE_ECOLI
pepwheelswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:FEPE_ECOLI
pepwindowswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:FEPE_ECOLI
sigcleaveswissprot:FEPE_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:FEPE_ECOLI
DataBaseIDURL or Descriptions
# BioGrid426148766
# EcoGeneEG13989ydjM
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IEA:UniProtKB-KW.
# GO_processGO:0006974cellular response to DNA damage stimulus; IEP:EcoliWiki.
# GO_processGO:0009432SOS response; IEP:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_processGO:0006950response to stress
# InterProIPR007404YdjM-like
# InterProIPR016956YdjM
# OrganismYDJM_ECOLIEscherichia coli (strain K12)
# PATRIC32118763VBIEscCol129921_1799
# PIRH64931H64931
# PIRSFPIRSF030780Md_memb_hyd_prd
# PfamPF04307YdjM
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYDJM_ECOLIInner membrane protein YdjM
# RefSeqNP_416242NC_000913.3
# RefSeqWP_001297653NZ_LN832404.1
# SIMILARITYTo B.subtilis YvsG. {ECO0000305}.
# SUBCELLULAR LOCATIONYDJM_ECOLICell inner membrane; Multi-pass membrane protein.
# eggNOGCOG1988LUCA
# eggNOGENOG4107K5XBacteria
BLASTswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YDJM_ECOLI
BioCycECOL316407:JW5281-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW5281-MONOMER
BioCycEcoCyc:G6933-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G6933-MONOMER
COGCOG1988http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1988
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB3745http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3745
EcoGeneEG13989http://www.ecogene.org/geneInfo.php?eg_id=EG13989
EnsemblBacteriaAAC74798http://www.ensemblgenomes.org/id/AAC74798
EnsemblBacteriaAAC74798http://www.ensemblgenomes.org/id/AAC74798
EnsemblBacteriaBAE76511http://www.ensemblgenomes.org/id/BAE76511
EnsemblBacteriaBAE76511http://www.ensemblgenomes.org/id/BAE76511
EnsemblBacteriaBAE76511http://www.ensemblgenomes.org/id/BAE76511
EnsemblBacteriab1728http://www.ensemblgenomes.org/id/b1728
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_processGO:0006974http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006974
GO_processGO:0009432http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009432
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_processGO:0006950http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006950
GeneID945644http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=945644
HOGENOMHOG000271292http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000271292&db=HOGENOM6
InParanoidP64481http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P64481
InterProIPR007404http://www.ebi.ac.uk/interpro/entry/IPR007404
InterProIPR016956http://www.ebi.ac.uk/interpro/entry/IPR016956
KEGG_Geneecj:JW5281http://www.genome.jp/dbget-bin/www_bget?ecj:JW5281
KEGG_Geneeco:b1728http://www.genome.jp/dbget-bin/www_bget?eco:b1728
KEGG_OrthologyKO:K07038http://www.genome.jp/dbget-bin/www_bget?KO:K07038
PSORT-Bswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YDJM_ECOLI
PSORT2swissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YDJM_ECOLI
PSORTswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YDJM_ECOLI
PfamPF04307http://pfam.xfam.org/family/PF04307
Phobiusswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YDJM_ECOLI
PhylomeDBP64481http://phylomedb.org/?seqid=P64481
ProteinModelPortalP64481http://www.proteinmodelportal.org/query/uniprot/P64481
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416242http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416242
RefSeqWP_001297653http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_001297653
STRING511145.b1728http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b1728&targetmode=cogs
STRINGCOG1988http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG1988&targetmode=cogs
UniProtKB-ACP64481http://www.uniprot.org/uniprot/P64481
UniProtKBYDJM_ECOLIhttp://www.uniprot.org/uniprot/YDJM_ECOLI
chargeswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YDJM_ECOLI
eggNOGCOG1988http://eggnogapi.embl.de/nog_data/html/tree/COG1988
eggNOGENOG4107K5Xhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4107K5X
epestfindswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YDJM_ECOLI
garnierswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YDJM_ECOLI
helixturnhelixswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YDJM_ECOLI
hmomentswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YDJM_ECOLI
iepswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YDJM_ECOLI
inforesidueswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YDJM_ECOLI
octanolswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YDJM_ECOLI
pepcoilswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YDJM_ECOLI
pepdigestswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YDJM_ECOLI
pepinfoswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YDJM_ECOLI
pepnetswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YDJM_ECOLI
pepstatsswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YDJM_ECOLI
pepwheelswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YDJM_ECOLI
pepwindowswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YDJM_ECOLI
sigcleaveswissprot:YDJM_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YDJM_ECOLI
DataBaseIDURL or Descriptions
# BioGrid42607427
# CATALYTIC ACTIVITYARGD_ECOLIN(2)-acetyl-L-ornithine + 2-oxoglutarate = N- acetyl-L-glutamate 5-semialdehyde + L-glutamate. {ECO 0000255|HAMAP-Rule MF_01107, ECO 0000269|PubMed 10074354}.
# CATALYTIC ACTIVITYARGD_ECOLIN-succinyl-L-2,6-diaminoheptanedioate + 2- oxoglutarate = N-succinyl-2-L-amino-6-oxoheptanedioate + L- glutamate. {ECO 0000255|HAMAP-Rule MF_01107, ECO 0000269|PubMed 10074354}.
# CDDcd00610OAT_like
# COFACTORARGD_ECOLIName=pyridoxal 5'-phosphate; Xref=ChEBI CHEBI 597326; Evidence={ECO 0000305|PubMed 10074354}; Note=Binds 1 pyridoxal phosphate per subunit. {ECO 0000305|PubMed 10074354};
# EcoGeneEG10066argD
# FUNCTIONARGD_ECOLIInvolved in both the arginine and lysine biosynthetic pathways. {ECO 0000255|HAMAP-Rule MF_01107, ECO 0000269|PubMed 10074354}.
# GO_componentGO:0005829cytosol; IBA:GO_Central.
# GO_functionARGD_ECOLIGO 0003992 N2-acetyl-L-ornithine 2-oxoglutarate 5-aminotransferase activity; IDA EcoliWiki.
# GO_functionGO:0009016succinyldiaminopimelate transaminase activity; IDA:EcoliWiki.
# GO_functionGO:0030170pyridoxal phosphate binding; IBA:GO_Central.
# GO_functionGO:0042802identical protein binding; IBA:GO_Central.
# GO_processGO:0033359lysine biosynthetic process via diaminopimelate and N-succinyl-2-amino-6-ketopimelate; IGI:EcoCyc.
# GO_processGO:0042450arginine biosynthetic process via ornithine; IGI:EcoCyc.
# GOslim_componentGO:0005829cytosol
# GOslim_functionGO:0003674molecular_function
# GOslim_functionGO:0043167ion binding
# GOslim_processGO:0006520cellular amino acid metabolic process
# GOslim_processGO:0009058biosynthetic process
# Gene3D3.40.640.10-; 1.
# Gene3D3.90.1150.10-; 1.
# HAMAPMF_01107ArgD_aminotrans_3
# IntActP183356
# InterProIPR004636AcOrn/SuccOrn_fam
# InterProIPR005814Aminotrans_3
# InterProIPR015421PyrdxlP-dep_Trfase_major_sub1
# InterProIPR015422PyrdxlP-dep_Trfase_major_sub2
# InterProIPR015424PyrdxlP-dep_Trfase
# InterProIPR017652Ac/SucOrn_transaminase_bac
# KEGG_Briteko00001KEGG Orthology (KO)
# KEGG_Briteko00002 KEGG pathway modules
# KEGG_Briteko01000 Enzymes
# KEGG_Briteko01007 Amino acid related enzymes
# KEGG_Pathwayko00300Lysine biosynthesis
# KEGG_Pathwayko00330Arginine and proline metabolism
# MISCELLANEOUSARGD_ECOLIThe reaction catalyzed by ACOAT is highly reversible. This enzyme may also transaminate ornithine.
# OrganismARGD_ECOLIEscherichia coli (strain K12)
# PANTHERPTHR11986PTHR11986
# PATHWAYARGD_ECOLIAmino-acid biosynthesis; L-arginine biosynthesis; N(2)- acetyl-L-ornithine from L-glutamate step 4/4. {ECO 0000255|HAMAP- Rule MF_01107, ECO 0000269|PubMed 10074354}.
# PATHWAYARGD_ECOLIAmino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; LL-2,6-diaminopimelate from (S)-tetrahydrodipicolinate (succinylase route) step 2/3. {ECO 0000255|HAMAP-Rule MF_01107, ECO 0000269|PubMed 10074354}.
# PATRIC32122152VBIEscCol129921_3453
# PIRB65130B65130
# PROSITEPS00600AA_TRANSFER_CLASS_3
# PfamPF00202Aminotran_3
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameAcetylornithine/succinyldiaminopimelate aminotransferase {ECO:0000255|HAMAP-RuleMF_01107}
# RefSeqNP_417818NC_000913.3
# RefSeqWP_000963792NZ_LN832404.1
# SIMILARITYBelongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. {ECO:0000255|HAMAP- RuleMF_01107}.
# SUBCELLULAR LOCATIONARGD_ECOLICytoplasm {ECO 0000305}.
# SUBUNITHomodimer. {ECO0000305}.
# SUPFAMSSF53383SSF53383
# TIGRFAMsTIGR00707argD
# TIGRFAMsTIGR03246arg_catab_astC
# UniPathwayUPA00034UER00020
# UniPathwayUPA00068UER00109
# eggNOGCOG4992LUCA
# eggNOGENOG4105C8YBacteria
BLASTswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:ARGD_ECOLI
BioCycECOL316407:JW3322-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3322-MONOMER
BioCycEcoCyc:ACETYLORNTRANSAM-MONOMERhttp://biocyc.org/getid?id=EcoCyc:ACETYLORNTRANSAM-MONOMER
BioCycMetaCyc:ACETYLORNTRANSAM-MONOMERhttp://biocyc.org/getid?id=MetaCyc:ACETYLORNTRANSAM-MONOMER
COGCOG4992http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4992
DIPDIP-9138Nhttp://dip.doe-mbi.ucla.edu/dip/Browse.cgi?ID=DIP-9138N
DOI10.1002/elps.1150180807http://dx.doi.org/10.1002/elps.1150180807
DOI10.1016/0378-1119(90)90440-3http://dx.doi.org/10.1016/0378-1119(90)90440-3
DOI10.1021/bi982574ahttp://dx.doi.org/10.1021/bi982574a
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:2.6.1.11 {ECO:0000255|HAMAP-Rule:MF_01107}http://www.genome.jp/dbget-bin/www_bget?EC:2.6.1.11 {ECO:0000255|HAMAP-Rule:MF_01107}
EC_numberEC:2.6.1.17 {ECO:0000255|HAMAP-Rule:MF_01107}http://www.genome.jp/dbget-bin/www_bget?EC:2.6.1.17 {ECO:0000255|HAMAP-Rule:MF_01107}
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM32796http://www.ebi.ac.uk/ena/data/view/M32796
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU18997http://www.ebi.ac.uk/ena/data/view/U18997
ENZYME2.6.1.11 {ECO:0000255|HAMAP-Rule:MF_01107}http://enzyme.expasy.org/EC/2.6.1.11 {ECO:0000255|HAMAP-Rule:MF_01107}
ENZYME2.6.1.17 {ECO:0000255|HAMAP-Rule:MF_01107}http://enzyme.expasy.org/EC/2.6.1.17 {ECO:0000255|HAMAP-Rule:MF_01107}
EchoBASEEB0064http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0064
EcoGeneEG10066http://www.ecogene.org/geneInfo.php?eg_id=EG10066
EnsemblBacteriaAAC76384http://www.ensemblgenomes.org/id/AAC76384
EnsemblBacteriaAAC76384http://www.ensemblgenomes.org/id/AAC76384
EnsemblBacteriaBAE77931http://www.ensemblgenomes.org/id/BAE77931
EnsemblBacteriaBAE77931http://www.ensemblgenomes.org/id/BAE77931
EnsemblBacteriaBAE77931http://www.ensemblgenomes.org/id/BAE77931
EnsemblBacteriab3359http://www.ensemblgenomes.org/id/b3359
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GO_functionGO:0003992http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003992
GO_functionGO:0009016http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009016
GO_functionGO:0030170http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0030170
GO_functionGO:0042802http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042802
GO_processGO:0033359http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0033359
GO_processGO:0042450http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042450
GOslim_componentGO:0005829http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005829
GOslim_functionGO:0003674http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003674
GOslim_functionGO:0043167http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043167
GOslim_processGO:0006520http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006520
GOslim_processGO:0009058http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0009058
Gene3D3.40.640.10http://www.cathdb.info/version/latest/superfamily/3.40.640.10
Gene3D3.90.1150.10http://www.cathdb.info/version/latest/superfamily/3.90.1150.10
GeneID947864http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947864
HAMAPMF_01107http://hamap.expasy.org/unirule/MF_01107
HOGENOMHOG000020206http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000020206&db=HOGENOM6
InParanoidP18335http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P18335
IntActP18335http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P18335*
IntEnz2.6.1.11 {ECO:0000255|HAMAP-Rule:MF_01107}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=2.6.1.11 {ECO:0000255|HAMAP-Rule:MF_01107}
IntEnz2.6.1.17 {ECO:0000255|HAMAP-Rule:MF_01107}http://www.ebi.ac.uk/intenz/query?cmd=Search&q=2.6.1.17 {ECO:0000255|HAMAP-Rule:MF_01107}
InterProIPR004636http://www.ebi.ac.uk/interpro/entry/IPR004636
InterProIPR005814http://www.ebi.ac.uk/interpro/entry/IPR005814
InterProIPR015421http://www.ebi.ac.uk/interpro/entry/IPR015421
InterProIPR015422http://www.ebi.ac.uk/interpro/entry/IPR015422
InterProIPR015424http://www.ebi.ac.uk/interpro/entry/IPR015424
InterProIPR017652http://www.ebi.ac.uk/interpro/entry/IPR017652
KEGG_Briteko00001http://www.genome.jp/dbget-bin/www_bget?ko00001
KEGG_Briteko00002http://www.genome.jp/dbget-bin/www_bget?ko00002
KEGG_Briteko01000http://www.genome.jp/dbget-bin/www_bget?ko01000
KEGG_Briteko01007http://www.genome.jp/dbget-bin/www_bget?ko01007
KEGG_Geneecj:JW3322http://www.genome.jp/dbget-bin/www_bget?ecj:JW3322
KEGG_Geneeco:b3359http://www.genome.jp/dbget-bin/www_bget?eco:b3359
KEGG_OrthologyKO:K00821http://www.genome.jp/dbget-bin/www_bget?KO:K00821
KEGG_Pathwayko00300http://www.genome.jp/kegg-bin/show_pathway?ko00300
KEGG_Pathwayko00330http://www.genome.jp/kegg-bin/show_pathway?ko00330
KEGG_Reactionrn:R02283http://www.genome.jp/dbget-bin/www_bget?rn:R02283
KEGG_Reactionrn:R04475http://www.genome.jp/dbget-bin/www_bget?rn:R04475
OMADFEPLMPhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=DFEPLMP
PANTHERPTHR11986http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11986
PROSITEPS00600http://prosite.expasy.org/cgi-bin/prosite/nicedoc.pl?PS00600
PSORT-Bswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:ARGD_ECOLI
PSORT2swissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:ARGD_ECOLI
PSORTswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:ARGD_ECOLI
PfamPF00202http://pfam.xfam.org/family/PF00202
Phobiusswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:ARGD_ECOLI
PhylomeDBP18335http://phylomedb.org/?seqid=P18335
ProteinModelPortalP18335http://www.proteinmodelportal.org/query/uniprot/P18335
PubMed10074354http://www.ncbi.nlm.nih.gov/pubmed/10074354
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed2199330http://www.ncbi.nlm.nih.gov/pubmed/2199330
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9298646http://www.ncbi.nlm.nih.gov/pubmed/9298646
RefSeqNP_417818http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417818
RefSeqWP_000963792http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000963792
SMRP18335http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P18335
STRING511145.b3359http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3359&targetmode=cogs
STRINGCOG4992http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG4992&targetmode=cogs
SUPFAMSSF53383http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF53383
SWISS-2DPAGEP18335http://world-2dpage.expasy.org/swiss-2dpage/protein/ac=P18335
TIGRFAMsTIGR00707http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00707
TIGRFAMsTIGR03246http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR03246
UniProtKB-ACP18335http://www.uniprot.org/uniprot/P18335
UniProtKBARGD_ECOLIhttp://www.uniprot.org/uniprot/ARGD_ECOLI
chargeswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:ARGD_ECOLI
eggNOGCOG4992http://eggnogapi.embl.de/nog_data/html/tree/COG4992
eggNOGENOG4105C8Yhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4105C8Y
epestfindswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:ARGD_ECOLI
garnierswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:ARGD_ECOLI
helixturnhelixswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:ARGD_ECOLI
hmomentswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:ARGD_ECOLI
iepswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:ARGD_ECOLI
inforesidueswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:ARGD_ECOLI
octanolswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:ARGD_ECOLI
pepcoilswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:ARGD_ECOLI
pepdigestswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:ARGD_ECOLI
pepinfoswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:ARGD_ECOLI
pepnetswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:ARGD_ECOLI
pepstatsswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:ARGD_ECOLI
pepwheelswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:ARGD_ECOLI
pepwindowswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:ARGD_ECOLI
sigcleaveswissprot:ARGD_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:ARGD_ECOLI
DataBaseIDURL or Descriptions
# BioGrid42608863
# EcoGeneEG14100yfbP
# Gene3D1.25.40.10-; 1.
# InterProIPR011990TPR-like_helical_dom
# OrganismYFBP_ECOLIEscherichia coli (strain K12)
# PATRIC32119917VBIEscCol129921_2368
# PIRA64999A64999
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameYFBP_ECOLIUncharacterized protein YfbP
# RefSeqNP_416778NC_000913.3
# RefSeqWP_000767280NZ_LN832404.1
# SEQUENCE CAUTIONSequence=BAE76683.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO0000305};
# SUPFAMSSF48452SSF48452
# eggNOGENOG4106HDCBacteria
# eggNOGENOG410Y787LUCA
BLASTswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:YFBP_ECOLI
BioCycECOL316407:JW2270-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2270-MONOMER
BioCycEcoCyc:G7182-MONOMERhttp://biocyc.org/getid?id=EcoCyc:G7182-MONOMER
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EchoBASEEB3853http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3853
EcoGeneEG14100http://www.ecogene.org/geneInfo.php?eg_id=EG14100
EnsemblBacteriaAAC75335http://www.ensemblgenomes.org/id/AAC75335
EnsemblBacteriaAAC75335http://www.ensemblgenomes.org/id/AAC75335
EnsemblBacteriaBAE76683http://www.ensemblgenomes.org/id/BAE76683
EnsemblBacteriaBAE76683http://www.ensemblgenomes.org/id/BAE76683
EnsemblBacteriaBAE76683http://www.ensemblgenomes.org/id/BAE76683
EnsemblBacteriab2275http://www.ensemblgenomes.org/id/b2275
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
Gene3D1.25.40.10http://www.cathdb.info/version/latest/superfamily/1.25.40.10
GeneID946754http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=946754
HOGENOMHOG000009756http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000009756&db=HOGENOM6
IntActP76486http://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=P76486*
InterProIPR011990http://www.ebi.ac.uk/interpro/entry/IPR011990
KEGG_Geneecj:JW2270http://www.genome.jp/dbget-bin/www_bget?ecj:JW2270
KEGG_Geneeco:b2275http://www.genome.jp/dbget-bin/www_bget?eco:b2275
OMAYANAGEYhttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=YANAGEY
PSORT-Bswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:YFBP_ECOLI
PSORT2swissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:YFBP_ECOLI
PSORTswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:YFBP_ECOLI
Phobiusswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:YFBP_ECOLI
ProteinModelPortalP76486http://www.proteinmodelportal.org/query/uniprot/P76486
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
RefSeqNP_416778http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_416778
RefSeqWP_000767280http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000767280
SMRP76486http://swissmodel.expasy.org/repository/smr.php?sptr_ac=P76486
STRING511145.b2275http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b2275&targetmode=cogs
SUPFAMSSF48452http://supfam.org/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF48452
UniProtKB-ACP76486http://www.uniprot.org/uniprot/P76486
UniProtKBYFBP_ECOLIhttp://www.uniprot.org/uniprot/YFBP_ECOLI
chargeswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:YFBP_ECOLI
eggNOGENOG4106HDChttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4106HDC
eggNOGENOG410Y787http://eggnogapi.embl.de/nog_data/html/tree/ENOG410Y787
epestfindswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:YFBP_ECOLI
garnierswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:YFBP_ECOLI
helixturnhelixswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:YFBP_ECOLI
hmomentswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:YFBP_ECOLI
iepswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:YFBP_ECOLI
inforesidueswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:YFBP_ECOLI
octanolswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:YFBP_ECOLI
pepcoilswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:YFBP_ECOLI
pepdigestswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:YFBP_ECOLI
pepinfoswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:YFBP_ECOLI
pepnetswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:YFBP_ECOLI
pepstatsswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:YFBP_ECOLI
pepwheelswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:YFBP_ECOLI
pepwindowswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:YFBP_ECOLI
sigcleaveswissprot:YFBP_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:YFBP_ECOLI
DataBaseIDURL or Descriptions
# AltNameTTDT_ECOLITartrate carrier
# AltNameTTDT_ECOLITartrate transporter
# BIOPHYSICOCHEMICAL PROPERTIESTTDT_ECOLIKinetic parameters KM=700 uM for tartrate {ECO 0000269|PubMed 17172328}; KM=400 uM for succinate {ECO 0000269|PubMed 17172328}; Vmax=110 umol/min/g enzyme for tartrate import {ECO 0000269|PubMed 17172328}; Vmax=16 umol/min/g enzyme for succinate export {ECO 0000269|PubMed 17172328};
# BioGrid426238610
# EcoGeneEG12393ttdT
# FUNCTIONTTDT_ECOLICatalyzes the uptake of tartrate in exchange for intracellular succinate. Essential for anaerobic L-tartrate fermentation. {ECO 0000269|PubMed 17172328}.
# GO_componentGO:0005886plasma membrane; IDA:EcoCyc.
# GO_componentGO:0016021integral component of membrane; IBA:GO_Central.
# GO_functionGO:0015297antiporter activity; IMP:EcoliWiki.
# GO_processGO:0006814sodium ion transport; IEA:InterPro.
# GO_processGO:0098656anion transmembrane transport; IBA:GO_Central.
# GOslim_componentGO:0005575cellular_component
# GOslim_componentGO:0005886plasma membrane
# GOslim_functionGO:0022857transmembrane transporter activity
# GOslim_processGO:0006810transport
# GOslim_processGO:0055085transmembrane transport
# INDUCTIONInduced by tartrate, via TtdR. {ECO:0000269|PubMed16804186}.
# InterProIPR001898Na/sul_symport
# InterProIPR030676CitT-rel
# KEGG_Briteko02000Transporters
# OrganismTTDT_ECOLIEscherichia coli (strain K12)
# PANTHERPTHR10283:SF13PTHR10283:SF13; 2
# PATRIC32121540VBIEscCol129921_3157
# PIRE65094QQECRS
# PIRSFPIRSF002457DASS
# PfamPF00939Na_sulph_symp
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameTTDT_ECOLIL-tartrate/succinate antiporter
# RefSeqNP_417535NC_000913.3
# RefSeqWP_000804973NZ_LN832404.1
# SEQUENCE CAUTIONSequence=M16194; Type=Frameshift; Positions=35, 51, 132, 245, 268, 443; Evidence={ECO0000305};
# SIMILARITYBelongs to the SLC13A/DASS transporter (TC 2.A.47) family. DIT1 subfamily. {ECO0000305}.
# SUBCELLULAR LOCATIONTTDT_ECOLICell inner membrane; Multi-pass membrane protein.
# TCDB2.A.47.3:the divalent anionna(+) symporter (dass) family
# TIGRFAMsTIGR00785dass
# eggNOGCOG0471LUCA
# eggNOGENOG4107QPKBacteria
BLASTswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:TTDT_ECOLI
BioCycECOL316407:JW3035-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW3035-MONOMER
BioCycEcoCyc:YGJE-MONOMERhttp://biocyc.org/getid?id=EcoCyc:YGJE-MONOMER
BioCycMetaCyc:YGJE-MONOMERhttp://biocyc.org/getid?id=MetaCyc:YGJE-MONOMER
COGCOG0471http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0471
DOI10.1016/0378-1119(87)90303-9http://dx.doi.org/10.1016/0378-1119(87)90303-9
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1093/nar/22.22.4756http://dx.doi.org/10.1093/nar/22.22.4756
DOI10.1099/mic.0.28753-0http://dx.doi.org/10.1099/mic.0.28753-0
DOI10.1126/science.1109730http://dx.doi.org/10.1126/science.1109730
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
DOI10.1128/JB.01402-06http://dx.doi.org/10.1128/JB.01402-06
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLM16194http://www.ebi.ac.uk/ena/data/view/M16194
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU28379http://www.ebi.ac.uk/ena/data/view/U28379
EchoBASEEB2294http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2294
EcoGeneEG12393http://www.ecogene.org/geneInfo.php?eg_id=EG12393
EnsemblBacteriaAAC76099http://www.ensemblgenomes.org/id/AAC76099
EnsemblBacteriaAAC76099http://www.ensemblgenomes.org/id/AAC76099
EnsemblBacteriaBAE77114http://www.ensemblgenomes.org/id/BAE77114
EnsemblBacteriaBAE77114http://www.ensemblgenomes.org/id/BAE77114
EnsemblBacteriaBAE77114http://www.ensemblgenomes.org/id/BAE77114
EnsemblBacteriab3063http://www.ensemblgenomes.org/id/b3063
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GO_componentGO:0016021http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016021
GO_functionGO:0015297http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0015297
GO_processGO:0006814http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006814
GO_processGO:0098656http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0098656
GOslim_componentGO:0005575http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005575
GOslim_componentGO:0005886http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0005886
GOslim_functionGO:0022857http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0022857
GOslim_processGO:0006810http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006810
GOslim_processGO:0055085http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0055085
GeneID947576http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=947576
HOGENOMHOG000117911http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=HOG000117911&db=HOGENOM6
InParanoidP39414http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=P39414
InterProIPR001898http://www.ebi.ac.uk/interpro/entry/IPR001898
InterProIPR030676http://www.ebi.ac.uk/interpro/entry/IPR030676
KEGG_Briteko02000http://www.genome.jp/dbget-bin/www_bget?ko02000
KEGG_Geneecj:JW3035http://www.genome.jp/dbget-bin/www_bget?ecj:JW3035
KEGG_Geneeco:b3063http://www.genome.jp/dbget-bin/www_bget?eco:b3063
KEGG_OrthologyKO:K11106http://www.genome.jp/dbget-bin/www_bget?KO:K11106
OMANAWLYFChttp://omabrowser.org/cgi-bin/gateway.pl?f=DisplayGroup&p1=NAWLYFC
PANTHERPTHR10283:SF13http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10283:SF13
PSORT-Bswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/kpsortb/swissprot:TTDT_ECOLI
PSORT2swissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/kpsort2/swissprot:TTDT_ECOLI
PSORTswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/kpsort/swissprot:TTDT_ECOLI
PfamPF00939http://pfam.xfam.org/family/PF00939
Phobiusswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/kphobius/swissprot:TTDT_ECOLI
PhylomeDBP39414http://phylomedb.org/?seqid=P39414
ProteinModelPortalP39414http://www.proteinmodelportal.org/query/uniprot/P39414
PubMed15919996http://www.ncbi.nlm.nih.gov/pubmed/15919996
PubMed16738553http://www.ncbi.nlm.nih.gov/pubmed/16738553
PubMed16804186http://www.ncbi.nlm.nih.gov/pubmed/16804186
PubMed17172328http://www.ncbi.nlm.nih.gov/pubmed/17172328
PubMed3297921http://www.ncbi.nlm.nih.gov/pubmed/3297921
PubMed7984428http://www.ncbi.nlm.nih.gov/pubmed/7984428
PubMed9278503http://www.ncbi.nlm.nih.gov/pubmed/9278503
PubMed9696764http://www.ncbi.nlm.nih.gov/pubmed/9696764
RefSeqNP_417535http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=NP_417535
RefSeqWP_000804973http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=WP_000804973
STRING511145.b3063http://string-db.org/newstring_cgi/show_network_section.pl?identifier=511145.b3063&targetmode=cogs
STRINGCOG0471http://string-db.org/newstring_cgi/show_network_section.pl?identifier=COG0471&targetmode=cogs
TCDB2.A.47.3http://www.tcdb.org/search/result.php?tc=2.A.47.3
TIGRFAMsTIGR00785http://cmr.jcvi.org/tigr-scripts/CMR/HmmReport.cgi?hmm_acc=TIGR00785
UniProtKB-ACP39414http://www.uniprot.org/uniprot/P39414
UniProtKBTTDT_ECOLIhttp://www.uniprot.org/uniprot/TTDT_ECOLI
chargeswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/charge/swissprot:TTDT_ECOLI
eggNOGCOG0471http://eggnogapi.embl.de/nog_data/html/tree/COG0471
eggNOGENOG4107QPKhttp://eggnogapi.embl.de/nog_data/html/tree/ENOG4107QPK
epestfindswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/epestfind/swissprot:TTDT_ECOLI
garnierswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/garnier/swissprot:TTDT_ECOLI
helixturnhelixswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/helixturnhelix/swissprot:TTDT_ECOLI
hmomentswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/hmoment/swissprot:TTDT_ECOLI
iepswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/iep/swissprot:TTDT_ECOLI
inforesidueswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/inforesidue/swissprot:TTDT_ECOLI
octanolswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/octanol/swissprot:TTDT_ECOLI
pepcoilswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/pepcoil/swissprot:TTDT_ECOLI
pepdigestswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/pepdigest/swissprot:TTDT_ECOLI
pepinfoswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/pepinfo/swissprot:TTDT_ECOLI
pepnetswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/pepnet/swissprot:TTDT_ECOLI
pepstatsswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/pepstats/swissprot:TTDT_ECOLI
pepwheelswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/pepwheel/swissprot:TTDT_ECOLI
pepwindowswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/pepwindow/swissprot:TTDT_ECOLI
sigcleaveswissprot:TTDT_ECOLIhttp://rest.g-language.org/emboss/sigcleave/swissprot:TTDT_ECOLI
DataBaseIDURL or Descriptions
# AltNameEND1_ECOLIEndonuclease I
# BioGrid426235055
# CATALYTIC ACTIVITYEND1_ECOLIEndonucleolytic cleavage to 5'- phosphodinucleotide and 5'-phosphooligonucleotide end-products.
# ENZYME REGULATIONEND1_ECOLIInhibited by RNA.
# EcoGeneEG11336endA
# FUNCTIONEND1_ECOLIHas double-strand break activity.
# GO_componentGO:0042597periplasmic space; IEA:UniProtKB-SubCell.
# GO_functionGO:0004519endonuclease activity; IDA:EcoCyc.
# GO_functionGO:0004530deoxyribonuclease I activity; IEA:UniProtKB-EC.
# GO_functionGO:0016888endodeoxyribonuclease activity, producing 5'-phosphomonoesters; IDA:EcoCyc.
# GO_processGO:0006308DNA catabolic process; IMP:EcoCyc.
# GOslim_componentGO:0005575cellular_component
# GOslim_functionGO:0004518nuclease activity
# GOslim_processGO:0006259DNA metabolic process
# GOslim_processGO:0034655nucleobase-containing compound catabolic process
# InterProIPR007346Endonuclease-I
# KEGG_Briteko01000Enzymes
# OrganismEND1_ECOLIEscherichia coli (strain K12)
# PATRIC32121300VBIEscCol129921_3038
# PIRA38966A38966
# PfamPF04231Endonuclease_1
# ProteomesUP000000318Chromosome
# ProteomesUP000000625Chromosome
# RecNameEND1_ECOLIEndonuclease-1
# RefSeqNP_417420NC_000913.3
# RefSeqWP_000286500NZ_LN832404.1
# SIMILARITYBelongs to the EndA/NucM nuclease family. {ECO0000305}.
# SUBCELLULAR LOCATIONEND1_ECOLIPeriplasm {ECO 0000269|PubMed 4955462}.
# eggNOGCOG2356LUCA
# eggNOGENOG4105RWSBacteria
BLASTswissprot:END1_ECOLIhttp://rest.g-language.org/emboss/kblast/swissprot:END1_ECOLI
BioCycECOL316407:JW2912-MONOMERhttp://biocyc.org/getid?id=ECOL316407:JW2912-MONOMER
BioCycEcoCyc:EG11336-MONOMERhttp://biocyc.org/getid?id=EcoCyc:EG11336-MONOMER
BioCycMetaCyc:EG11336-MONOMERhttp://biocyc.org/getid?id=MetaCyc:EG11336-MONOMER
COGCOG2356http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2356
DOI10.1016/0006-291X(65)90434-1http://dx.doi.org/10.1016/0006-291X(65)90434-1
DOI10.1016/0378-1119(94)00835-Ghttp://dx.doi.org/10.1016/0378-1119(94)00835-G
DOI10.1038/msb4100049http://dx.doi.org/10.1038/msb4100049
DOI10.1126/science.277.5331.1453http://dx.doi.org/10.1126/science.277.5331.1453
EC_numberEC:3.1.21.1http://www.genome.jp/dbget-bin/www_bget?EC:3.1.21.1
EMBLAP009048http://www.ebi.ac.uk/ena/data/view/AP009048
EMBLU00096http://www.ebi.ac.uk/ena/data/view/U00096
EMBLU28377http://www.ebi.ac.uk/ena/data/view/U28377
EMBLX65169http://www.ebi.ac.uk/ena/data/view/X65169
ENZYME3.1.21.1http://enzyme.expasy.org/EC/3.1.21.1
EchoBASEEB1312http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB1312
EcoGeneEG11336http://www.ecogene.org/geneInfo.php?eg_id=EG11336
EnsemblBacteriaAAC75982http://www.ensemblgenomes.org/id/AAC75982
EnsemblBacteriaAAC75982http://www.ensemblgenomes.org/id/AAC75982
EnsemblBacteriaBAE77008http://www.ensemblgenomes.org/id/BAE77008
EnsemblBacteriaBAE77008http://www.ensemblgenomes.org/id/BAE77008
EnsemblBacteriaBAE77008http://www.ensemblgenomes.org/id/BAE77008
EnsemblBacteriab2945http://www.ensemblgenomes.org/id/b2945
G-LinksNC_000913http://link.g-language.org/NC_000913/format=tsv
GO_componentGO:0042597http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0042597
GO_functionGO:0004519http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004519
GO_functionGO:0004530http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0004530
GO_functionGO:0016888http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0016888
GO_processGO:0006308http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006308
GOslim_componen